Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:21:10 (1427678): wrapper (7.7.26015): starting
00:21:10 (1427678): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 00:21:10] Arguments: --nthreads 12
[2025-06-06 00:21:10] Threads: 12
[2025-06-06 00:21:10] Checking for CVMFS
[2025-06-06 00:21:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 00:21:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 00:21:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 00:21:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 00:21:10] 2.12.7.0 16265 3891 65912 146837 0 56 2867732 4096000 394 130560 0 3830449 99.992 946360 152 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 00:21:10] CVMFS is ok
[2025-06-06 00:21:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:21:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 00:21:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 00:21:10] Further information can be found at the LHC@home message board.
[2025-06-06 00:21:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:21:10] Checking for apptainer binary...
[2025-06-06 00:21:10] apptainer is not installed, using version from CVMFS
[2025-06-06 00:21:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:21:10] gg3250
[2025-06-06 00:21:10] apptainer works
[2025-06-06 00:21:10] Set ATHENA_PROC_NUMBER=12
[2025-06-06 00:21:10] Set ATHENA_CORE_NUMBER=12
[2025-06-06 00:21:10] Starting ATLAS job with PandaID=6678365445
[2025-06-06 00:21:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:12:01]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:12:01] 2025-06-06 03:11:48,798 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6678365445/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:12:01] 2025-06-06 03:11:48,798 | INFO     | extracted standard info from prmon json
[2025-06-06 03:12:01] 2025-06-06 03:11:48,798 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:12:01] 2025-06-06 03:11:48,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:12:01] 2025-06-06 03:11:48,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:12:01] 2025-06-06 03:11:48,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:12:01] 2025-06-06 03:11:48,801 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:12:01] 2025-06-06 03:11:48,802 | INFO     | sum of square deviations: 1444149868.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,802 | INFO     | sum of deviations: -23522478095.000008
[2025-06-06 03:12:01] 2025-06-06 03:11:48,803 | INFO     | mean x: 1749174366.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,803 | INFO     | mean y: 2700153.2275449103
[2025-06-06 03:12:01] 2025-06-06 03:11:48,803 | INFO     | -- intersect: 28493452131.449883
[2025-06-06 03:12:01] 2025-06-06 03:11:48,803 | INFO     | intersect: 28493452131.449883
[2025-06-06 03:12:01] 2025-06-06 03:11:48,803 | INFO     | chi2: 1.9504830458612172
[2025-06-06 03:12:01] 2025-06-06 03:11:48,803 | INFO     | sum of square deviations: 1318277740.5
[2025-06-06 03:12:01] 2025-06-06 03:11:48,804 | INFO     | sum of deviations: -11169852617.999996
[2025-06-06 03:12:01] 2025-06-06 03:11:48,804 | INFO     | mean x: 1749174213.5
[2025-06-06 03:12:01] 2025-06-06 03:11:48,804 | INFO     | mean y: 2714789.185185185
[2025-06-06 03:12:01] 2025-06-06 03:11:48,804 | INFO     | -- intersect: 14823581111.77865
[2025-06-06 03:12:01] 2025-06-06 03:11:48,804 | INFO     | intersect: 14823581111.77865
[2025-06-06 03:12:01] 2025-06-06 03:11:48,805 | INFO     | chi2: 1.2498814236286655
[2025-06-06 03:12:01] 2025-06-06 03:11:48,805 | INFO     | current chi2=1.2498814236286655 (change=35.9193905181169 %)
[2025-06-06 03:12:01] 2025-06-06 03:11:48,805 | INFO     | sum of square deviations: 1199940638.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,806 | INFO     | sum of deviations: -10259896098.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,806 | INFO     | mean x: 1749174061.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,806 | INFO     | mean y: 2715962.2165605095
