Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:54:42 (27093): wrapper (7.7.26015): starting
04:54:42 (27093): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 04:54:42] Arguments: --nthreads 12
[2025-06-04 04:54:42] Threads: 12
[2025-06-04 04:54:42] Checking for CVMFS
[2025-06-04 04:54:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:54:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:54:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:54:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:54:42] 2.11.2.0 3297 35422 85332 146773 2 58 17535830 20275200 1 130560 0 15576194 99.983 6114465 7543 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 04:54:42] CVMFS is ok
[2025-06-04 04:54:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:54:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:54:42] Further information can be found at the LHC@home message board.
[2025-06-04 04:54:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:54:42] Checking for apptainer binary...
[2025-06-04 04:54:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:54:42] Running /usr/bin/apptainer --version
[2025-06-04 04:54:42] apptainer version 1.3.2-1.el7
[2025-06-04 04:54:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:54:43] c-205-22.aglt2.org
[2025-06-04 04:54:43] apptainer works
[2025-06-04 04:54:43] Set ATHENA_PROC_NUMBER=12
[2025-06-04 04:54:43] Set ATHENA_CORE_NUMBER=12
[2025-06-04 04:54:43] Starting ATLAS job with PandaID=6678365314
[2025-06-04 04:54:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:01:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:01:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 06:01:22]  is_altstaged=None
[2025-06-04 06:01:22]  is_tar=False
[2025-06-04 06:01:22]  lfn=log.45006595._054345.job.log.tgz.1
[2025-06-04 06:01:22]  mtime=0
[2025-06-04 06:01:22]  protocol_id=None
[2025-06-04 06:01:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 06:01:22]  replicas=None
[2025-06-04 06:01:22]  scope=mc23_13p6TeV
[2025-06-04 06:01:22]  status=None
[2025-06-04 06:01:22]  status_code=0
[2025-06-04 06:01:22]  storage_token=
[2025-06-04 06:01:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678365314/log.45006595._054345.job.log.tgz.1
[2025-06-04 06:01:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/11/log.45006595._054345.job.log.tgz.1
[2025-06-04 06:01:22]  workdir=None
[2025-06-04 06:01:22] ]
[2025-06-04 06:01:22] 2025-06-04 10:00:56,372 | INFO     | transferring file log.45006595._054345.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678365314/log.45006595._054345.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 06:01:22] 2025-06-04 10:00:56,372 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678365314/log.45006595._054345.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054345.job
[2025-06-04 06:01:22] 2025-06-04 10:00:56,395 | INFO     | monitor loop #299: job 0:6678365314 is in state 'stageout'
[2025-06-04 06:01:22] 2025-06-04 10:00:56,395 | WARNING  | aborting job monitor tasks since payload process 4939 is not running
[2025-06-04 06:01:22] 2025-06-04 10:00:56,396 | INFO     | adding to output.list: log.45006595._054345.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/11/log.45006595._054345.job.log.tg
[2025-06-04 06:01:22] 2025-06-04 10:00:56,397 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 06:01:22] 2025-06-04 10:00:56,397 | INFO     | summary of transferred files:
[2025-06-04 06:01:22] 2025-06-04 10:00:56,397 | INFO     |  -- lfn=log.45006595._054345.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 06:01:22] 2025-06-04 10:00:56,397 | INFO     | stage-out finished correctly
[2025-06-04 06:01:22] 2025-06-04 10:00:58,326 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 06:01:22] 2025-06-04 10:00:58,411 | INFO     | job 6678365314 has state=finished
[2025-06-04 06:01:22] 2025-06-04 10:00:58,412 | INFO     | preparing for final server update for job 6678365314 in state='finished'
[2025-06-04 06:01:22] 2025-06-04 10:00:58,412 | INFO     | this job has now completed (state=finished)
[2025-06-04 06:01:22] 2025-06-04 10:00:58,412 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:01:22] 2025-06-04 10:00:58,413 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:01:22] 2025-06-04 10:00:58,413 | INFO     | job 6678365314 has finished - writing final server update
[2025-06-04 06:01:22] 2025-06-04 10:00:58,413 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:01:22] 2025-06-04 10:00:58,415 | INFO     | executing command: lscpu
[2025-06-04 06:01:22] 2025-06-04 10:00:58,442 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:01:22] 2025-06-04 10:00:58,904 | INFO     | monitor loop #300: job 0:6678365314 is in state 'finished'
[2025-06-04 06:01:22] 2025-06-04 10:00:58,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:01:22] 2025-06-04 10:01:01,407 | INFO     | monitor loop #301: job 0:6678365314 is in state 'finished'
[2025-06-04 06:01:22] 2025-06-04 10:01:01,407 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:01:22] 2025-06-04 10:01:03,062 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 06:01:22] 2025-06-04 10:01:03,062 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678365314/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:01:22] 2025-06-04 10:01:03,063 | INFO     | extracted standard info from prmon json
