Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:02:48 (1144597): wrapper (7.7.26015): starting
11:02:48 (1144597): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 11:02:48] Arguments: --nthreads 4
[2025-06-06 11:02:48] Threads: 4
[2025-06-06 11:02:48] Checking for CVMFS
[2025-06-06 11:02:48] No cvmfs_config command found, will try listing directly
[2025-06-06 11:02:48] CVMFS is ok
[2025-06-06 11:02:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:02:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 11:02:48] Further information can be found at the LHC@home message board.
[2025-06-06 11:02:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:02:48] Checking for apptainer binary...
[2025-06-06 11:02:48] which: no apptainer in ((null))
[2025-06-06 11:02:48] apptainer is not installed, using version from CVMFS
[2025-06-06 11:02:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:02:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 11:02:48] apptainer works
[2025-06-06 11:02:48] Set ATHENA_PROC_NUMBER=4
[2025-06-06 11:02:48] Set ATHENA_CORE_NUMBER=4
[2025-06-06 11:02:48] Starting ATLAS job with PandaID=6678364760
[2025-06-06 11:02:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:07:20]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:07:20] 2025-06-06 11:02:03,569 | INFO     | PID=1148306 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 13:07:20] 2025-06-06 11:02:03,569 | INFO     | .. there are 4 such processes running
[2025-06-06 13:07:20] 2025-06-06 11:02:03,894 | INFO     | monitor loop #527: job 0:6678364760 is in state 'finished'
[2025-06-06 13:07:20] 2025-06-06 11:02:03,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,397 | INFO     | monitor loop #528: job 0:6678364760 is in state 'finished'
[2025-06-06 13:07:20] 2025-06-06 11:02:06,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,654 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 13:07:20] 2025-06-06 11:02:06,654 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6678364760/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,655 | INFO     | extracted standard info from prmon json
[2025-06-06 13:07:20] 2025-06-06 11:02:06,655 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 13:07:20] 2025-06-06 11:02:06,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:07:20] 2025-06-06 11:02:06,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:07:20] 2025-06-06 11:02:06,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:07:20] 2025-06-06 11:02:06,659 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:07:20] 2025-06-06 11:02:06,659 | INFO     | sum of square deviations: 496597218.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,660 | INFO     | sum of deviations: 12357864035.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,660 | INFO     | mean x: 1749204143.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,660 | INFO     | mean y: 2331240.2136752135
[2025-06-06 13:07:20] 2025-06-06 11:02:06,660 | INFO     | -- intersect: -43526762731.98151
[2025-06-06 13:07:20] 2025-06-06 11:02:06,660 | INFO     | intersect: -43526762731.98151
[2025-06-06 13:07:20] 2025-06-06 11:02:06,660 | INFO     | chi2: 1.4651557545783287
[2025-06-06 13:07:20] 2025-06-06 11:02:06,661 | INFO     | sum of square deviations: 435610028.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,661 | INFO     | sum of deviations: 12367385677.500002
[2025-06-06 13:07:20] 2025-06-06 11:02:06,661 | INFO     | mean x: 1749203990.5
[2025-06-06 13:07:20] 2025-06-06 11:02:06,661 | INFO     | mean y: 2331264.0446428573
[2025-06-06 13:07:20] 2025-06-06 11:02:06,662 | INFO     | -- intersect: -49659244431.21357
