Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:48:38 (2382909): wrapper (7.7.26015): starting
12:48:38 (2382909): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 12:48:38] Arguments: --nthreads 12
[2025-06-06 12:48:38] Threads: 12
[2025-06-06 12:48:38] Checking for CVMFS
[2025-06-06 12:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 12:48:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 12:48:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 12:48:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 12:48:55] 2.13.0.0 2383116 0 25316 146852 3 1 2327357 4096000 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-06-06 12:48:55] CVMFS is ok
[2025-06-06 12:48:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 12:48:55] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 12:48:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 12:48:55] Further information can be found at the LHC@home message board.
[2025-06-06 12:48:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 12:48:55] Checking for apptainer binary...
[2025-06-06 12:48:55] apptainer is not installed, using version from CVMFS
[2025-06-06 12:48:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 12:48:56] ws24
[2025-06-06 12:48:56] apptainer works
[2025-06-06 12:48:56] Set ATHENA_PROC_NUMBER=12
[2025-06-06 12:48:56] Set ATHENA_CORE_NUMBER=12
[2025-06-06 12:48:56] Starting ATLAS job with PandaID=6678365285
[2025-06-06 12:48:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 14:18:51]  *** The last 200 lines of the pilot log: ***
[2025-06-06 14:18:51] 2025-06-06 12:06:39,932 | INFO     | log transfer has been attempted: DONE
[2025-06-06 14:18:51] 2025-06-06 12:06:39,932 | INFO     | job 6678365285 has finished - writing final server update
[2025-06-06 14:18:51] 2025-06-06 12:06:39,932 | INFO     | total number of processed events: 400 (read)
[2025-06-06 14:18:51] 2025-06-06 12:06:39,942 | INFO     | executing command: lscpu
[2025-06-06 14:18:51] 2025-06-06 12:06:40,001 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 14:18:51] 2025-06-06 12:06:40,181 | INFO     | monitor loop #333: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:06:40,182 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:06:42,684 | INFO     | monitor loop #334: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:06:42,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:06:45,187 | INFO     | monitor loop #335: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:06:45,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:06:47,690 | INFO     | monitor loop #336: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:06:47,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:06:49,376 | INFO     | PID=2387170 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 14:18:51] 2025-06-06 12:06:50,193 | INFO     | monitor loop #337: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:06:50,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:06:52,696 | INFO     | monitor loop #338: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:06:52,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:06:55,200 | INFO     | monitor loop #339: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:06:55,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:06:57,703 | INFO     | monitor loop #340: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:06:57,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:07:00,208 | INFO     | monitor loop #341: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:07:00,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:07:02,711 | INFO     | monitor loop #342: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:07:02,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:07:05,215 | INFO     | monitor loop #343: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:07:05,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:07:07,721 | INFO     | monitor loop #344: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:07:07,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:07:10,224 | INFO     | monitor loop #345: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:07:10,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:07:10,437 | INFO     | 4571s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 14:18:51] 2025-06-06 12:07:11,720 | INFO     | PID=2387170 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 14:18:51] 2025-06-06 12:07:12,731 | INFO     | monitor loop #346: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:07:12,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:07:15,234 | INFO     | monitor loop #347: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:07:15,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:07:17,737 | INFO     | monitor loop #348: job 0:6678365285 is in state 'finished'
[2025-06-06 14:18:51] 2025-06-06 12:07:17,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 14:18:51] 2025-06-06 12:07:19,557 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 14:18:51] 2025-06-06 12:07:19,558 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678365285/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 14:18:51] 2025-06-06 12:07:19,558 | INFO     | extracted standard info from prmon json
[2025-06-06 14:18:51] 2025-06-06 12:07:19,558 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 14:18:51] 2025-06-06 12:07:19,558 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 14:18:51] 2025-06-06 12:07:19,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 14:18:51] 2025-06-06 12:07:19,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 14:18:51] 2025-06-06 12:07:19,564 | INFO     | fitting pss+swap vs Time
[2025-06-06 14:18:51] 2025-06-06 12:07:19,564 | INFO     | sum of square deviations: 93240818.0
[2025-06-06 14:18:51] 2025-06-06 12:07:19,564 | INFO     | sum of deviations: -4431169503.0
[2025-06-06 14:18:51] 2025-06-06 12:07:19,565 | INFO     | mean x: 1749209436.0
[2025-06-06 14:18:51] 2025-06-06 12:07:19,565 | INFO     | mean y: 2748244.2537313434
[2025-06-06 14:18:51] 2025-06-06 12:07:19,565 | INFO     | -- intersect: 83132043690.40727
[2025-06-06 14:18:51] 2025-06-06 12:07:19,565 | INFO     | intersect: 83132043690.40727
[2025-06-06 14:18:51] 2025-06-06 12:07:19,565 | INFO     | chi2: 0.09675329856296155
[2025-06-06 14:18:51] 2025-06-06 12:07:19,565 | INFO     | -- intersect: 83132043690.40727
[2025-06-06 14:18:51] 2025-06-06 12:07:19,565 | INFO     | current memory leak: -47.52 B/s (using 67 data points, chi2=0.10)
[2025-06-06 14:18:51] 2025-06-06 12:07:19,566 | INFO     | ..............................
[2025-06-06 14:18:51] 2025-06-06 12:07:19,566 | INFO     | . Timing measurements:
[2025-06-06 14:18:51] 2025-06-06 12:07:19,566 | INFO     | . get job = 0 s
[2025-06-06 14:18:51] 2025-06-06 12:07:19,566 | INFO     | . initial setup = 19 s
[2025-06-06 14:18:51] 2025-06-06 12:07:19,566 | INFO     | . payload setup = 16 s
[2025-06-06 14:18:51] 2025-06-06 12:07:19,566 | INFO     | . stage-in = 0 s
[2025-06-06 14:18:51] 2025-06-06 12:07:19,566 | INFO     | . payload execution = 4483 s
[2025-06-06 14:18:51] 2025-06-06 12:07:19,566 | INFO     | . stage-out = 0 s
[2025-06-06 14:18:51] 2025-06-06 12:07:19,566 | INFO     | . log creation = 0 s
[2025-06-06 14:18:51] 2025-06-06 12:07:19,567 | INFO     | ..............................
[2025-06-06 14:18:51] 2025-06-06 12:07:19,908 | INFO     | 
[2025-06-06 14:18:51] 2025-06-06 12:07:19,908 | INFO     | job summary report
[2025-06-06 14:18:51] 2025-06-06 12:07:19,908 | INFO     | --------------------------------------------------
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | PanDA job id: 6678365285
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | task id: 45006595
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | errors: (none)
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | pilot state: finished 
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | transexitcode: 0
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | exeerrorcode: 0
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | exeerrordiag: 
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | exitcode: 0
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | exitmsg: OK