[2025-06-04 06:01:22] 2025-06-04 10:01:03,063 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:01:22] 2025-06-04 10:01:03,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:01:22] 2025-06-04 10:01:03,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:01:22] 2025-06-04 10:01:03,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:01:22] 2025-06-04 10:01:03,065 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:01:22] 2025-06-04 10:01:03,065 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 06:01:22] 2025-06-04 10:01:03,065 | INFO     | sum of deviations: -5302133054.0
[2025-06-04 06:01:22] 2025-06-04 10:01:03,065 | INFO     | mean x: 1749029370.5
[2025-06-04 06:01:22] 2025-06-04 10:01:03,066 | INFO     | mean y: 2740696.379310345
[2025-06-04 06:01:22] 2025-06-04 10:01:03,066 | INFO     | -- intersect: 153328258296.9482
[2025-06-04 06:01:22] 2025-06-04 10:01:03,066 | INFO     | intersect: 153328258296.9482
[2025-06-04 06:01:22] 2025-06-04 10:01:03,066 | INFO     | chi2: 0.046679975679796315
[2025-06-04 06:01:22] 2025-06-04 10:01:03,066 | INFO     | -- intersect: 153328258296.9482
[2025-06-04 06:01:22] 2025-06-04 10:01:03,066 | INFO     | current memory leak: -87.66 B/s (using 58 data points, chi2=0.05)
[2025-06-04 06:01:22] 2025-06-04 10:01:03,067 | INFO     | ..............................
[2025-06-04 06:01:22] 2025-06-04 10:01:03,067 | INFO     | . Timing measurements:
[2025-06-04 06:01:22] 2025-06-04 10:01:03,067 | INFO     | . get job = 0 s
[2025-06-04 06:01:22] 2025-06-04 10:01:03,067 | INFO     | . initial setup = 2 s
[2025-06-04 06:01:22] 2025-06-04 10:01:03,067 | INFO     | . payload setup = 9 s
[2025-06-04 06:01:22] 2025-06-04 10:01:03,067 | INFO     | . stage-in = 0 s
[2025-06-04 06:01:22] 2025-06-04 10:01:03,067 | INFO     | . payload execution = 3928 s
[2025-06-04 06:01:22] 2025-06-04 10:01:03,067 | INFO     | . stage-out = 0 s
[2025-06-04 06:01:22] 2025-06-04 10:01:03,067 | INFO     | . log creation = 0 s
[2025-06-04 06:01:22] 2025-06-04 10:01:03,068 | INFO     | ..............................
[2025-06-04 06:01:22] 2025-06-04 10:01:03,151 | INFO     | 
[2025-06-04 06:01:22] 2025-06-04 10:01:03,151 | INFO     | job summary report
[2025-06-04 06:01:22] 2025-06-04 10:01:03,151 | INFO     | --------------------------------------------------
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | PanDA job id: 6678365314
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | task id: 45006595
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | errors: (none)
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | pilot state: finished 
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | transexitcode: 0
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | exeerrorcode: 0
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | exeerrordiag: 
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | exitcode: 0
[2025-06-04 06:01:22] 2025-06-04 10:01:03,152 | INFO     | exitmsg: OK
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | cpuconsumptiontime: 40992 s
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | nevents: 400
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | neventsw: 0
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | pid: 4939
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | pgrp: 4939
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | corecount: 12
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | event service: False
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 3941: 2431125, 3944: 2440066, 3946: 2440122, 3950: 2440420}
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | --------------------------------------------------
[2025-06-04 06:01:22] 2025-06-04 10:01:03,153 | INFO     | 
[2025-06-04 06:01:22] 2025-06-04 10:01:03,154 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 06:01:22] 2025-06-04 10:01:03,179 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,180 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,180 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,182 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:01:22] 2025-06-04 10:01:03,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:01:22] 2025-06-04 10:01:03,183 | INFO     | job 6678365314 has completed (purged errors)
[2025-06-04 06:01:22] 2025-06-04 10:01:03,183 | INFO     | overall cleanup function is called
[2025-06-04 06:01:22] 2025-06-04 10:01:03,442 | INFO     | PID=30678 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 06:01:22] 2025-06-04 10:01:04,191 | INFO     | --- collectZombieJob: --- 10, [4939]
[2025-06-04 06:01:22] 2025-06-04 10:01:04,191 | INFO     | zombie collector waiting for pid 4939
[2025-06-04 06:01:22] 2025-06-04 10:01:04,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:01:22] 2025-06-04 10:01:04,192 | INFO     | collected zombie processes
[2025-06-04 06:01:22] 2025-06-04 10:01:04,192 | INFO     | will attempt to kill all subprocesses of pid=4939
[2025-06-04 06:01:22] 2025-06-04 10:01:04,283 | INFO     | process IDs to be killed: [4939] (in reverse order)