[2025-06-06 13:07:20] 2025-06-06 11:02:06,662 | INFO     | intersect: -49659244431.21357
[2025-06-06 13:07:20] 2025-06-06 11:02:06,662 | INFO     | chi2: 1.465617658950236
[2025-06-06 13:07:20] 2025-06-06 11:02:06,662 | INFO     | current chi2=1.465617658950236 (change=-0.03152595691373049 %)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,662 | INFO     | right removable region: 111
[2025-06-06 13:07:20] 2025-06-06 11:02:06,662 | INFO     | sum of square deviations: 435610028.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,663 | INFO     | sum of deviations: -4241766150.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,663 | INFO     | mean x: 1749204295.5
[2025-06-06 13:07:20] 2025-06-06 11:02:06,663 | INFO     | mean y: 2371955.1785714286
[2025-06-06 13:07:20] 2025-06-06 11:02:06,663 | INFO     | -- intersect: 17035303001.675272
[2025-06-06 13:07:20] 2025-06-06 11:02:06,663 | INFO     | intersect: 17035303001.675272
[2025-06-06 13:07:20] 2025-06-06 11:02:06,663 | INFO     | chi2: 0.019058267091260725
[2025-06-06 13:07:20] 2025-06-06 11:02:06,664 | INFO     | current chi2=0.019058267091260725 (change=98.69923269033293 %)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,664 | INFO     | sum of square deviations: 379832238.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,664 | INFO     | sum of deviations: -4465807804.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,664 | INFO     | mean x: 1749204448.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,665 | INFO     | mean y: 2372557.644859813
[2025-06-06 13:07:20] 2025-06-06 11:02:06,665 | INFO     | -- intersect: 20568322714.487293
[2025-06-06 13:07:20] 2025-06-06 11:02:06,665 | INFO     | intersect: 20568322714.487293
[2025-06-06 13:07:20] 2025-06-06 11:02:06,665 | INFO     | chi2: 0.016835243791417615
[2025-06-06 13:07:20] 2025-06-06 11:02:06,665 | INFO     | current chi2=0.016835243791417615 (change=11.664351691568482 %)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,665 | INFO     | left removable region: 20
[2025-06-06 13:07:20] 2025-06-06 11:02:06,665 | INFO     | sum of square deviations: 233641590.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,666 | INFO     | sum of deviations: -3389924818.0000005
[2025-06-06 13:07:20] 2025-06-06 11:02:06,666 | INFO     | mean x: 1749204570.0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,666 | INFO     | mean y: 2374095.8571428573
[2025-06-06 13:07:20] 2025-06-06 11:02:06,666 | INFO     | -- intersect: 25381725364.61892
[2025-06-06 13:07:20] 2025-06-06 11:02:06,666 | INFO     | intersect: 25381725364.61892
[2025-06-06 13:07:20] 2025-06-06 11:02:06,666 | INFO     | chi2: 0.015216421253792191
[2025-06-06 13:07:20] 2025-06-06 11:02:06,667 | INFO     | -- intersect: 25381725364.61892
[2025-06-06 13:07:20] 2025-06-06 11:02:06,667 | INFO     | current memory leak: -14.51 B/s (using 91 data points, chi2=0.02)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,667 | INFO     | ..............................
[2025-06-06 13:07:20] 2025-06-06 11:02:06,667 | INFO     | . Timing measurements:
[2025-06-06 13:07:20] 2025-06-06 11:02:06,668 | INFO     | . get job = 0 s
[2025-06-06 13:07:20] 2025-06-06 11:02:06,668 | INFO     | . initial setup = 1 s
[2025-06-06 13:07:20] 2025-06-06 11:02:06,668 | INFO     | . payload setup = 7 s
[2025-06-06 13:07:20] 2025-06-06 11:02:06,668 | INFO     | . stage-in = 0 s
[2025-06-06 13:07:20] 2025-06-06 11:02:06,668 | INFO     | . payload execution = 7117 s
[2025-06-06 13:07:20] 2025-06-06 11:02:06,669 | INFO     | . stage-out = 0 s
[2025-06-06 13:07:20] 2025-06-06 11:02:06,669 | INFO     | . log creation = 0 s
[2025-06-06 13:07:20] 2025-06-06 11:02:06,669 | INFO     | ..............................
