Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:03:21 (597162): wrapper (7.7.26015): starting
05:03:21 (597162): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 05:03:21] Arguments: --nthreads 10
[2025-06-04 05:03:21] Threads: 10
[2025-06-04 05:03:21] Checking for CVMFS
[2025-06-04 05:03:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:03:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:03:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:03:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:03:22] 2.12.6.0 709574 220553 316432 146773 1 249 17274867 32935937 13351 130560 1 369472497 99.640 358840163 26930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 05:03:22] CVMFS is ok
[2025-06-04 05:03:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:03:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:03:22] Further information can be found at the LHC@home message board.
[2025-06-04 05:03:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:03:22] Checking for apptainer binary...
[2025-06-04 05:03:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:03:22] Running /usr/bin/apptainer --version
[2025-06-04 05:03:22] apptainer version 1.4.1-1.el9
[2025-06-04 05:03:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:03:22] c-5-6.aglt2.org
[2025-06-04 05:03:22] apptainer works
[2025-06-04 05:03:22] Set ATHENA_PROC_NUMBER=10
[2025-06-04 05:03:22] Set ATHENA_CORE_NUMBER=10
[2025-06-04 05:03:22] Starting ATLAS job with PandaID=6678245591
[2025-06-04 05:03:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:23:43]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:23:43]  is_altstaged=None
[2025-06-04 06:23:43]  is_tar=False
[2025-06-04 06:23:43]  lfn=log.45006595._049790.job.log.tgz.1
[2025-06-04 06:23:43]  mtime=0
[2025-06-04 06:23:43]  protocol_id=None
[2025-06-04 06:23:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 06:23:43]  replicas=None
[2025-06-04 06:23:43]  scope=mc23_13p6TeV
[2025-06-04 06:23:43]  status=None
[2025-06-04 06:23:43]  status_code=0
[2025-06-04 06:23:43]  storage_token=
[2025-06-04 06:23:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678245591/log.45006595._049790.job.log.tgz.1
[2025-06-04 06:23:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/d3/log.45006595._049790.job.log.tgz.1
[2025-06-04 06:23:43]  workdir=None
[2025-06-04 06:23:43] ]
[2025-06-04 06:23:43] 2025-06-04 10:23:20,244 | INFO     | transferring file log.45006595._049790.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678245591/log.45006595._049790.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 06:23:43] 2025-06-04 10:23:20,245 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678245591/log.45006595._049790.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._049790.job
[2025-06-04 06:23:43] 2025-06-04 10:23:20,264 | INFO     | adding to output.list: log.45006595._049790.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/d3/log.45006595._049790.job.log.tg
[2025-06-04 06:23:43] 2025-06-04 10:23:20,265 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 06:23:43] 2025-06-04 10:23:20,266 | INFO     | summary of transferred files:
[2025-06-04 06:23:43] 2025-06-04 10:23:20,266 | INFO     |  -- lfn=log.45006595._049790.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 06:23:43] 2025-06-04 10:23:20,266 | INFO     | stage-out finished correctly
[2025-06-04 06:23:43] 2025-06-04 10:23:22,149 | INFO     | monitor loop #351: job 0:6678245591 is in state 'finished'
[2025-06-04 06:23:43] 2025-06-04 10:23:22,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:23:43] 2025-06-04 10:23:23,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 06:23:43] 2025-06-04 10:23:23,869 | INFO     | PID=600768 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 06:23:43] 2025-06-04 10:23:23,869 | INFO     | .. there are 27 such processes running
