Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:43:24 (31805): wrapper (7.7.26015): starting
18:43:24 (31805): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:43:25] Arguments: --nthreads 8
[2025-06-04 18:43:25] Threads: 8
[2025-06-04 18:43:25] Checking for CVMFS
[2025-06-04 18:43:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:43:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:43:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:43:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:43:25] 2.11.2.0 6428 33451 95836 146788 3 260 18280549 25165825 3438 130560 0 18271660 99.852 19207885 2121 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:43:25] CVMFS is ok
[2025-06-04 18:43:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:43:25] Checking for apptainer binary...
[2025-06-04 18:43:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:43:25] Running /usr/bin/apptainer --version
[2025-06-04 18:43:25] apptainer version 1.3.2-1.el7
[2025-06-04 18:43:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:43:28] cg-vwn335.simple-grid.lan
[2025-06-04 18:43:28] apptainer works
[2025-06-04 18:43:28] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:43:28] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:43:28] Starting ATLAS job with PandaID=6678364794
[2025-06-04 18:43:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:03:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:03:01] 2025-06-04 20:45:39,745 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6678364794/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:03:01] 2025-06-04 20:45:39,746 | INFO     | extracted standard info from prmon json
[2025-06-04 23:03:01] 2025-06-04 20:45:39,746 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:03:01] 2025-06-04 20:45:39,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:03:01] 2025-06-04 20:45:39,747 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:03:01] 2025-06-04 20:45:39,747 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:03:01] 2025-06-04 20:45:39,752 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:03:01] 2025-06-04 20:45:39,752 | INFO     | sum of square deviations: 3922276332.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,754 | INFO     | sum of deviations: 78343477849.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,754 | INFO     | mean x: 1749062763.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,754 | INFO     | mean y: 2435943.746781116
[2025-06-04 23:03:01] 2025-06-04 20:45:39,755 | INFO     | -- intersect: -34933312644.81065
[2025-06-04 23:03:01] 2025-06-04 20:45:39,755 | INFO     | intersect: -34933312644.81065
[2025-06-04 23:03:01] 2025-06-04 20:45:39,755 | INFO     | chi2: 6.434358833652302
[2025-06-04 23:03:01] 2025-06-04 20:45:39,756 | INFO     | sum of square deviations: 3675146117.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,757 | INFO     | sum of deviations: 91537077264.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,757 | INFO     | mean x: 1749062610.5
[2025-06-04 23:03:01] 2025-06-04 20:45:39,758 | INFO     | mean y: 2443920.754385965
[2025-06-04 23:03:01] 2025-06-04 20:45:39,758 | INFO     | -- intersect: -43561559854.85714
[2025-06-04 23:03:01] 2025-06-04 20:45:39,758 | INFO     | intersect: -43561559854.85714
[2025-06-04 23:03:01] 2025-06-04 20:45:39,758 | INFO     | chi2: 5.723931955522551
[2025-06-04 23:03:01] 2025-06-04 20:45:39,758 | INFO     | current chi2=5.723931955522551 (change=11.041144836594311 %)
[2025-06-04 23:03:01] 2025-06-04 20:45:39,758 | INFO     | right removable region: 227
[2025-06-04 23:03:01] 2025-06-04 20:45:39,759 | INFO     | sum of square deviations: 3675146117.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,760 | INFO     | sum of deviations: -2868828383.4999943