[2025-06-06 13:07:20] 2025-06-06 11:02:06,772 | INFO     | 
[2025-06-06 13:07:20] 2025-06-06 11:02:06,772 | INFO     | job summary report
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | --------------------------------------------------
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | PanDA job id: 6678364760
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | task id: 45006595
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | errors: (none)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | pilot state: finished 
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | transexitcode: 0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | exeerrorcode: 0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | exeerrordiag: 
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | exitcode: 0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | exitmsg: OK
[2025-06-06 13:07:20] 2025-06-06 11:02:06,773 | INFO     | cpuconsumptiontime: 27334 s
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | nevents: 400
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | neventsw: 0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | pid: 1157569
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | pgrp: 1157569
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | corecount: 4
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | event service: False
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | sizes: {0: 2397353, 4: 2397559, 11: 2397587, 7128: 2424808, 7129: 2433827, 7133: 2433941}
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | --------------------------------------------------
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | 
[2025-06-06 13:07:20] 2025-06-06 11:02:06,774 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-06 13:07:20] 2025-06-06 11:02:06,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,794 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,794 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,794 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,795 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,796 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:07:20] 2025-06-06 11:02:06,796 | INFO     | job 6678364760 has completed (purged errors)
[2025-06-06 13:07:20] 2025-06-06 11:02:06,796 | INFO     | overall cleanup function is called
[2025-06-06 13:07:20] 2025-06-06 11:02:07,804 | INFO     | --- collectZombieJob: --- 10, [1157569]
[2025-06-06 13:07:20] 2025-06-06 11:02:07,804 | INFO     | zombie collector waiting for pid 1157569
[2025-06-06 13:07:20] 2025-06-06 11:02:07,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:07:20] 2025-06-06 11:02:07,804 | INFO     | collected zombie processes
[2025-06-06 13:07:20] 2025-06-06 11:02:07,804 | INFO     | will attempt to kill all subprocesses of pid=1157569
[2025-06-06 13:07:20] 2025-06-06 11:02:08,106 | INFO     | process IDs to be killed: [1157569] (in reverse order)
[2025-06-06 13:07:20] 2025-06-06 11:02:08,198 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:07:20] 2025-06-06 11:02:08,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:07:20] 2025-06-06 11:02:08,208 | INFO     | did not find any defunct processes belonging to 1157569
[2025-06-06 13:07:20] 2025-06-06 11:02:08,216 | INFO     | did not find any defunct processes belonging to 1157569
[2025-06-06 13:07:20] 2025-06-06 11:02:08,217 | INFO     | ready for new job
[2025-06-06 13:07:20] 2025-06-06 11:02:08,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:07:20] 2025-06-06 11:02:08,218 | INFO     | **************************************
[2025-06-06 13:07:20] 2025-06-06 11:02:08,219 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:07:20] 2025-06-06 11:02:08,219 | INFO     | **************************************
[2025-06-06 13:07:20] 2025-06-06 11:02:08,219 | INFO     | 
[2025-06-06 13:07:20] 2025-06-06 11:02:08,222 | INFO     | architecture information:
[2025-06-06 13:07:20] 2025-06-06 11:02:08,223 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:07:20] 2025-06-06 11:02:08,236 | INFO     | cat /etc/os-release:
[2025-06-06 13:07:20] NAME="CentOS Linux"
[2025-06-06 13:07:20] VERSION="7 (Core)"
[2025-06-06 13:07:20] ID="centos"
[2025-06-06 13:07:20] ID_LIKE="rhel fedora"
[2025-06-06 13:07:20] VERSION_ID="7"
[2025-06-06 13:07:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:07:20] ANSI_COLOR="0;31"
[2025-06-06 13:07:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:07:20] HOME_URL="https://www.centos.org/"
[2025-06-06 13:07:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:07:20] 
[2025-06-06 13:07:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:07:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:07:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:07:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:07:20] 
[2025-06-06 13:07:20] 2025-06-06 11:02:08,236 | INFO     | **************************************
[2025-06-06 13:07:20] 2025-06-06 11:02:08,739 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-06 13:07:20] 2025-06-06 11:02:08,755 | INFO     | sufficient remaining disk space (657923768320 B)
[2025-06-06 13:07:20] 2025-06-06 11:02:08,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:07:20] 2025-06-06 11:02:08,756 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:07:20] 2025-06-06 11:02:08,756 | INFO     | update_server=False
[2025-06-06 13:07:20] 2025-06-06 11:02:08,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:07:20] 2025-06-06 11:02:08,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:07:20] 2025-06-06 11:02:08,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:07:20] 2025-06-06 11:02:08,901 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 13:07:20] 2025-06-06 11:02:08,901 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 13:07:20] 2025-06-06 11:02:08,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:07:20] 2025-06-06 11:02:08,901 | INFO     | will abort loop
[2025-06-06 13:07:20] 2025-06-06 11:02:08,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:07:20] 2025-06-06 11:02:09,380 | INFO     | all data control threads have been joined
[2025-06-06 13:07:20] 2025-06-06 11:02:09,527 | INFO     | all payload control threads have been joined
[2025-06-06 13:07:20] 2025-06-06 11:02:09,584 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:07:20] 2025-06-06 11:02:09,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:07:20] 2025-06-06 11:02:09,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:07:20] 2025-06-06 11:02:09,761 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:09,762 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:09,907 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:09,988 | INFO     | [job] validate thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:10,062 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:10,217 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:10,330 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:10,385 | INFO     | [data] control thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:10,428 | INFO     | all job control threads have been joined
[2025-06-06 13:07:20] 2025-06-06 11:02:10,445 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:10,531 | INFO     | [payload] control thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:10,762 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:10,774 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:10,928 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:11,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:11,433 | INFO     | [job] control thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:12,938 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:07:20] 2025-06-06 11:02:14,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22437919868736)>', '<ExcThread(monitor, started 22437680871168)>']
[2025-06-06 13:07:20] 2025-06-06 11:02:14,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:07:20] 2025-06-06 11:02:14,610 | INFO     | [monitor] control thread has ended
[2025-06-06 13:07:20] 2025-06-06 11:02:19,184 | INFO     | all workflow threads have been joined
[2025-06-06 13:07:20] 2025-06-06 11:02:19,184 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:07:20] 2025-06-06 11:02:19,185 | INFO     | traces error code: 0
[2025-06-06 13:07:20] 2025-06-06 11:02:19,185 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:07:20] 2025-06-06 11:02:19,345 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:07:20] 2025-06-06 11:02:19,348 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:07:20] 2025-06-06 11:02:19,351 [wrapper] pilotpid: 1148306
[2025-06-06 13:07:20] 2025-06-06 11:02:19,353 [wrapper] Pilot exit status: 0
[2025-06-06 13:07:20] 2025-06-06 11:02:19,363 [wrapper] pandaids: 6678364760
[2025-06-06 13:07:20] 2025-06-06 11:02:19,422 [wrapper] cleanup supervisor_pilot 1277950 1148307
[2025-06-06 13:07:20] 2025-06-06 11:02:19,425 [wrapper] Test setup, not cleaning
[2025-06-06 13:07:20] 2025-06-06 11:02:19,428 [wrapper] apfmon messages muted
[2025-06-06 13:07:20] 2025-06-06 11:02:19,431 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:07:20] 2025-06-06 11:02:19,434 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:07:20]  *** Error codes and diagnostics ***
[2025-06-06 13:07:20]     "exeErrorCode": 0,
[2025-06-06 13:07:20]     "exeErrorDiag": "",
[2025-06-06 13:07:20]     "pilotErrorCode": 0,
[2025-06-06 13:07:20]     "pilotErrorDiag": "",
[2025-06-06 13:07:20]  *** Listing of results directory ***
[2025-06-06 13:07:20] total 385076
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-06 13:07:20] -rwx------ 1 boinc boinc     37140 Jun  4 08:31 runpilot2-wrapper.sh
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:31 queuedata.json
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc       100 Jun  6 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:07:20] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:02 run_atlas
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc       105 Jun  6 11:02 job.xml
[2025-06-06 13:07:20] -rw-r--r-- 2 boinc boinc 213693393 Jun  6 11:02 EVNT.45006593._002171.pool.root.1
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc      6635 Jun  6 11:02 init_data.xml
[2025-06-06 13:07:20] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:02 start_atlas.sh
[2025-06-06 13:07:20] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:02 shared
[2025-06-06 13:07:20] -rw-r--r-- 2 boinc boinc    508876 Jun  6 11:02 input.tar.gz
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc         0 Jun  6 11:02 boinc_lockfile
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc      2525 Jun  6 11:02 pandaJob.out
[2025-06-06 13:07:20] -rw------- 1 boinc boinc    987967 Jun  6 11:02 agis_schedconf.cvmfs.json
[2025-06-06 13:07:20] -rw------- 1 boinc boinc   1598969 Jun  6 11:02 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:07:20] drwx------ 4 boinc boinc      4096 Jun  6 11:02 pilot3
[2025-06-06 13:07:20] -rw------- 1 boinc boinc        95 Jun  6 13:01 pilot_heartbeat.json
[2025-06-06 13:07:20] -rw------- 1 boinc boinc 174882442 Jun  6 13:01 HITS.45006595._054244.pool.root.1
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc       528 Jun  6 13:01 boinc_task_state.xml
[2025-06-06 13:07:20] -rw------- 1 boinc boinc      1033 Jun  6 13:01 memory_monitor_summary.json
[2025-06-06 13:07:20] -rw------- 1 boinc boinc    265690 Jun  6 13:02 log.45006595._054244.job.log.tgz.1
[2025-06-06 13:07:20] -rw------- 1 boinc boinc      7726 Jun  6 13:02 heartbeat.json
[2025-06-06 13:07:20] -rw------- 1 boinc boinc      4549 Jun  6 13:02 pilotlog.txt
[2025-06-06 13:07:20] -rw------- 1 boinc boinc    685469 Jun  6 13:02 log.45006595._054244.job.log.1
[2025-06-06 13:07:20] -rw------- 1 boinc boinc       357 Jun  6 13:02 output.list
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc       620 Jun  6 13:02 runtime_log
[2025-06-06 13:07:20] -rw------- 1 boinc boinc    972800 Jun  6 13:02 result.tar.gz
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc      9025 Jun  6 13:02 runtime_log.err
[2025-06-06 13:07:20] -rw------- 1 boinc boinc       661 Jun  6 13:02 rhOKDm6pwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkraKDmOcVWbn.diag
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc        26 Jun  6 13:06 wrapper_checkpoint.txt
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc      8192 Jun  6 13:07 boinc_mmap_file
[2025-06-06 13:07:20] -rw-r--r-- 1 boinc boinc     20895 Jun  6 13:07 stderr.txt
[2025-06-06 13:07:20] HITS file was successfully produced:
[2025-06-06 13:07:20] -rw------- 1 boinc boinc 174882442 Jun  6 13:01 shared/HITS.pool.root.1
[2025-06-06 13:07:20]  *** Contents of shared directory: ***
[2025-06-06 13:07:20] total 380948
[2025-06-06 13:07:20] -rw-r--r-- 2 boinc boinc 213693393 Jun  6 11:02 ATLAS.root_0
[2025-06-06 13:07:20] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:02 start_atlas.sh
[2025-06-06 13:07:20] -rw-r--r-- 2 boinc boinc    508876 Jun  6 11:02 input.tar.gz
[2025-06-06 13:07:20] -rw------- 1 boinc boinc 174882442 Jun  6 13:01 HITS.pool.root.1
[2025-06-06 13:07:20] -rw------- 1 boinc boinc    972800 Jun  6 13:02 result.tar.gz
13:07:22 (1144597): run_atlas exited; CPU time 27595.845843
13:07:22 (1144597): called boinc_finish(0)

</stderr_txt>
]]>

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