[2025-06-04 06:23:43] 2025-06-04 10:23:24,636 | INFO     | job 6678245591 has state=finished
[2025-06-04 06:23:43] 2025-06-04 10:23:24,637 | INFO     | preparing for final server update for job 6678245591 in state='finished'
[2025-06-04 06:23:43] 2025-06-04 10:23:24,637 | INFO     | this job has now completed (state=finished)
[2025-06-04 06:23:43] 2025-06-04 10:23:24,637 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:23:43] 2025-06-04 10:23:24,638 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:23:43] 2025-06-04 10:23:24,638 | INFO     | job 6678245591 has finished - writing final server update
[2025-06-04 06:23:43] 2025-06-04 10:23:24,638 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:23:43] 2025-06-04 10:23:24,652 | INFO     | monitor loop #352: job 0:6678245591 is in state 'finished'
[2025-06-04 06:23:43] 2025-06-04 10:23:24,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:23:43] 2025-06-04 10:23:24,654 | INFO     | executing command: lscpu
[2025-06-04 06:23:43] 2025-06-04 10:23:24,726 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:23:43] 2025-06-04 10:23:27,156 | INFO     | monitor loop #353: job 0:6678245591 is in state 'finished'
[2025-06-04 06:23:43] 2025-06-04 10:23:27,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:23:43] 2025-06-04 10:23:28,559 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 06:23:43] 2025-06-04 10:23:28,559 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678245591/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:23:43] 2025-06-04 10:23:28,560 | INFO     | extracted standard info from prmon json
[2025-06-04 06:23:43] 2025-06-04 10:23:28,560 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:23:43] 2025-06-04 10:23:28,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:23:43] 2025-06-04 10:23:28,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:23:43] 2025-06-04 10:23:28,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:23:43] 2025-06-04 10:23:28,562 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:23:43] 2025-06-04 10:23:28,562 | INFO     | sum of square deviations: 110960220.0
[2025-06-04 06:23:43] 2025-06-04 10:23:28,562 | INFO     | sum of deviations: 7834832374.999999
[2025-06-04 06:23:43] 2025-06-04 10:23:28,562 | INFO     | mean x: 1749030280.0
[2025-06-04 06:23:43] 2025-06-04 10:23:28,562 | INFO     | mean y: 2305788.0422535213
[2025-06-04 06:23:43] 2025-06-04 10:23:28,562 | INFO     | -- intersect: -123495638453.59059
[2025-06-04 06:23:43] 2025-06-04 10:23:28,562 | INFO     | intersect: -123495638453.59059
[2025-06-04 06:23:43] 2025-06-04 10:23:28,563 | INFO     | chi2: 0.6787161358917297
[2025-06-04 06:23:43] 2025-06-04 10:23:28,563 | INFO     | -- intersect: -123495638453.59059
[2025-06-04 06:23:43] 2025-06-04 10:23:28,563 | INFO     | current memory leak: 70.61 B/s (using 71 data points, chi2=0.68)
[2025-06-04 06:23:43] 2025-06-04 10:23:28,563 | INFO     | ..............................
[2025-06-04 06:23:43] 2025-06-04 10:23:28,563 | INFO     | . Timing measurements:
[2025-06-04 06:23:43] 2025-06-04 10:23:28,563 | INFO     | . get job = 0 s
[2025-06-04 06:23:43] 2025-06-04 10:23:28,563 | INFO     | . initial setup = 2 s
[2025-06-04 06:23:43] 2025-06-04 10:23:28,563 | INFO     | . payload setup = 7 s
[2025-06-04 06:23:43] 2025-06-04 10:23:28,563 | INFO     | . stage-in = 0 s
[2025-06-04 06:23:43] 2025-06-04 10:23:28,564 | INFO     | . payload execution = 4759 s
[2025-06-04 06:23:43] 2025-06-04 10:23:28,564 | INFO     | . stage-out = 0 s
[2025-06-04 06:23:43] 2025-06-04 10:23:28,564 | INFO     | . log creation = 0 s
[2025-06-04 06:23:43] 2025-06-04 10:23:28,564 | INFO     | ..............................