[2025-06-04 23:03:01] 2025-06-04 20:45:39,761 | INFO     | mean x: 1749062915.5
[2025-06-04 23:03:01] 2025-06-04 20:45:39,761 | INFO     | mean y: 2486025.697368421
[2025-06-04 23:03:01] 2025-06-04 20:45:39,761 | INFO     | -- intersect: 1367808975.253894
[2025-06-04 23:03:01] 2025-06-04 20:45:39,761 | INFO     | intersect: 1367808975.253894
[2025-06-04 23:03:01] 2025-06-04 20:45:39,761 | INFO     | chi2: 1.6064785631940832
[2025-06-04 23:03:01] 2025-06-04 20:45:39,761 | INFO     | current chi2=1.6064785631940832 (change=75.0328104986615 %)
[2025-06-04 23:03:01] 2025-06-04 20:45:39,762 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,764 | INFO     | sum of deviations: -28076414063.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,764 | INFO     | mean x: 1749063068.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,764 | INFO     | mean y: 2502129.192825112
[2025-06-04 23:03:01] 2025-06-04 20:45:39,764 | INFO     | -- intersect: 14283640545.20071
[2025-06-04 23:03:01] 2025-06-04 20:45:39,764 | INFO     | intersect: 14283640545.20071
[2025-06-04 23:03:01] 2025-06-04 20:45:39,764 | INFO     | chi2: 0.9103910015888113
[2025-06-04 23:03:01] 2025-06-04 20:45:39,765 | INFO     | current chi2=0.9103910015888113 (change=43.33002490996674 %)
[2025-06-04 23:03:01] 2025-06-04 20:45:39,765 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 23:03:01] 2025-06-04 20:45:39,767 | INFO     | sum of deviations: -24977185690.500004
[2025-06-04 23:03:01] 2025-06-04 20:45:39,767 | INFO     | mean x: 1749063220.5
[2025-06-04 23:03:01] 2025-06-04 20:45:39,767 | INFO     | mean y: 2500002.0963302753
[2025-06-04 23:03:01] 2025-06-04 20:45:39,767 | INFO     | -- intersect: 13601602396.068903
[2025-06-04 23:03:01] 2025-06-04 20:45:39,767 | INFO     | intersect: 13601602396.068903
[2025-06-04 23:03:01] 2025-06-04 20:45:39,767 | INFO     | chi2: 0.8925960435557777
[2025-06-04 23:03:01] 2025-06-04 20:45:39,768 | INFO     | current chi2=0.8925960435557777 (change=1.9546500352022205 %)
[2025-06-04 23:03:01] 2025-06-04 20:45:39,768 | INFO     | left removable region: 30
[2025-06-04 23:03:01] 2025-06-04 20:45:39,768 | INFO     | sum of square deviations: 2370641658.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,777 | INFO     | sum of deviations: 6964885999.000002
[2025-06-04 23:03:01] 2025-06-04 20:45:39,777 | INFO     | mean x: 1749063495.0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,777 | INFO     | mean y: 2496566.2994923857
[2025-06-04 23:03:01] 2025-06-04 20:45:39,777 | INFO     | -- intersect: -5136208309.900532
[2025-06-04 23:03:01] 2025-06-04 20:45:39,777 | INFO     | intersect: -5136208309.900532
[2025-06-04 23:03:01] 2025-06-04 20:45:39,778 | INFO     | chi2: 0.0005218219976187168
[2025-06-04 23:03:01] 2025-06-04 20:45:39,778 | INFO     | -- intersect: -5136208309.900532
[2025-06-04 23:03:01] 2025-06-04 20:45:39,778 | INFO     | current memory leak: 2.94 B/s (using 197 data points, chi2=0.00)
[2025-06-04 23:03:01] 2025-06-04 20:45:39,779 | INFO     | ..............................
[2025-06-04 23:03:01] 2025-06-04 20:45:39,779 | INFO     | . Timing measurements:
[2025-06-04 23:03:01] 2025-06-04 20:45:39,779 | INFO     | . get job = 0 s
[2025-06-04 23:03:01] 2025-06-04 20:45:39,779 | INFO     | . initial setup = 3 s
[2025-06-04 23:03:01] 2025-06-04 20:45:39,779 | INFO     | . payload setup = 35 s
[2025-06-04 23:03:01] 2025-06-04 20:45:39,786 | INFO     | . stage-in = 0 s
[2025-06-04 23:03:01] 2025-06-04 20:45:39,787 | INFO     | . payload execution = 14302 s
[2025-06-04 23:03:01] 2025-06-04 20:45:39,787 | INFO     | . stage-out = 3 s
[2025-06-04 23:03:01] 2025-06-04 20:45:39,787 | INFO     | . log creation = 0 s
[2025-06-04 23:03:01] 2025-06-04 20:45:39,787 | INFO     | ..............................