[2025-06-06 03:12:01] 2025-06-06 03:11:48,806 | INFO     | -- intersect: 14958742581.240622
[2025-06-06 03:12:01] 2025-06-06 03:11:48,806 | INFO     | intersect: 14958742581.240622
[2025-06-06 03:12:01] 2025-06-06 03:11:48,806 | INFO     | chi2: 1.249657384674101
[2025-06-06 03:12:01] 2025-06-06 03:11:48,806 | INFO     | current chi2=1.249657384674101 (change=0.01792481673293722 %)
[2025-06-06 03:12:01] 2025-06-06 03:11:48,807 | INFO     | right removable region: 156
[2025-06-06 03:12:01] 2025-06-06 03:11:48,807 | INFO     | sum of square deviations: 1318277740.5
[2025-06-06 03:12:01] 2025-06-06 03:11:48,807 | INFO     | sum of deviations: -43012933416.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,808 | INFO     | mean x: 1749174518.5
[2025-06-06 03:12:01] 2025-06-06 03:11:48,808 | INFO     | mean y: 2723299.345679012
[2025-06-06 03:12:01] 2025-06-06 03:11:48,808 | INFO     | -- intersect: 57075011471.84279
[2025-06-06 03:12:01] 2025-06-06 03:11:48,808 | INFO     | intersect: 57075011471.84279
[2025-06-06 03:12:01] 2025-06-06 03:11:48,808 | INFO     | chi2: 0.7896779399166504
[2025-06-06 03:12:01] 2025-06-06 03:11:48,808 | INFO     | current chi2=0.7896779399166504 (change=59.513724480082544 %)
[2025-06-06 03:12:01] 2025-06-06 03:11:48,808 | INFO     | sum of square deviations: 1199940638.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,809 | INFO     | sum of deviations: -40577805852.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,809 | INFO     | mean x: 1749174671.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,809 | INFO     | mean y: 2720154.108280255
[2025-06-06 03:12:01] 2025-06-06 03:11:48,809 | INFO     | -- intersect: 59153704755.62652
[2025-06-06 03:12:01] 2025-06-06 03:11:48,809 | INFO     | intersect: 59153704755.62652
[2025-06-06 03:12:01] 2025-06-06 03:11:48,810 | INFO     | chi2: 0.789338721705139
[2025-06-06 03:12:01] 2025-06-06 03:11:48,810 | INFO     | current chi2=0.789338721705139 (change=0.042956526245015544 %)
[2025-06-06 03:12:01] 2025-06-06 03:11:48,810 | INFO     | left removable region: 20
[2025-06-06 03:12:01] 2025-06-06 03:11:48,810 | INFO     | sum of square deviations: 779958810.0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,811 | INFO     | sum of deviations: -21692611959.500004
[2025-06-06 03:12:01] 2025-06-06 03:11:48,811 | INFO     | mean x: 1749174640.5
[2025-06-06 03:12:01] 2025-06-06 03:11:48,811 | INFO     | mean y: 2730293.2720588236
[2025-06-06 03:12:01] 2025-06-06 03:11:48,811 | INFO     | -- intersect: 48651666928.48286
[2025-06-06 03:12:01] 2025-06-06 03:11:48,811 | INFO     | intersect: 48651666928.48286
[2025-06-06 03:12:01] 2025-06-06 03:11:48,811 | INFO     | chi2: 0.0638589538167688
[2025-06-06 03:12:01] 2025-06-06 03:11:48,811 | INFO     | -- intersect: 48651666928.48286
[2025-06-06 03:12:01] 2025-06-06 03:11:48,811 | INFO     | current memory leak: -27.81 B/s (using 136 data points, chi2=0.06)
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | ..............................
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | . Timing measurements:
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | . get job = 0 s
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | . initial setup = 12 s
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | . payload setup = 2 s
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | . stage-in = 0 s
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | . payload execution = 10147 s
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | . stage-out = 1 s
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | . log creation = 0 s
[2025-06-06 03:12:01] 2025-06-06 03:11:48,812 | INFO     | ..............................