[2025-06-04 06:01:22] 2025-06-04 10:01:04,341 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:01:22] 2025-06-04 10:01:04,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:01:22] 2025-06-04 10:01:04,345 | INFO     | did not find any defunct processes belonging to 4939
[2025-06-04 06:01:22] 2025-06-04 10:01:04,348 | INFO     | did not find any defunct processes belonging to 4939
[2025-06-04 06:01:22] 2025-06-04 10:01:04,349 | INFO     | ready for new job
[2025-06-04 06:01:22] 2025-06-04 10:01:04,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:01:22] 2025-06-04 10:01:04,350 | INFO     | **************************************
[2025-06-04 06:01:22] 2025-06-04 10:01:04,350 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:01:22] 2025-06-04 10:01:04,350 | INFO     | **************************************
[2025-06-04 06:01:22] 2025-06-04 10:01:04,350 | INFO     | 
[2025-06-04 06:01:22] 2025-06-04 10:01:04,351 | INFO     | architecture information:
[2025-06-04 06:01:22] 2025-06-04 10:01:04,351 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:01:22] 2025-06-04 10:01:04,367 | INFO     | cat /etc/os-release:
[2025-06-04 06:01:22] NAME="CentOS Linux"
[2025-06-04 06:01:22] VERSION="7 (Core)"
[2025-06-04 06:01:22] ID="centos"
[2025-06-04 06:01:22] ID_LIKE="rhel fedora"
[2025-06-04 06:01:22] VERSION_ID="7"
[2025-06-04 06:01:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:01:22] ANSI_COLOR="0;31"
[2025-06-04 06:01:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:01:22] HOME_URL="https://www.centos.org/"
[2025-06-04 06:01:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:01:22] 
[2025-06-04 06:01:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:01:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:01:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:01:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:01:22] 
[2025-06-04 06:01:22] 2025-06-04 10:01:04,367 | INFO     | **************************************
[2025-06-04 06:01:22] 2025-06-04 10:01:04,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 06:01:22] 2025-06-04 10:01:04,887 | INFO     | sufficient remaining disk space (29423042560 B)
[2025-06-04 06:01:22] 2025-06-04 10:01:04,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:01:22] 2025-06-04 10:01:04,888 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:01:22] 2025-06-04 10:01:04,888 | INFO     | update_server=False
[2025-06-04 06:01:22] 2025-06-04 10:01:04,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:01:22] 2025-06-04 10:01:04,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:01:22] 2025-06-04 10:01:04,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:01:22] 2025-06-04 10:01:04,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:01:22] 2025-06-04 10:01:04,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:01:22] 2025-06-04 10:01:04,915 | INFO     | aborting loop
[2025-06-04 06:01:22] 2025-06-04 10:01:05,382 | INFO     | all data control threads have been joined
[2025-06-04 06:01:22] 2025-06-04 10:01:05,447 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:01:22] 2025-06-04 10:01:05,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:01:22] 2025-06-04 10:01:05,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:01:22] 2025-06-04 10:01:05,616 | INFO     | all job control threads have been joined
[2025-06-04 06:01:22] 2025-06-04 10:01:05,801 | INFO     | all payload control threads have been joined
[2025-06-04 06:01:22] 2025-06-04 10:01:05,894 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:05,894 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:05,895 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:05,919 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:06,044 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:06,388 | INFO     | [data] control thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:06,621 | INFO     | [job] control thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:06,636 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:06,806 | INFO     | [payload] control thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:06,857 | INFO     | [job] validate thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:06,895 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:07,038 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:07,096 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:07,344 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:08,895 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:15,086 | INFO     | job.realtimelogging is not enabled
[2025-06-04 06:01:22] 2025-06-04 10:01:16,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:01:22] 2025-06-04 10:01:17,673 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140586701248320)>', '<ExcThread(monitor, started 140586250118912)>']
[2025-06-04 06:01:22] 2025-06-04 10:01:18,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:01:22] 2025-06-04 10:01:18,510 | INFO     | [monitor] control thread has ended
[2025-06-04 06:01:22] 2025-06-04 10:01:22,698 | INFO     | all workflow threads have been joined