[2025-06-04 06:23:43] 2025-06-04 10:23:28,927 | INFO     | 
[2025-06-04 06:23:43] 2025-06-04 10:23:28,927 | INFO     | job summary report
[2025-06-04 06:23:43] 2025-06-04 10:23:28,927 | INFO     | --------------------------------------------------
[2025-06-04 06:23:43] 2025-06-04 10:23:28,927 | INFO     | PanDA job id: 6678245591
[2025-06-04 06:23:43] 2025-06-04 10:23:28,927 | INFO     | task id: 45006595
[2025-06-04 06:23:43] 2025-06-04 10:23:28,928 | INFO     | errors: (none)
[2025-06-04 06:23:43] 2025-06-04 10:23:28,928 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:23:43] 2025-06-04 10:23:28,928 | INFO     | pilot state: finished 
[2025-06-04 06:23:43] 2025-06-04 10:23:28,928 | INFO     | transexitcode: 0
[2025-06-04 06:23:43] 2025-06-04 10:23:28,928 | INFO     | exeerrorcode: 0
[2025-06-04 06:23:43] 2025-06-04 10:23:28,928 | INFO     | exeerrordiag: 
[2025-06-04 06:23:43] 2025-06-04 10:23:28,928 | INFO     | exitcode: 0
[2025-06-04 06:23:43] 2025-06-04 10:23:28,928 | INFO     | exitmsg: OK
[2025-06-04 06:23:43] 2025-06-04 10:23:28,928 | INFO     | cpuconsumptiontime: 40430 s
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | nevents: 400
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | neventsw: 0
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | pid: 607231
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | pgrp: 607231
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | corecount: 10
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | event service: False
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 4770: 2431471, 4771: 2440412, 4774: 2440596, 4779: 2440766}
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | --------------------------------------------------
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | 
[2025-06-04 06:23:43] 2025-06-04 10:23:28,929 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 06:23:43] 2025-06-04 10:23:28,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:23:43] 2025-06-04 10:23:28,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:23:43] 2025-06-04 10:23:28,953 | INFO     | job 6678245591 has completed (purged errors)
[2025-06-04 06:23:43] 2025-06-04 10:23:28,953 | INFO     | overall cleanup function is called
[2025-06-04 06:23:43] 2025-06-04 10:23:29,961 | INFO     | --- collectZombieJob: --- 10, [607231]
[2025-06-04 06:23:43] 2025-06-04 10:23:29,961 | INFO     | zombie collector waiting for pid 607231
[2025-06-04 06:23:43] 2025-06-04 10:23:29,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:23:43] 2025-06-04 10:23:29,962 | INFO     | collected zombie processes
[2025-06-04 06:23:43] 2025-06-04 10:23:29,962 | INFO     | will attempt to kill all subprocesses of pid=607231
[2025-06-04 06:23:43] 2025-06-04 10:23:30,186 | INFO     | process IDs to be killed: [607231] (in reverse order)
[2025-06-04 06:23:43] 2025-06-04 10:23:30,291 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:23:43] 2025-06-04 10:23:30,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:23:43] 2025-06-04 10:23:30,304 | INFO     | did not find any defunct processes belonging to 607231
[2025-06-04 06:23:43] 2025-06-04 10:23:30,317 | INFO     | did not find any defunct processes belonging to 607231
[2025-06-04 06:23:43] 2025-06-04 10:23:30,317 | INFO     | ready for new job
[2025-06-04 06:23:43] 2025-06-04 10:23:30,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:23:43] 2025-06-04 10:23:30,320 | INFO     | **************************************
[2025-06-04 06:23:43] 2025-06-04 10:23:30,320 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:23:43] 2025-06-04 10:23:30,320 | INFO     | **************************************
[2025-06-04 06:23:43] 2025-06-04 10:23:30,320 | INFO     | 
[2025-06-04 06:23:43] 2025-06-04 10:23:30,334 | INFO     | architecture information:
[2025-06-04 06:23:43] 2025-06-04 10:23:30,334 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:23:43] 2025-06-04 10:23:30,349 | INFO     | cat /etc/os-release:
[2025-06-04 06:23:43] NAME="CentOS Linux"
[2025-06-04 06:23:43] VERSION="7 (Core)"
[2025-06-04 06:23:43] ID="centos"
[2025-06-04 06:23:43] ID_LIKE="rhel fedora"
[2025-06-04 06:23:43] VERSION_ID="7"
[2025-06-04 06:23:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:23:43] ANSI_COLOR="0;31"
[2025-06-04 06:23:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:23:43] HOME_URL="https://www.centos.org/"
[2025-06-04 06:23:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:23:43] 