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | 
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | job summary report
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | --------------------------------------------------
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | PanDA job id: 6678365445
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | task id: 45006595
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | errors: (none)
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | pilot state: finished 
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | transexitcode: 0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | exeerrorcode: 0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | exeerrordiag: 
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | exitcode: 0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | exitmsg: OK
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | cpuconsumptiontime: 34836 s
[2025-06-06 03:12:01] 2025-06-06 03:11:48,859 | INFO     | nevents: 400
[2025-06-06 03:12:01] 2025-06-06 03:11:48,860 | INFO     | neventsw: 0
[2025-06-06 03:12:01] 2025-06-06 03:11:48,860 | INFO     | pid: 1439918
[2025-06-06 03:12:01] 2025-06-06 03:11:48,860 | INFO     | pgrp: 1439918
[2025-06-06 03:12:01] 2025-06-06 03:11:48,860 | INFO     | corecount: 12
[2025-06-06 03:12:01] 2025-06-06 03:11:48,860 | INFO     | event service: False
[2025-06-06 03:12:01] 2025-06-06 03:11:48,860 | INFO     | sizes: {0: 2397365, 1: 2397571, 10: 2397599, 10154: 2426097, 10156: 2435084, 10158: 2435140, 10210: 2435438}
[2025-06-06 03:12:01] 2025-06-06 03:11:48,860 | INFO     | --------------------------------------------------
[2025-06-06 03:12:01] 2025-06-06 03:11:48,860 | INFO     | 
[2025-06-06 03:12:01] 2025-06-06 03:11:48,860 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | job 6678365445 has completed (purged errors)
[2025-06-06 03:12:01] 2025-06-06 03:11:48,871 | INFO     | overall cleanup function is called
[2025-06-06 03:12:01] 2025-06-06 03:11:49,878 | INFO     | --- collectZombieJob: --- 10, [1439918]
[2025-06-06 03:12:01] 2025-06-06 03:11:49,879 | INFO     | zombie collector waiting for pid 1439918
[2025-06-06 03:12:01] 2025-06-06 03:11:49,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:12:01] 2025-06-06 03:11:49,879 | INFO     | collected zombie processes
[2025-06-06 03:12:01] 2025-06-06 03:11:49,879 | INFO     | will attempt to kill all subprocesses of pid=1439918
[2025-06-06 03:12:01] 2025-06-06 03:11:49,921 | INFO     | process IDs to be killed: [1439918] (in reverse order)
[2025-06-06 03:12:01] 2025-06-06 03:11:49,938 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:12:01] 2025-06-06 03:11:49,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:12:01] 2025-06-06 03:11:49,940 | INFO     | did not find any defunct processes belonging to 1439918
[2025-06-06 03:12:01] 2025-06-06 03:11:49,941 | INFO     | did not find any defunct processes belonging to 1439918
[2025-06-06 03:12:01] 2025-06-06 03:11:49,941 | INFO     | ready for new job
[2025-06-06 03:12:01] 2025-06-06 03:11:49,942 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:12:01] 2025-06-06 03:11:49,943 | INFO     | **************************************
[2025-06-06 03:12:01] 2025-06-06 03:11:49,943 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:12:01] 2025-06-06 03:11:49,943 | INFO     | **************************************
[2025-06-06 03:12:01] 2025-06-06 03:11:49,943 | INFO     | 
[2025-06-06 03:12:01] 2025-06-06 03:11:49,967 | INFO     | architecture information:
[2025-06-06 03:12:01] 2025-06-06 03:11:49,967 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:12:01] 2025-06-06 03:11:49,974 | INFO     | cat /etc/os-release:
[2025-06-06 03:12:01] NAME="CentOS Linux"
[2025-06-06 03:12:01] VERSION="7 (Core)"
[2025-06-06 03:12:01] ID="centos"
[2025-06-06 03:12:01] ID_LIKE="rhel fedora"
[2025-06-06 03:12:01] VERSION_ID="7"
[2025-06-06 03:12:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:12:01] ANSI_COLOR="0;31"
[2025-06-06 03:12:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:12:01] HOME_URL="https://www.centos.org/"
[2025-06-06 03:12:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:12:01] 