[2025-06-04 23:03:01] 2025-06-04 20:45:39,920 | INFO     | 
[2025-06-04 23:03:01] 2025-06-04 20:45:39,920 | INFO     | job summary report
[2025-06-04 23:03:01] 2025-06-04 20:45:39,920 | INFO     | --------------------------------------------------
[2025-06-04 23:03:01] 2025-06-04 20:45:39,920 | INFO     | PanDA job id: 6678364794
[2025-06-04 23:03:01] 2025-06-04 20:45:39,920 | INFO     | task id: 45006595
[2025-06-04 23:03:01] 2025-06-04 20:45:39,920 | INFO     | errors: (none)
[2025-06-04 23:03:01] 2025-06-04 20:45:39,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | pilot state: finished 
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | transexitcode: 0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | exeerrorcode: 0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | exeerrordiag: 
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | exitcode: 0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | exitmsg: OK
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | cpuconsumptiontime: 52215 s
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | nevents: 400
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | neventsw: 0
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | pid: 26469
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | pgrp: 26469
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | corecount: 8
[2025-06-04 23:03:01] 2025-06-04 20:45:39,921 | INFO     | event service: False
[2025-06-04 23:03:01] 2025-06-04 20:45:39,922 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 23: 2397398, 24: 2397632, 33: 2397660, 14341: 2427604, 14342: 2427603, 14345: 2436600, 14346: 2436656, 14427: 2436826}
[2025-06-04 23:03:01] 2025-06-04 20:45:39,922 | INFO     | --------------------------------------------------
[2025-06-04 23:03:01] 2025-06-04 20:45:39,922 | INFO     | 
[2025-06-04 23:03:01] 2025-06-04 20:45:39,922 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 23:03:01] 2025-06-04 20:45:40,443 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,443 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,443 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,443 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:03:01] 2025-06-04 20:45:40,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:03:01] 2025-06-04 20:45:40,445 | INFO     | job 6678364794 has completed (purged errors)
[2025-06-04 23:03:01] 2025-06-04 20:45:40,445 | INFO     | overall cleanup function is called
[2025-06-04 23:03:01] 2025-06-04 20:45:41,454 | INFO     | --- collectZombieJob: --- 10, [26469]
[2025-06-04 23:03:01] 2025-06-04 20:45:41,455 | INFO     | zombie collector waiting for pid 26469
[2025-06-04 23:03:01] 2025-06-04 20:45:41,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:03:01] 2025-06-04 20:45:41,455 | INFO     | collected zombie processes
[2025-06-04 23:03:01] 2025-06-04 20:45:41,455 | INFO     | will attempt to kill all subprocesses of pid=26469
[2025-06-04 23:03:01] 2025-06-04 20:45:41,594 | INFO     | process IDs to be killed: [26469] (in reverse order)
[2025-06-04 23:03:01] 2025-06-04 20:45:42,409 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:03:01] 2025-06-04 20:45:42,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:03:01] 2025-06-04 20:45:42,412 | INFO     | did not find any defunct processes belonging to 26469
[2025-06-04 23:03:01] 2025-06-04 20:45:42,415 | INFO     | did not find any defunct processes belonging to 26469
[2025-06-04 23:03:01] 2025-06-04 20:45:42,416 | INFO     | ready for new job
[2025-06-04 23:03:01] 2025-06-04 20:45:42,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:03:01] 2025-06-04 20:45:42,418 | INFO     | **************************************
[2025-06-04 23:03:01] 2025-06-04 20:45:42,418 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:03:01] 2025-06-04 20:45:42,418 | INFO     | **************************************
[2025-06-04 23:03:01] 2025-06-04 20:45:42,418 | INFO     | 
[2025-06-04 23:03:01] 2025-06-04 20:45:42,419 | INFO     | pilot is running in a VM
[2025-06-04 23:03:01] 2025-06-04 20:45:42,419 | INFO     | architecture information:
[2025-06-04 23:03:01] 2025-06-04 20:45:42,419 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:03:01] 2025-06-04 20:45:42,685 | INFO     | cat /etc/os-release:
[2025-06-04 23:03:01] NAME="CentOS Linux"
[2025-06-04 23:03:01] VERSION="7 (Core)"
[2025-06-04 23:03:01] ID="centos"
[2025-06-04 23:03:01] ID_LIKE="rhel fedora"