[2025-06-04 06:23:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:23:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:23:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:23:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:23:43] 
[2025-06-04 06:23:43] 2025-06-04 10:23:30,349 | INFO     | **************************************
[2025-06-04 06:23:43] 2025-06-04 10:23:30,852 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 06:23:43] 2025-06-04 10:23:30,869 | INFO     | sufficient remaining disk space (76517736448 B)
[2025-06-04 06:23:43] 2025-06-04 10:23:30,869 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:23:43] 2025-06-04 10:23:30,869 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:23:43] 2025-06-04 10:23:30,869 | INFO     | update_server=False
[2025-06-04 06:23:43] 2025-06-04 10:23:30,870 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:23:43] 2025-06-04 10:23:30,870 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:23:43] 2025-06-04 10:23:30,870 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:23:43] 2025-06-04 10:23:30,871 | INFO     | aborting loop
[2025-06-04 06:23:43] 2025-06-04 10:23:30,871 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:23:43] 2025-06-04 10:23:30,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:23:43] 2025-06-04 10:23:30,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:23:43] 2025-06-04 10:23:30,895 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:23:43] 2025-06-04 10:23:31,200 | INFO     | all data control threads have been joined
[2025-06-04 06:23:43] 2025-06-04 10:23:31,308 | INFO     | all job control threads have been joined
[2025-06-04 06:23:43] 2025-06-04 10:23:31,607 | INFO     | all payload control threads have been joined
[2025-06-04 06:23:43] 2025-06-04 10:23:31,873 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:31,877 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:32,205 | INFO     | [data] control thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:32,223 | INFO     | [job] validate thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:32,224 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:32,294 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:32,313 | INFO     | [job] control thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:32,612 | INFO     | [payload] control thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:32,755 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:32,900 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:33,127 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:33,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:33,192 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:33,369 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:33,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:23:43] 2025-06-04 10:23:33,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:23:43] 2025-06-04 10:23:34,644 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:37,951 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:23:43] 2025-06-04 10:23:38,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819077699392)>', '<ExcThread(monitor, started 139818726041344)>']
[2025-06-04 06:23:43] 2025-06-04 10:23:38,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:23:43] 2025-06-04 10:23:38,904 | INFO     | [monitor] control thread has ended
[2025-06-04 06:23:43] 2025-06-04 10:23:43,618 | INFO     | all workflow threads have been joined
[2025-06-04 06:23:43] 2025-06-04 10:23:43,618 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:23:43] 2025-06-04 10:23:43,619 | INFO     | traces error code: 0
[2025-06-04 06:23:43] 2025-06-04 10:23:43,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:23:43] 2025-06-04 10:23:43,818 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:23:43] 2025-06-04 10:23:43,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:23:43] 2025-06-04 10:23:43,823 [wrapper] pilotpid: 600768
[2025-06-04 06:23:43] 2025-06-04 10:23:43,826 [wrapper] Pilot exit status: 0
[2025-06-04 06:23:43] 2025-06-04 10:23:43,836 [wrapper] pandaids: 6678245591
[2025-06-04 06:23:43] 2025-06-04 10:23:43,903 [wrapper] cleanup supervisor_pilot  948518 600769
[2025-06-04 06:23:43] 2025-06-04 10:23:43,906 [wrapper] Test setup, not cleaning
[2025-06-04 06:23:43] 2025-06-04 10:23:43,909 [wrapper] apfmon messages muted