[2025-06-06 03:12:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:12:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:12:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:12:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:12:01] 
[2025-06-06 03:12:01] 2025-06-06 03:11:49,974 | INFO     | **************************************
[2025-06-06 03:12:01] 2025-06-06 03:11:50,477 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 03:12:01] 2025-06-06 03:11:50,485 | INFO     | sufficient remaining disk space (73088892928 B)
[2025-06-06 03:12:01] 2025-06-06 03:11:50,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:12:01] 2025-06-06 03:11:50,485 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:12:01] 2025-06-06 03:11:50,485 | INFO     | update_server=False
[2025-06-06 03:12:01] 2025-06-06 03:11:50,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:12:01] 2025-06-06 03:11:50,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:12:01] 2025-06-06 03:11:50,485 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 03:12:01] 2025-06-06 03:11:50,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:12:01] 2025-06-06 03:11:50,486 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:12:01] 2025-06-06 03:11:50,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:12:01] 2025-06-06 03:11:50,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:12:01] 2025-06-06 03:11:50,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:12:01] 2025-06-06 03:11:50,499 | INFO     | aborting loop
[2025-06-06 03:12:01] 2025-06-06 03:11:50,879 | INFO     | all data control threads have been joined
[2025-06-06 03:12:01] 2025-06-06 03:11:51,489 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:51,490 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:51,503 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:51,708 | INFO     | all payload control threads have been joined
[2025-06-06 03:12:01] 2025-06-06 03:11:51,723 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:51,885 | INFO     | [data] control thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:52,027 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:52,048 | INFO     | all job control threads have been joined
[2025-06-06 03:12:01] 2025-06-06 03:11:52,090 | INFO     | [job] validate thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:52,347 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:52,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:12:01] 2025-06-06 03:11:52,491 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:52,491 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:52,713 | INFO     | [payload] control thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:52,897 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:52,919 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:52,934 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:53,053 | INFO     | [job] control thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:56,447 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:12:01] 2025-06-06 03:11:56,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140603278047040)>', '<ExcThread(monitor, started 140602238813952)>']
[2025-06-06 03:12:01] 2025-06-06 03:11:57,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:12:01] 2025-06-06 03:11:57,520 | INFO     | [monitor] control thread has ended
[2025-06-06 03:12:01] 2025-06-06 03:12:01,695 | INFO     | all workflow threads have been joined
[2025-06-06 03:12:01] 2025-06-06 03:12:01,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:12:01] 2025-06-06 03:12:01,695 | INFO     | traces error code: 0
[2025-06-06 03:12:01] 2025-06-06 03:12:01,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:12:01] 2025-06-06 03:12:01,760 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:12:01] 2025-06-06 03:12:01,761 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:12:01] 2025-06-06 03:12:01,762 [wrapper] pilotpid: 1431299
[2025-06-06 03:12:01] 2025-06-06 03:12:01,763 [wrapper] Pilot exit status: 0
[2025-06-06 03:12:01] 2025-06-06 03:12:01,767 [wrapper] pandaids: 6678365445
[2025-06-06 03:12:01] 2025-06-06 03:12:01,776 [wrapper] cleanup supervisor_pilot 1485556 1431300
[2025-06-06 03:12:01] 2025-06-06 03:12:01,778 [wrapper] Test setup, not cleaning
[2025-06-06 03:12:01] 2025-06-06 03:12:01,779 [wrapper] apfmon messages muted