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | cpuconsumptiontime: 37285 s
[2025-06-06 14:18:51] 2025-06-06 12:07:19,909 | INFO     | nevents: 400
[2025-06-06 14:18:51] 2025-06-06 12:07:19,910 | INFO     | neventsw: 0
[2025-06-06 14:18:51] 2025-06-06 12:07:19,910 | INFO     | pid: 2393791
[2025-06-06 14:18:51] 2025-06-06 12:07:19,910 | INFO     | pgrp: 2393791
[2025-06-06 14:18:51] 2025-06-06 12:07:19,910 | INFO     | corecount: 12
[2025-06-06 14:18:51] 2025-06-06 12:07:19,910 | INFO     | event service: False
[2025-06-06 14:18:51] 2025-06-06 12:07:19,910 | INFO     | sizes: {0: 2397349, 5: 2397555, 11: 2397611, 4503: 2423521, 4504: 2432532, 4545: 2432646}
[2025-06-06 14:18:51] 2025-06-06 12:07:19,910 | INFO     | --------------------------------------------------
[2025-06-06 14:18:51] 2025-06-06 12:07:19,910 | INFO     | 
[2025-06-06 14:18:51] 2025-06-06 12:07:19,910 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 14:18:51] 2025-06-06 12:07:19,944 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,944 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | job 6678365285 has completed (purged errors)
[2025-06-06 14:18:51] 2025-06-06 12:07:19,946 | INFO     | overall cleanup function is called
[2025-06-06 14:18:51] 2025-06-06 12:07:20,955 | INFO     | --- collectZombieJob: --- 10, [2393791]
[2025-06-06 14:18:51] 2025-06-06 12:07:20,955 | INFO     | zombie collector waiting for pid 2393791
[2025-06-06 14:18:51] 2025-06-06 12:07:20,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 14:18:51] 2025-06-06 12:07:20,955 | INFO     | collected zombie processes
[2025-06-06 14:18:51] 2025-06-06 12:07:20,956 | INFO     | will attempt to kill all subprocesses of pid=2393791
[2025-06-06 14:18:51] 2025-06-06 12:07:21,207 | INFO     | process IDs to be killed: [2393791] (in reverse order)
[2025-06-06 14:18:51] 2025-06-06 12:07:21,345 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 14:18:51] 2025-06-06 12:07:21,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 14:18:51] 2025-06-06 12:07:21,354 | INFO     | did not find any defunct processes belonging to 2393791
[2025-06-06 14:18:51] 2025-06-06 12:07:21,363 | INFO     | did not find any defunct processes belonging to 2393791
[2025-06-06 14:18:51] 2025-06-06 12:07:21,363 | INFO     | ready for new job
[2025-06-06 14:18:51] 2025-06-06 12:07:21,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 14:18:51] 2025-06-06 12:07:21,365 | INFO     | **************************************
[2025-06-06 14:18:51] 2025-06-06 12:07:21,365 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 14:18:51] 2025-06-06 12:07:21,365 | INFO     | **************************************
[2025-06-06 14:18:51] 2025-06-06 12:07:21,365 | INFO     | 
[2025-06-06 14:18:51] 2025-06-06 12:07:21,366 | INFO     | architecture information:
[2025-06-06 14:18:51] 2025-06-06 12:07:21,369 | INFO     | executing command: cat /etc/os-release
[2025-06-06 14:18:51] 2025-06-06 12:07:21,403 | INFO     | cat /etc/os-release:
[2025-06-06 14:18:51] NAME="CentOS Linux"
[2025-06-06 14:18:51] VERSION="7 (Core)"
[2025-06-06 14:18:51] ID="centos"
[2025-06-06 14:18:51] ID_LIKE="rhel fedora"
[2025-06-06 14:18:51] VERSION_ID="7"
[2025-06-06 14:18:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 14:18:51] ANSI_COLOR="0;31"
[2025-06-06 14:18:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 14:18:51] HOME_URL="https://www.centos.org/"
[2025-06-06 14:18:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 14:18:51] 
[2025-06-06 14:18:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 14:18:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 14:18:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 14:18:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 14:18:51] 
[2025-06-06 14:18:51] 2025-06-06 12:07:21,404 | INFO     | **************************************
[2025-06-06 14:18:51] 2025-06-06 12:07:21,906 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 14:18:51] 2025-06-06 12:07:21,938 | INFO     | sufficient remaining disk space (22456303616 B)