[2025-06-04 06:23:43] 2025-06-04 10:23:43,913 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:23:43] 2025-06-04 10:23:43,916 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:23:43]  *** Error codes and diagnostics ***
[2025-06-04 06:23:43]     "exeErrorCode": 0,
[2025-06-04 06:23:43]     "exeErrorDiag": "",
[2025-06-04 06:23:43]     "pilotErrorCode": 0,
[2025-06-04 06:23:43]     "pilotErrorDiag": "",
[2025-06-04 06:23:43]  *** Listing of results directory ***
[2025-06-04 06:23:43] total 390916
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 20:59 pilot3.tar.gz
[2025-06-04 06:23:43] -rwx------. 1 boincer umatlas     37140 Jun  3 21:16 runpilot2-wrapper.sh
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 21:16 queuedata.json
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas       100 Jun  4 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:23:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 05:03 run_atlas
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas       105 Jun  4 05:03 job.xml
[2025-06-04 06:23:43] -rw-r--r--. 2 boincer umatlas 216695903 Jun  4 05:03 EVNT.45006593._001996.pool.root.1
[2025-06-04 06:23:43] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 05:03 input.tar.gz
[2025-06-04 06:23:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:03 start_atlas.sh
[2025-06-04 06:23:43] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 05:03 shared
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas         0 Jun  4 05:03 boinc_lockfile
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 05:03 pandaJob.out
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas    986774 Jun  4 05:03 agis_schedconf.cvmfs.json
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas   1603667 Jun  4 05:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:23:43] drwx------. 4 boincer umatlas      4096 Jun  4 05:03 pilot3
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas      6671 Jun  4 06:19 init_data.xml
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas 178142193 Jun  4 06:22 HITS.45006595._049790.pool.root.1
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas       529 Jun  4 06:22 boinc_task_state.xml
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas        95 Jun  4 06:23 pilot_heartbeat.json
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas      1052 Jun  4 06:23 memory_monitor_summary.json
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas    347439 Jun  4 06:23 log.45006595._049790.job.log.tgz.1
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas        27 Jun  4 06:23 wrapper_checkpoint.txt
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 06:23 boinc_mmap_file
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas      7715 Jun  4 06:23 heartbeat.json
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas      4476 Jun  4 06:23 pilotlog.txt
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas    465690 Jun  4 06:23 log.45006595._049790.job.log.1
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas       357 Jun  4 06:23 output.list
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas       620 Jun  4 06:23 runtime_log
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas    829440 Jun  4 06:23 result.tar.gz
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas      8646 Jun  4 06:23 runtime_log.err
[2025-06-04 06:23:43] -rw-------. 1 boincer umatlas       650 Jun  4 06:23 HtGNDmRvrg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWlmKDmyCAcTn.diag
[2025-06-04 06:23:43] -rw-r--r--. 1 boincer umatlas     21523 Jun  4 06:23 stderr.txt
[2025-06-04 06:23:44] HITS file was successfully produced:
[2025-06-04 06:23:44] -rw-------. 1 boincer umatlas 178142193 Jun  4 06:22 shared/HITS.pool.root.1
[2025-06-04 06:23:44]  *** Contents of shared directory: ***
[2025-06-04 06:23:44] total 386924
[2025-06-04 06:23:44] -rw-r--r--. 2 boincer umatlas 216695903 Jun  4 05:03 ATLAS.root_0
[2025-06-04 06:23:44] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 05:03 input.tar.gz
[2025-06-04 06:23:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:03 start_atlas.sh
[2025-06-04 06:23:44] -rw-------. 1 boincer umatlas 178142193 Jun  4 06:22 HITS.pool.root.1
[2025-06-04 06:23:44] -rw-------. 1 boincer umatlas    829440 Jun  4 06:23 result.tar.gz
06:24:06 (597162): run_atlas exited; CPU time 40566.620885
06:24:06 (597162): called boinc_finish(0)

</stderr_txt>
]]>

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