[2025-06-04 23:03:01] VERSION_ID="7"
[2025-06-04 23:03:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:03:01] ANSI_COLOR="0;31"
[2025-06-04 23:03:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:03:01] HOME_URL="https://www.centos.org/"
[2025-06-04 23:03:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:03:01] 
[2025-06-04 23:03:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:03:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:03:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:03:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:03:01] 
[2025-06-04 23:03:01] 2025-06-04 20:45:42,685 | INFO     | **************************************
[2025-06-04 23:03:01] 2025-06-04 20:45:43,189 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 23:03:01] 2025-06-04 20:45:43,458 | INFO     | sufficient remaining disk space (497036558336 B)
[2025-06-04 23:03:01] 2025-06-04 20:45:43,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:03:01] 2025-06-04 20:45:43,458 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:03:01] 2025-06-04 20:45:43,459 | INFO     | update_server=False
[2025-06-04 23:03:01] 2025-06-04 20:45:43,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:03:01] 2025-06-04 20:45:43,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:03:01] 2025-06-04 20:45:43,460 | INFO     | aborting loop
[2025-06-04 23:03:01] 2025-06-04 20:45:43,845 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:03:01] 2025-06-04 20:45:43,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:03:01] 2025-06-04 20:45:43,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:03:01] 2025-06-04 20:45:44,148 | INFO     | all data control threads have been joined
[2025-06-04 23:03:01] 2025-06-04 20:45:44,294 | INFO     | all job control threads have been joined
[2025-06-04 23:03:01] 2025-06-04 20:45:44,414 | INFO     | all payload control threads have been joined
[2025-06-04 23:03:01] 2025-06-04 20:45:44,465 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:44,466 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:44,473 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:44,607 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:44,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:03:01] 2025-06-04 20:45:44,801 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:44,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:03:01] 2025-06-04 20:45:45,006 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:45,154 | INFO     | [data] control thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:45,219 | INFO     | [job] validate thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:45,300 | INFO     | [job] control thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:45,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:45,409 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:45,420 | INFO     | [payload] control thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:45,530 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:45,940 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:46,618 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:46,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:03:01] 2025-06-04 20:45:50,666 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:03:01] 2025-06-04 20:45:50,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698908940096)>', '<ExcThread(monitor, started 140697952839424)>']
[2025-06-04 23:03:01] 2025-06-04 20:45:50,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:03:01] 2025-06-04 20:45:50,889 | INFO     | [monitor] control thread has ended
[2025-06-04 23:03:01] 2025-06-04 20:45:55,710 | INFO     | all workflow threads have been joined
[2025-06-04 23:03:01] 2025-06-04 20:45:55,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:03:01] 2025-06-04 20:45:55,711 | INFO     | traces error code: 0
[2025-06-04 23:03:01] 2025-06-04 20:45:55,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:03:01] 2025-06-04 20:45:56,052 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:03:01] 2025-06-04 20:45:56,129 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:03:01] 2025-06-04 20:45:56,211 [wrapper] pilotpid: 8364
[2025-06-04 23:03:01] 2025-06-04 20:45:56,308 [wrapper] Pilot exit status: 0
[2025-06-04 23:03:01] 2025-06-04 20:45:56,813 [wrapper] pandaids: 6678364794
[2025-06-04 23:03:01] 2025-06-04 20:45:57,865 [wrapper] cleanup supervisor_pilot 19996 8365
[2025-06-04 23:03:01] 2025-06-04 20:45:58,003 [wrapper] Test setup, not cleaning
[2025-06-04 23:03:01] 2025-06-04 20:45:58,111 [wrapper] apfmon messages muted
[2025-06-04 23:03:01] 2025-06-04 20:45:58,244 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:03:01] 2025-06-04 20:45:58,347 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:03:01]  *** Error codes and diagnostics ***
[2025-06-04 23:03:01]     "exeErrorCode": 0,
[2025-06-04 23:03:01]     "exeErrorDiag": "",
[2025-06-04 23:03:01]     "pilotErrorCode": 0,
[2025-06-04 23:03:01]     "pilotErrorDiag": "",
[2025-06-04 23:03:01]  *** Listing of results directory ***
[2025-06-04 23:03:01] total 398856
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-04 23:03:01] -rwx------. 1 boinc boinc     37140 Jun  4 08:31 runpilot2-wrapper.sh
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc      5111 Jun  4 08:31 queuedata.json
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:03:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:43 run_atlas
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:43 job.xml
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc      6391 Jun  4 18:43 init_data.xml
[2025-06-04 23:03:01] -rw-r--r--. 2 boinc boinc 217515850 Jun  4 18:43 EVNT.45006593._002172.pool.root.1
[2025-06-04 23:03:01] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:43 start_atlas.sh
[2025-06-04 23:03:01] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:43 shared
[2025-06-04 23:03:01] -rw-r--r--. 2 boinc boinc    508882 Jun  4 18:43 input.tar.gz
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:43 boinc_lockfile
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc      2525 Jun  4 18:43 pandaJob.out
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc    990984 Jun  4 18:44 agis_schedconf.cvmfs.json
[2025-06-04 23:03:01] drwx------. 4 boinc boinc      4096 Jun  4 18:44 pilot3
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc 183819133 Jun  4 22:42 HITS.45006595._054278.pool.root.1
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc       531 Jun  4 22:43 boinc_task_state.xml
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc      1017 Jun  4 22:44 memory_monitor_summary.json
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc   1598969 Jun  4 22:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc    396572 Jun  4 22:44 log.45006595._054278.job.log.tgz.1
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc        95 Jun  4 22:44 pilot_heartbeat.json
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc      7685 Jun  4 22:45 heartbeat.json
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc      4416 Jun  4 22:45 pilotlog.txt
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc   1240680 Jun  4 22:45 log.45006595._054278.job.log.1
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc       357 Jun  4 22:45 output.list
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:45 runtime_log
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc   1658880 Jun  4 22:45 result.tar.gz
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc      8659 Jun  4 22:46 runtime_log.err
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc       656 Jun  4 22:46 BuGLDm6pwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmHsaKDmjpQwYn.diag
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc      8192 Jun  4 23:03 boinc_mmap_file
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc        28 Jun  4 23:03 wrapper_checkpoint.txt
[2025-06-04 23:03:01] -rw-r--r--. 1 boinc boinc     20521 Jun  4 23:03 stderr.txt
[2025-06-04 23:03:01] HITS file was successfully produced:
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc 183819133 Jun  4 22:42 shared/HITS.pool.root.1
[2025-06-04 23:03:01]  *** Contents of shared directory: ***
[2025-06-04 23:03:01] total 394068
[2025-06-04 23:03:01] -rw-r--r--. 2 boinc boinc 217515850 Jun  4 18:43 ATLAS.root_0
[2025-06-04 23:03:01] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:43 start_atlas.sh
[2025-06-04 23:03:01] -rw-r--r--. 2 boinc boinc    508882 Jun  4 18:43 input.tar.gz
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc 183819133 Jun  4 22:42 HITS.pool.root.1
[2025-06-04 23:03:01] -rw-------. 1 boinc boinc   1658880 Jun  4 22:45 result.tar.gz
23:03:03 (31805): run_atlas exited; CPU time 52417.805801
23:03:03 (31805): called boinc_finish(0)

</stderr_txt>
]]>

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