[2025-06-06 03:12:01] 2025-06-06 03:12:01,780 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:12:01] 2025-06-06 03:12:01,781 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:12:01]  *** Error codes and diagnostics ***
[2025-06-06 03:12:01]     "exeErrorCode": 0,
[2025-06-06 03:12:01]     "exeErrorDiag": "",
[2025-06-06 03:12:01]     "pilotErrorCode": 0,
[2025-06-06 03:12:01]     "pilotErrorDiag": "",
[2025-06-06 03:12:01]  *** Listing of results directory ***
[2025-06-06 03:12:01] total 394844
[2025-06-06 03:12:01] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:59 pilot3.tar.gz
[2025-06-06 03:12:01] -rwx------ 1 boinc boinc     37140 Jun  4 06:35 runpilot2-wrapper.sh
[2025-06-06 03:12:01] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:35 queuedata.json
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc       100 Jun  6 00:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:12:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 00:21 run_atlas
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc       105 Jun  6 00:21 job.xml
[2025-06-06 03:12:01] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:21 start_atlas.sh
[2025-06-06 03:12:01] drwxrwx--x 2 boinc boinc      4096 Jun  6 00:21 shared
[2025-06-06 03:12:01] -rw-r--r-- 2 boinc boinc    508878 Jun  6 00:21 input.tar.gz
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc      9360 Jun  6 00:21 init_data.xml
[2025-06-06 03:12:01] -rw-r--r-- 2 boinc boinc 217436856 Jun  6 00:21 EVNT.45006593._002180.pool.root.1
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc         0 Jun  6 00:21 boinc_lockfile
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc      2525 Jun  6 00:21 pandaJob.out
[2025-06-06 03:12:01] -rw------- 1 boinc boinc    987721 Jun  6 00:21 agis_schedconf.cvmfs.json
[2025-06-06 03:12:01] -rw------- 1 boinc boinc   1598969 Jun  6 00:21 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:12:01] drwx------ 4 boinc boinc      4096 Jun  6 00:21 pilot3
[2025-06-06 03:12:01] -rw------- 1 boinc boinc 180234629 Jun  6 03:09 HITS.45006595._054476.pool.root.1
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc       530 Jun  6 03:09 boinc_task_state.xml
[2025-06-06 03:12:01] -rw------- 1 boinc boinc      1020 Jun  6 03:10 memory_monitor_summary.json
[2025-06-06 03:12:01] -rw------- 1 boinc boinc    420408 Jun  6 03:10 log.45006595._054476.job.log.tgz.1
[2025-06-06 03:12:01] -rw------- 1 boinc boinc        95 Jun  6 03:11 pilot_heartbeat.json
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc        28 Jun  6 03:11 wrapper_checkpoint.txt
[2025-06-06 03:12:01] -rw------- 1 boinc boinc      7671 Jun  6 03:11 heartbeat.json
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 03:12 boinc_mmap_file
[2025-06-06 03:12:01] -rw------- 1 boinc boinc      4499 Jun  6 03:12 pilotlog.txt
[2025-06-06 03:12:01] -rw------- 1 boinc boinc    979455 Jun  6 03:12 log.45006595._054476.job.log.1
[2025-06-06 03:12:01] -rw------- 1 boinc boinc       357 Jun  6 03:12 output.list
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc       620 Jun  6 03:12 runtime_log
[2025-06-06 03:12:01] -rw------- 1 boinc boinc   1423360 Jun  6 03:12 result.tar.gz
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc      8954 Jun  6 03:12 runtime_log.err
[2025-06-06 03:12:01] -rw------- 1 boinc boinc       652 Jun  6 03:12 blBNDmptwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsXnKDmEHm87n.diag
[2025-06-06 03:12:01] -rw-rw-r-- 1 boinc boinc     21014 Jun  6 03:12 stderr.txt
[2025-06-06 03:12:01] HITS file was successfully produced:
[2025-06-06 03:12:01] -rw------- 1 boinc boinc 180234629 Jun  6 03:09 shared/HITS.pool.root.1
[2025-06-06 03:12:01]  *** Contents of shared directory: ***
[2025-06-06 03:12:01] total 390272
[2025-06-06 03:12:01] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:21 start_atlas.sh
[2025-06-06 03:12:01] -rw-r--r-- 2 boinc boinc    508878 Jun  6 00:21 input.tar.gz
[2025-06-06 03:12:01] -rw-r--r-- 2 boinc boinc 217436856 Jun  6 00:21 ATLAS.root_0
[2025-06-06 03:12:01] -rw------- 1 boinc boinc 180234629 Jun  6 03:09 HITS.pool.root.1
[2025-06-06 03:12:01] -rw------- 1 boinc boinc   1423360 Jun  6 03:12 result.tar.gz
03:12:02 (1427678): run_atlas exited; CPU time 34890.027537
03:12:02 (1427678): called boinc_finish(0)

</stderr_txt>
]]>

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