Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:04:01 (518262): wrapper (7.7.26015): starting
02:04:01 (518262): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 02:04:01] Arguments: --nthreads 12
[2025-06-04 02:04:01] Threads: 12
[2025-06-04 02:04:01] Checking for CVMFS
[2025-06-04 02:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:04:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:04:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:04:02] 2.11.5.0 2109152 23395 325068 146773 3 848 37731010 45568001 20026 130560 0 279725097 99.849 131384641 27046 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 02:04:02] CVMFS is ok
[2025-06-04 02:04:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:04:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:04:02] Further information can be found at the LHC@home message board.
[2025-06-04 02:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:04:02] Checking for apptainer binary...
[2025-06-04 02:04:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:04:02] Running /usr/bin/apptainer --version
[2025-06-04 02:04:02] apptainer version 1.4.0-1.el9
[2025-06-04 02:04:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:04:02] wns0078.triumf.lcg
[2025-06-04 02:04:02] apptainer works
[2025-06-04 02:04:02] Set ATHENA_PROC_NUMBER=12
[2025-06-04 02:04:02] Set ATHENA_CORE_NUMBER=12
[2025-06-04 02:04:02] Starting ATLAS job with PandaID=6678365347
[2025-06-04 02:04:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:07:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:07:39] 2025-06-04 09:07:26,237 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:07:39] 2025-06-04 09:07:26,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | WARNING  | found no stored workdir sizes
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | WARNING  | wrong length of table data, x=[1749027896.0], y=[1137.0] (must be same and length>=4)
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | ..............................
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . Timing measurements:
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . get job = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . initial setup = 3 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . payload setup = 11 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . stage-in = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . payload execution = 25 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . stage-out = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . log creation = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | ..............................
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678365347/pilotlog.txt
[2025-06-04 02:07:39] 2025-06-04 09:07:26,296 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 02:07:39] - Log from pilotlog.txt -
[2025-06-04 02:07:39] 2025-06-04 09:07:26,237 | INFO     | extracted standard info from prmon json
[2025-06-04 02:07:39] 2025-06-04 09:07:26,237 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:07:39] 2025-06-04 09:07:26,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | WARNING  | found no stored workdir sizes
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | WARNING  | wrong length of table data, x=[1749027896.0], y=[1137.0] (must be same and length>=4)
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | ..............................
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . Timing measurements:
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . get job = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . initial setup = 3 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . payload setup = 11 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . stage-in = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . payload execution = 25 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . stage-out = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . log creation = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | ..............................
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678365347/pilotlog.txt
[2025-06-04 02:07:39] 2025-06-04 09:07:26,297 | WARNING  | 
[2025-06-04 02:07:39] [begin log extracts]
[2025-06-04 02:07:39] - Log from pilotlog.txt -
[2025-06-04 02:07:39] 2025-06-04 09:07:26,237 | INFO     | extracted standard info from prmon json
[2025-06-04 02:07:39] 2025-06-04 09:07:26,237 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:07:39] 2025-06-04 09:07:26,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | WARNING  | found no stored workdir sizes
[2025-06-04 02:07:39] 2025-06-04 09:07:26,238 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | WARNING  | wrong length of table data, x=[1749027896.0], y=[1137.0] (must be same and length>=4)
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | ..............................
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . Timing measurements:
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . get job = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . initial setup = 3 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . payload setup = 11 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . stage-in = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . payload execution = 25 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . stage-out = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | . log creation = 0 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | ..............................
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 02:07:39] 2025-06-04 09:07:26,239 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678365347/pilotlog.txt
[2025-06-04 02:07:39] [end log extracts]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,297 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 02:07:39] 2025-06-04 09:07:26,297 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 02:07:39] 2025-06-04 09:07:26,901 | INFO     | 
[2025-06-04 02:07:39] 2025-06-04 09:07:26,901 | INFO     | job summary report
[2025-06-04 02:07:39] 2025-06-04 09:07:26,901 | INFO     | --------------------------------------------------
[2025-06-04 02:07:39] 2025-06-04 09:07:26,901 | INFO     | PanDA job id: 6678365347
[2025-06-04 02:07:39] 2025-06-04 09:07:26,901 | INFO     | task id: 45006595
[2025-06-04 02:07:39] 2025-06-04 09:07:26,901 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 02:05:09,134 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 02:07:39] 2025-06-04 09:07:26,901 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:07:39] 2025-06-04 09:07:26,901 | INFO     | pilot state: failed 
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | transexitcode: 65
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | exeerrorcode: 65
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | exitcode: 65
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | cpuconsumptiontime: 17 s
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | nevents: 0
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | neventsw: 0
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | pid: 543230
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | pgrp: 543230
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | corecount: 12
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | event service: False
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | sizes: {0: 2405180, 1: 2405180, 8: 2405414, 11: 2405442, 41: 2432909, 45: 2432909, 170: 2433179}
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | --------------------------------------------------
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | 
[2025-06-04 02:07:39] 2025-06-04 09:07:26,902 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 02:07:39] 2025-06-04 09:07:26,944 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,944 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:07:39] 2025-06-04 09:07:26,945 | INFO     | job 6678365347 has completed (purged errors)
[2025-06-04 02:07:39] 2025-06-04 09:07:26,946 | INFO     | overall cleanup function is called
[2025-06-04 02:07:39] 2025-06-04 09:07:27,952 | INFO     | --- collectZombieJob: --- 10, [543230]
[2025-06-04 02:07:39] 2025-06-04 09:07:27,957 | INFO     | zombie collector waiting for pid 543230
[2025-06-04 02:07:39] 2025-06-04 09:07:27,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:07:39] 2025-06-04 09:07:27,957 | INFO     | collected zombie processes
[2025-06-04 02:07:39] 2025-06-04 09:07:27,957 | INFO     | will attempt to kill all subprocesses of pid=543230
[2025-06-04 02:07:39] 2025-06-04 09:07:28,325 | INFO     | process IDs to be killed: [543230] (in reverse order)
[2025-06-04 02:07:39] 2025-06-04 09:07:28,515 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:07:39] 2025-06-04 09:07:28,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:07:39] 2025-06-04 09:07:28,525 | INFO     | did not find any defunct processes belonging to 543230
[2025-06-04 02:07:39] 2025-06-04 09:07:28,533 | INFO     | did not find any defunct processes belonging to 543230
[2025-06-04 02:07:39] 2025-06-04 09:07:28,534 | INFO     | ready for new job
[2025-06-04 02:07:39] 2025-06-04 09:07:28,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:07:39] 2025-06-04 09:07:28,535 | INFO     | **************************************
[2025-06-04 02:07:39] 2025-06-04 09:07:28,535 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:07:39] 2025-06-04 09:07:28,535 | INFO     | **************************************
[2025-06-04 02:07:39] 2025-06-04 09:07:28,535 | INFO     | 
[2025-06-04 02:07:39] 2025-06-04 09:07:28,537 | INFO     | architecture information:
[2025-06-04 02:07:39] 2025-06-04 09:07:28,537 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:07:39] 2025-06-04 09:07:28,549 | INFO     | cat /etc/os-release:
[2025-06-04 02:07:39] NAME="CentOS Linux"
[2025-06-04 02:07:39] VERSION="7 (Core)"
[2025-06-04 02:07:39] ID="centos"
[2025-06-04 02:07:39] ID_LIKE="rhel fedora"
[2025-06-04 02:07:39] VERSION_ID="7"
[2025-06-04 02:07:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:07:39] ANSI_COLOR="0;31"
[2025-06-04 02:07:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:07:39] HOME_URL="https://www.centos.org/"
[2025-06-04 02:07:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:07:39] 
[2025-06-04 02:07:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:07:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:07:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:07:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:07:39] 
[2025-06-04 02:07:39] 2025-06-04 09:07:28,550 | INFO     | **************************************
[2025-06-04 02:07:39] 2025-06-04 09:07:29,054 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 02:07:39] 2025-06-04 09:07:29,071 | INFO     | sufficient remaining disk space (1595241660416 B)
[2025-06-04 02:07:39] 2025-06-04 09:07:29,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:07:39] 2025-06-04 09:07:29,072 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:07:39] 2025-06-04 09:07:29,072 | INFO     | update_server=False
[2025-06-04 02:07:39] 2025-06-04 09:07:29,072 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:07:39] 2025-06-04 09:07:29,072 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:07:39] 2025-06-04 09:07:29,073 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:07:39] 2025-06-04 09:07:29,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:07:39] 2025-06-04 09:07:29,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:07:39] 2025-06-04 09:07:29,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:07:39] 2025-06-04 09:07:29,073 | INFO     | aborting loop
[2025-06-04 02:07:39] 2025-06-04 09:07:29,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:07:39] 2025-06-04 09:07:29,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:07:39] 2025-06-04 09:07:29,193 | INFO     | all data control threads have been joined
[2025-06-04 02:07:39] 2025-06-04 09:07:29,552 | INFO     | all job control threads have been joined
[2025-06-04 02:07:39] 2025-06-04 09:07:29,913 | INFO     | all payload control threads have been joined
[2025-06-04 02:07:39] 2025-06-04 09:07:30,078 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:30,078 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:30,092 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:30,196 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:30,199 | INFO     | [data] control thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:30,558 | INFO     | [job] control thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:30,782 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:30,906 | INFO     | [job] validate thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:30,920 | INFO     | [payload] control thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:31,059 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:31,077 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:31,092 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:31,358 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:31,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:07:39] 2025-06-04 09:07:31,542 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:32,478 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:33,091 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:07:39] 2025-06-04 09:07:33,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864041957184)>', '<ExcThread(monitor, started 139862984353536)>']
[2025-06-04 02:07:39] 2025-06-04 09:07:34,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:07:39] 2025-06-04 09:07:34,102 | INFO     | [monitor] control thread has ended
[2025-06-04 02:07:39] 2025-06-04 09:07:38,941 | INFO     | all workflow threads have been joined
[2025-06-04 02:07:39] 2025-06-04 09:07:38,941 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:07:39] 2025-06-04 09:07:38,941 | INFO     | traces error code: 0
[2025-06-04 02:07:39] 2025-06-04 09:07:38,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:07:39] 2025-06-04 09:07:39,068 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:07:39] 2025-06-04 09:07:39,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:07:39] 2025-06-04 09:07:39,072 [wrapper] pilotpid: 528884
[2025-06-04 02:07:39] 2025-06-04 09:07:39,073 [wrapper] Pilot exit status: 0
[2025-06-04 02:07:39] 2025-06-04 09:07:39,083 [wrapper] pandaids: 6678365347
[2025-06-04 02:07:39] 2025-06-04 09:07:39,137 [wrapper] cleanup supervisor_pilot  528890 528885
[2025-06-04 02:07:39] 2025-06-04 09:07:39,139 [wrapper] Test setup, not cleaning
[2025-06-04 02:07:39] 2025-06-04 09:07:39,142 [wrapper] apfmon messages muted
[2025-06-04 02:07:39] 2025-06-04 09:07:39,144 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:07:39] 2025-06-04 09:07:39,146 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:07:39]  *** Error codes and diagnostics ***
[2025-06-04 02:07:39]     "exeErrorCode": 65,
[2025-06-04 02:07:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 02:07:39]     "pilotErrorCode": 1305,
[2025-06-04 02:07:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 02:07:39]  *** Listing of results directory ***
[2025-06-04 02:07:39] total 213928
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:59 pilot3.tar.gz
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc      5111 Jun  3 23:31 queuedata.json
[2025-06-04 02:07:39] -rwx------. 1 boinc boinc     37140 Jun  3 23:32 runpilot2-wrapper.sh
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:07:39] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:04 run_atlas
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:04 job.xml
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc      6600 Jun  4 02:04 init_data.xml
[2025-06-04 02:07:39] -rw-r--r--. 2 boinc boinc 215037831 Jun  4 02:04 EVNT.45006593._002176.pool.root.1
[2025-06-04 02:07:39] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:04 start_atlas.sh
[2025-06-04 02:07:39] drwxrwx--x. 2 boinc boinc      4096 Jun  4 02:04 shared
[2025-06-04 02:07:39] -rw-r--r--. 2 boinc boinc    508882 Jun  4 02:04 input.tar.gz
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:04 boinc_lockfile
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc      2524 Jun  4 02:04 pandaJob.out
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc    986774 Jun  4 02:04 agis_schedconf.cvmfs.json
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc   1603667 Jun  4 02:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:07:39] drwx------. 4 boinc boinc      4096 Jun  4 02:04 pilot3
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc       522 Jun  4 02:05 boinc_task_state.xml
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc       994 Jun  4 02:05 memory_monitor_summary.json
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc     20339 Jun  4 02:05 log.45006595._054378.job.log.tgz.1
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc        95 Jun  4 02:07 pilot_heartbeat.json
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc      8358 Jun  4 02:07 heartbeat.json
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc      4475 Jun  4 02:07 pilotlog.txt
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc      8192 Jun  4 02:07 boinc_mmap_file
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc     74689 Jun  4 02:07 log.45006595._054378.job.log.1
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc       188 Jun  4 02:07 output.list
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc       620 Jun  4 02:07 runtime_log
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc    112640 Jun  4 02:07 result.tar.gz
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc       644 Jun  4 02:07 zOwMDm4qwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMXnKDm3gq55n.diag
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc      8484 Jun  4 02:07 runtime_log.err
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc        22 Jun  4 02:07 wrapper_checkpoint.txt
[2025-06-04 02:07:39] -rw-r--r--. 1 boinc boinc     21475 Jun  4 02:07 stderr.txt
[2025-06-04 02:07:39] No HITS result produced
[2025-06-04 02:07:39]  *** Contents of shared directory: ***
[2025-06-04 02:07:39] total 210632
[2025-06-04 02:07:39] -rw-r--r--. 2 boinc boinc 215037831 Jun  4 02:04 ATLAS.root_0
[2025-06-04 02:07:39] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:04 start_atlas.sh
[2025-06-04 02:07:39] -rw-r--r--. 2 boinc boinc    508882 Jun  4 02:04 input.tar.gz
[2025-06-04 02:07:39] -rw-------. 1 boinc boinc    112640 Jun  4 02:07 result.tar.gz
02:07:41 (518262): run_atlas exited; CPU time 22.455251
02:07:41 (518262): called boinc_finish(0)

</stderr_txt>
]]>

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