[2025-06-06 14:18:51] 2025-06-06 12:07:21,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 14:18:51] 2025-06-06 12:07:21,938 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 14:18:51] 2025-06-06 12:07:21,938 | INFO     | update_server=False
[2025-06-06 14:18:51] 2025-06-06 12:07:21,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 14:18:51] 2025-06-06 12:07:21,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 14:18:51] 2025-06-06 12:07:21,939 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 14:18:51] 2025-06-06 12:07:21,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:18:51] 2025-06-06 12:07:21,941 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 14:18:51] 2025-06-06 12:07:21,942 | INFO     | aborting loop
[2025-06-06 14:18:51] 2025-06-06 12:07:21,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 14:18:51] 2025-06-06 12:07:21,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 14:18:51] 2025-06-06 12:07:22,083 | INFO     | all job control threads have been joined
[2025-06-06 14:18:51] 2025-06-06 12:07:22,943 | INFO     | [job] retrieve thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:22,946 | INFO     | [job] job monitor thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:22,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:23,035 | INFO     | all data control threads have been joined
[2025-06-06 14:18:51] 2025-06-06 12:07:23,060 | INFO     | all payload control threads have been joined
[2025-06-06 14:18:51] 2025-06-06 12:07:23,088 | INFO     | [job] control thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:23,407 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:23,490 | INFO     | [payload] validate_post thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:23,548 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:23,550 | INFO     | [job] validate thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:23,725 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:23,946 | INFO     | [data] copytool_out thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:24,019 | INFO     | [payload] failed_post thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:24,040 | INFO     | [data] control thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:24,068 | INFO     | [payload] control thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:24,101 | INFO     | [data] copytool_in thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:24,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 14:18:51] 2025-06-06 12:07:25,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 14:18:51] 2025-06-06 12:07:25,689 | INFO     | [job] queue monitor thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:29,259 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 14:18:51] 2025-06-06 12:07:29,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131473164543808)>', '<ExcThread(monitor, started 131472488912640)>']
[2025-06-06 14:18:51] 2025-06-06 12:07:29,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 14:18:51] 2025-06-06 12:07:29,982 | INFO     | [monitor] control thread has ended
[2025-06-06 14:18:51] 2025-06-06 12:07:34,403 | INFO     | all workflow threads have been joined
[2025-06-06 14:18:51] 2025-06-06 12:07:34,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 14:18:51] 2025-06-06 12:07:34,404 | INFO     | traces error code: 0
[2025-06-06 14:18:51] 2025-06-06 12:07:34,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 14:18:51] 2025-06-06 12:07:34,556 [wrapper] ==== pilot stdout END ====
[2025-06-06 14:18:51] 2025-06-06 12:07:34,563 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 14:18:51] 2025-06-06 12:07:34,567 [wrapper] pilotpid: 2387170
[2025-06-06 14:18:51] 2025-06-06 12:07:34,572 [wrapper] Pilot exit status: 0
[2025-06-06 14:18:51] 2025-06-06 12:07:34,596 [wrapper] pandaids: 6678365285
[2025-06-06 14:18:51] 2025-06-06 12:07:34,674 [wrapper] cleanup supervisor_pilot 2406000 2387171
[2025-06-06 14:18:51] 2025-06-06 12:07:34,680 [wrapper] Test setup, not cleaning
[2025-06-06 14:18:51] 2025-06-06 12:07:34,688 [wrapper] apfmon messages muted
[2025-06-06 14:18:51] 2025-06-06 12:07:34,695 [wrapper] ==== wrapper stdout END ====
[2025-06-06 14:18:51] 2025-06-06 12:07:34,701 [wrapper] ==== wrapper stderr END ====
[2025-06-06 14:18:51]  *** Error codes and diagnostics ***
[2025-06-06 14:18:51]     "exeErrorCode": 0,
[2025-06-06 14:18:51]     "exeErrorDiag": "",
[2025-06-06 14:18:51]     "pilotErrorCode": 0,
[2025-06-06 14:18:51]     "pilotErrorDiag": "",
[2025-06-06 14:18:51]  *** Listing of results directory ***
[2025-06-06 14:18:51] total 392112
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:31 queuedata.json
[2025-06-06 14:18:51] -rwx------ 1 boinc boinc     37140 Jun  4 08:32 runpilot2-wrapper.sh
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc       100 Jun  6 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 14:18:51] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 12:48 run_atlas
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc       105 Jun  6 12:48 job.xml
[2025-06-06 14:18:51] -rw-r--r-- 2 boinc boinc 217288783 Jun  6 12:48 EVNT.45006593._002174.pool.root.1
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc      9498 Jun  6 12:48 init_data.xml
[2025-06-06 14:18:51] drwxrwx--x 2 boinc boinc      4096 Jun  6 12:48 shared
[2025-06-06 14:18:51] -rw-r--r-- 2 boinc boinc    508881 Jun  6 12:48 input.tar.gz
[2025-06-06 14:18:51] -rw-r--r-- 2 boinc boinc     15093 Jun  6 12:48 start_atlas.sh
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc         0 Jun  6 12:48 boinc_lockfile
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc      2525 Jun  6 12:48 pandaJob.out
[2025-06-06 14:18:51] -rw------- 1 boinc boinc    985732 Jun  6 12:51 agis_schedconf.cvmfs.json
[2025-06-06 14:18:51] -rw------- 1 boinc boinc   1598969 Jun  6 12:51 agis_ddmendpoints.agis.ALL.json
[2025-06-06 14:18:51] drwx------ 4 boinc boinc      4096 Jun  6 12:51 pilot3
[2025-06-06 14:18:51] -rw------- 1 boinc boinc 178812870 Jun  6 14:06 HITS.45006595._054316.pool.root.1
[2025-06-06 14:18:51] -rw------- 1 boinc boinc      1025 Jun  6 14:06 memory_monitor_summary.json
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc       529 Jun  6 14:06 boinc_task_state.xml
[2025-06-06 14:18:51] -rw------- 1 boinc boinc    358880 Jun  6 14:06 log.45006595._054316.job.log.tgz.1
[2025-06-06 14:18:51] -rw------- 1 boinc boinc        95 Jun  6 14:06 pilot_heartbeat.json
[2025-06-06 14:18:51] -rw------- 1 boinc boinc      7661 Jun  6 14:07 heartbeat.json
[2025-06-06 14:18:51] -rw------- 1 boinc boinc      4483 Jun  6 14:07 pilotlog.txt
[2025-06-06 14:18:51] -rw------- 1 boinc boinc    433347 Jun  6 14:07 log.45006595._054316.job.log.1
[2025-06-06 14:18:51] -rw------- 1 boinc boinc       357 Jun  6 14:07 output.list
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc       620 Jun  6 14:07 runtime_log
[2025-06-06 14:18:51] -rw------- 1 boinc boinc    808960 Jun  6 14:07 result.tar.gz
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc      8686 Jun  6 14:07 runtime_log.err
[2025-06-06 14:18:51] -rw------- 1 boinc boinc       638 Jun  6 14:07 JSoKDmuqwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiWnKDmWevEwn.diag
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc      8192 Jun  6 14:18 boinc_mmap_file
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc     22557 Jun  6 14:18 stderr.txt
[2025-06-06 14:18:51] -rw-r--r-- 1 boinc boinc        27 Jun  6 14:18 wrapper_checkpoint.txt
[2025-06-06 14:18:51] HITS file was successfully produced:
[2025-06-06 14:18:51] -rw------- 1 boinc boinc 178812870 Jun  6 14:06 shared/HITS.pool.root.1
[2025-06-06 14:18:51]  *** Contents of shared directory: ***
[2025-06-06 14:18:51] total 388140
[2025-06-06 14:18:51] -rw-r--r-- 2 boinc boinc 217288783 Jun  6 12:48 ATLAS.root_0
[2025-06-06 14:18:51] -rw-r--r-- 2 boinc boinc    508881 Jun  6 12:48 input.tar.gz
[2025-06-06 14:18:51] -rw-r--r-- 2 boinc boinc     15093 Jun  6 12:48 start_atlas.sh
[2025-06-06 14:18:51] -rw------- 1 boinc boinc 178812870 Jun  6 14:06 HITS.pool.root.1
[2025-06-06 14:18:51] -rw------- 1 boinc boinc    808960 Jun  6 14:07 result.tar.gz
14:18:53 (2382909): run_atlas exited; CPU time 37129.490308
14:18:53 (2382909): called boinc_finish(0)

</stderr_txt>
]]>

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