[2025-06-04 06:01:22] 2025-06-04 10:01:22,699 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:01:22] 2025-06-04 10:01:22,699 | INFO     | traces error code: 0
[2025-06-04 06:01:22] 2025-06-04 10:01:22,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:01:22] 2025-06-04 10:01:22,777 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:01:22] 2025-06-04 10:01:22,780 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:01:22] 2025-06-04 10:01:22,784 [wrapper] pilotpid: 30678
[2025-06-04 06:01:22] 2025-06-04 10:01:22,787 [wrapper] Pilot exit status: 0
[2025-06-04 06:01:22] 2025-06-04 10:01:22,803 [wrapper] pandaids: 6678365314
[2025-06-04 06:01:22] 2025-06-04 10:01:22,842 [wrapper] cleanup supervisor_pilot 19497 30679
[2025-06-04 06:01:22] 2025-06-04 10:01:22,846 [wrapper] Test setup, not cleaning
[2025-06-04 06:01:22] 2025-06-04 10:01:22,850 [wrapper] apfmon messages muted
[2025-06-04 06:01:22] 2025-06-04 10:01:22,854 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:01:22] 2025-06-04 10:01:22,858 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:01:22]  *** Error codes and diagnostics ***
[2025-06-04 06:01:22]     "exeErrorCode": 0,
[2025-06-04 06:01:22]     "exeErrorDiag": "",
[2025-06-04 06:01:22]     "pilotErrorCode": 0,
[2025-06-04 06:01:22]     "pilotErrorDiag": "",
[2025-06-04 06:01:22]  *** Listing of results directory ***
[2025-06-04 06:01:22] total 385048
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:31 queuedata.json
[2025-06-04 06:01:22] -rwx------ 1 boincer umatlas     37140 Jun  4 02:32 runpilot2-wrapper.sh
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas       100 Jun  4 04:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:01:22] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 04:54 run_atlas
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas       105 Jun  4 04:54 job.xml
[2025-06-04 06:01:22] -rw-r--r-- 2 boincer umatlas 214243930 Jun  4 04:54 EVNT.45006593._002175.pool.root.1
[2025-06-04 06:01:22] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:54 start_atlas.sh
[2025-06-04 06:01:22] drwxrwx--x 2 boincer umatlas      4096 Jun  4 04:54 shared
[2025-06-04 06:01:22] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 04:54 input.tar.gz
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas         0 Jun  4 04:54 boinc_lockfile
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 04:54 pandaJob.out
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas    986774 Jun  4 04:54 agis_schedconf.cvmfs.json
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas   1603667 Jun  4 04:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:01:22] drwx------ 4 boincer umatlas      4096 Jun  4 04:54 pilot3
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas 174719155 Jun  4 06:00 HITS.45006595._054345.pool.root.1
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas       529 Jun  4 06:00 boinc_task_state.xml
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas        95 Jun  4 06:00 pilot_heartbeat.json
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas      1049 Jun  4 06:00 memory_monitor_summary.json
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas    356197 Jun  4 06:00 log.45006595._054345.job.log.tgz.1
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas      7749 Jun  4 06:01 heartbeat.json
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 06:01 init_data.xml
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 06:01 boinc_mmap_file
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas        27 Jun  4 06:01 wrapper_checkpoint.txt
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas      4425 Jun  4 06:01 pilotlog.txt
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas    387853 Jun  4 06:01 log.45006595._054345.job.log.1
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas       357 Jun  4 06:01 output.list
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas       620 Jun  4 06:01 runtime_log
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas    768000 Jun  4 06:01 result.tar.gz
[2025-06-04 06:01:22] -rw------- 1 boincer umatlas       659 Jun  4 06:01 sOOLDmuqwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAXnKDmvST1om.diag
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 06:01 runtime_log.err
[2025-06-04 06:01:22] -rw-r--r-- 1 boincer umatlas     21386 Jun  4 06:01 stderr.txt
[2025-06-04 06:01:23] HITS file was successfully produced:
[2025-06-04 06:01:23] -rw------- 1 boincer umatlas 174719155 Jun  4 06:00 shared/HITS.pool.root.1
[2025-06-04 06:01:23]  *** Contents of shared directory: ***
[2025-06-04 06:01:23] total 381124
[2025-06-04 06:01:23] -rw-r--r-- 2 boincer umatlas 214243930 Jun  4 04:54 ATLAS.root_0
[2025-06-04 06:01:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:54 start_atlas.sh
[2025-06-04 06:01:23] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 04:54 input.tar.gz
[2025-06-04 06:01:23] -rw------- 1 boincer umatlas 174719155 Jun  4 06:00 HITS.pool.root.1
[2025-06-04 06:01:23] -rw------- 1 boincer umatlas    768000 Jun  4 06:01 result.tar.gz
06:01:24 (27093): run_atlas exited; CPU time 40965.964898
06:01:24 (27093): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN