Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:51:29 (19850): wrapper (7.7.26015): starting
04:51:29 (19850): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 04:51:29] Arguments: --nthreads 10
[2025-06-04 04:51:29] Threads: 10
[2025-06-04 04:51:29] Checking for CVMFS
[2025-06-04 04:51:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:51:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:51:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:51:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:51:33] 2.11.2.0 39542 136982 356764 146773 2 269 14475342 18432000 8622 130560 0 102156312 99.317 163263148 35181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 04:51:33] CVMFS is ok
[2025-06-04 04:51:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:51:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:51:33] Further information can be found at the LHC@home message board.
[2025-06-04 04:51:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:51:33] Checking for apptainer binary...
[2025-06-04 04:51:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:51:33] Running /usr/bin/apptainer --version
[2025-06-04 04:51:34] apptainer version 1.3.2-1.el7
[2025-06-04 04:51:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:52:08] c-211-25.aglt2.org
[2025-06-04 04:52:08] apptainer works
[2025-06-04 04:52:08] Set ATHENA_PROC_NUMBER=10
[2025-06-04 04:52:08] Set ATHENA_CORE_NUMBER=10
[2025-06-04 04:52:08] Starting ATLAS job with PandaID=6678364753
[2025-06-04 04:52:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:02:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:02:04] 2025-06-04 20:01:39,703 | INFO     | .. there are 7 such processes running
[2025-06-04 16:02:04] 2025-06-04 20:01:39,715 | INFO     | sum of deviations: 668707473988.932
[2025-06-04 16:02:04] 2025-06-04 20:01:39,715 | INFO     | mean x: 1749047431.9644513
[2025-06-04 16:02:04] 2025-06-04 20:01:39,715 | INFO     | mean y: 2491125.3013910353
[2025-06-04 16:02:04] 2025-06-04 20:01:39,716 | INFO     | -- intersect: -13924129229.433681
[2025-06-04 16:02:04] 2025-06-04 20:01:39,716 | INFO     | intersect: -13924129229.433681
[2025-06-04 16:02:04] 2025-06-04 20:01:39,717 | INFO     | chi2: 13.436532722875832
[2025-06-04 16:02:04] 2025-06-04 20:01:39,717 | INFO     | sum of square deviations: 82051190769.87624
[2025-06-04 16:02:04] 2025-06-04 20:01:39,754 | INFO     | sum of deviations: 798513987458.3232
[2025-06-04 16:02:04] 2025-06-04 20:01:39,754 | INFO     | mean x: 1749047279.4688473
[2025-06-04 16:02:04] 2025-06-04 20:01:39,754 | INFO     | mean y: 2501338.816199377
[2025-06-04 16:02:04] 2025-06-04 20:01:39,754 | INFO     | -- intersect: -17019051965.618656
[2025-06-04 16:02:04] 2025-06-04 20:01:39,755 | INFO     | intersect: -17019051965.618656
[2025-06-04 16:02:04] 2025-06-04 20:01:39,756 | INFO     | chi2: 11.080001669376493
[2025-06-04 16:02:04] 2025-06-04 20:01:39,756 | INFO     | current chi2=11.080001669376493 (change=17.538237744082004 %)
[2025-06-04 16:02:04] 2025-06-04 20:01:39,756 | INFO     | right removable region: 641
[2025-06-04 16:02:04] 2025-06-04 20:01:39,765 | INFO     | sum of square deviations: 82050888575.99545
[2025-06-04 16:02:04] 2025-06-04 20:01:39,792 | INFO     | sum of deviations: 430871257244.9396
[2025-06-04 16:02:04] 2025-06-04 20:01:39,792 | INFO     | mean x: 1749047584.4719627
[2025-06-04 16:02:04] 2025-06-04 20:01:39,792 | INFO     | mean y: 2509894.468847352
[2025-06-04 16:02:04] 2025-06-04 20:01:39,800 | INFO     | -- intersect: -9182208818.292713
[2025-06-04 16:02:04] 2025-06-04 20:01:39,801 | INFO     | intersect: -9182208818.292713
[2025-06-04 16:02:04] 2025-06-04 20:01:39,802 | INFO     | chi2: 8.39557476144449
[2025-06-04 16:02:04] 2025-06-04 20:01:39,802 | INFO     | current chi2=8.39557476144449 (change=37.516806347288245 %)
[2025-06-04 16:02:04] 2025-06-04 20:01:39,803 | INFO     | sum of square deviations: 80148513748.73457
[2025-06-04 16:02:04] 2025-06-04 20:01:39,835 | INFO     | sum of deviations: 236119858173.1434
[2025-06-04 16:02:04] 2025-06-04 20:01:39,835 | INFO     | mean x: 1749047736.9795918
[2025-06-04 16:02:04] 2025-06-04 20:01:39,835 | INFO     | mean y: 2525502.9340659343
[2025-06-04 16:02:04] 2025-06-04 20:01:39,835 | INFO     | -- intersect: -5150220122.373291
[2025-06-04 16:02:04] 2025-06-04 20:01:39,835 | INFO     | intersect: -5150220122.373291
[2025-06-04 16:02:04] 2025-06-04 20:01:39,836 | INFO     | chi2: 5.161399460313313
[2025-06-04 16:02:04] 2025-06-04 20:01:39,837 | INFO     | current chi2=5.161399460313313 (change=38.52238105226193 %)
[2025-06-04 16:02:04] 2025-06-04 20:01:39,846 | INFO     | sum of square deviations: 78275806241.87177
[2025-06-04 16:02:04] 2025-06-04 20:01:39,873 | INFO     | sum of deviations: 93690401037.78171
[2025-06-04 16:02:04] 2025-06-04 20:01:39,873 | INFO     | mean x: 1749047889.4857595
[2025-06-04 16:02:04] 2025-06-04 20:01:39,873 | INFO     | mean y: 2537096.6424050634
[2025-06-04 16:02:04] 2025-06-04 20:01:39,873 | INFO     | -- intersect: -2090944990.196181
[2025-06-04 16:02:04] 2025-06-04 20:01:39,882 | INFO     | intersect: -2090944990.196181
[2025-06-04 16:02:04] 2025-06-04 20:01:39,883 | INFO     | chi2: 3.4725039239732505
[2025-06-04 16:02:04] 2025-06-04 20:01:39,883 | INFO     | current chi2=3.4725039239732505 (change=32.72165910285001 %)
[2025-06-04 16:02:04] 2025-06-04 20:01:39,884 | INFO     | sum of square deviations: 76432532821.9427
[2025-06-04 16:02:04] 2025-06-04 20:01:39,914 | INFO     | sum of deviations: 13259629851.004913
[2025-06-04 16:02:04] 2025-06-04 20:01:39,915 | INFO     | mean x: 1749048041.9904306
[2025-06-04 16:02:04] 2025-06-04 20:01:39,915 | INFO     | mean y: 2543750.1674641147
[2025-06-04 16:02:04] 2025-06-04 20:01:39,915 | INFO     | -- intersect: -300883714.1878711
[2025-06-04 16:02:04] 2025-06-04 20:01:39,915 | INFO     | intersect: -300883714.1878711
[2025-06-04 16:02:04] 2025-06-04 20:01:39,916 | INFO     | chi2: 2.949811786094817
[2025-06-04 16:02:04] 2025-06-04 20:01:39,916 | INFO     | current chi2=2.949811786094817 (change=15.052312375225979 %)
[2025-06-04 16:02:04] 2025-06-04 20:01:39,916 | INFO     | left removable region: 40
[2025-06-04 16:02:04] 2025-06-04 20:01:39,921 | INFO     | sum of square deviations: 67312512105.76054
[2025-06-04 16:02:04] 2025-06-04 20:01:39,940 | INFO     | sum of deviations: 30103943884.482533
[2025-06-04 16:02:04] 2025-06-04 20:01:39,941 | INFO     | mean x: 1749048469.0199668
[2025-06-04 16:02:04] 2025-06-04 20:01:39,941 | INFO     | mean y: 2564508.126455907
[2025-06-04 16:02:04] 2025-06-04 20:01:39,941 | INFO     | -- intersect: -779656438.8482916
[2025-06-04 16:02:04] 2025-06-04 20:01:39,945 | INFO     | intersect: -779656438.8482916
[2025-06-04 16:02:04] 2025-06-04 20:01:39,946 | INFO     | chi2: 0.006630549785806093
[2025-06-04 16:02:04] 2025-06-04 20:01:39,947 | INFO     | -- intersect: -779656438.8482916
[2025-06-04 16:02:04] 2025-06-04 20:01:39,948 | INFO     | current memory leak: 0.45 B/s (using 601 data points, chi2=0.01)
[2025-06-04 16:02:04] 2025-06-04 20:01:39,949 | INFO     | ..............................
[2025-06-04 16:02:04] 2025-06-04 20:01:39,949 | INFO     | . Timing measurements:
[2025-06-04 16:02:04] 2025-06-04 20:01:39,949 | INFO     | . get job = 0 s
[2025-06-04 16:02:04] 2025-06-04 20:01:39,949 | INFO     | . initial setup = 13 s
[2025-06-04 16:02:04] 2025-06-04 20:01:39,949 | INFO     | . payload setup = 178 s
[2025-06-04 16:02:04] 2025-06-04 20:01:39,950 | INFO     | . stage-in = 1 s
[2025-06-04 16:02:04] 2025-06-04 20:01:39,950 | INFO     | . payload execution = 39574 s
[2025-06-04 16:02:04] 2025-06-04 20:01:39,950 | INFO     | . stage-out = 15 s
[2025-06-04 16:02:04] 2025-06-04 20:01:39,950 | INFO     | . log creation = 3 s
[2025-06-04 16:02:04] 2025-06-04 20:01:39,950 | INFO     | ..............................
[2025-06-04 16:02:04] 2025-06-04 20:01:40,856 | INFO     | 
[2025-06-04 16:02:04] 2025-06-04 20:01:40,857 | INFO     | job summary report
[2025-06-04 16:02:04] 2025-06-04 20:01:40,857 | INFO     | --------------------------------------------------
[2025-06-04 16:02:04] 2025-06-04 20:01:40,857 | INFO     | PanDA job id: 6678364753
[2025-06-04 16:02:04] 2025-06-04 20:01:40,880 | INFO     | task id: 45006595
[2025-06-04 16:02:04] 2025-06-04 20:01:40,881 | INFO     | errors: (none)
[2025-06-04 16:02:04] 2025-06-04 20:01:40,881 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:02:04] 2025-06-04 20:01:40,881 | INFO     | pilot state: finished 
[2025-06-04 16:02:04] 2025-06-04 20:01:40,921 | INFO     | transexitcode: 0
[2025-06-04 16:02:04] 2025-06-04 20:01:40,922 | INFO     | exeerrorcode: 0
[2025-06-04 16:02:04] 2025-06-04 20:01:40,922 | INFO     | exeerrordiag: 
[2025-06-04 16:02:04] 2025-06-04 20:01:40,922 | INFO     | exitcode: 0
[2025-06-04 16:02:04] 2025-06-04 20:01:40,964 | INFO     | exitmsg: OK
[2025-06-04 16:02:04] 2025-06-04 20:01:40,964 | INFO     | cpuconsumptiontime: 73454 s
[2025-06-04 16:02:04] 2025-06-04 20:01:40,964 | INFO     | nevents: 400
[2025-06-04 16:02:04] 2025-06-04 20:01:40,964 | INFO     | neventsw: 0
[2025-06-04 16:02:04] 2025-06-04 20:01:40,964 | INFO     | pid: 40944
[2025-06-04 16:02:04] 2025-06-04 20:01:40,965 | INFO     | pgrp: 40944
[2025-06-04 16:02:04] 2025-06-04 20:01:40,965 | INFO     | corecount: 10
[2025-06-04 16:02:04] 2025-06-04 20:01:40,965 | INFO     | event service: False
[2025-06-04 16:02:04] 2025-06-04 20:01:40,965 | INFO     | sizes: {0: 2404356, 2: 2404957, 3: 2405069, 4: 2405268, 17: 2405268, 28: 2405296, 39: 2405452, 51: 2405480, 62: 2405508, 70: 2405742, 74: 2405770, 39761: 2447238, 
[2025-06-04 16:02:04] 2025-06-04 20:01:40,965 | INFO     | --------------------------------------------------
[2025-06-04 16:02:04] 2025-06-04 20:01:40,989 | INFO     | 
[2025-06-04 16:02:04] 2025-06-04 20:01:40,990 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 16:02:04] 2025-06-04 20:01:41,448 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,462 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,462 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:02:04] 2025-06-04 20:01:41,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:02:04] 2025-06-04 20:01:41,513 | INFO     | job 6678364753 has completed (purged errors)
[2025-06-04 16:02:04] 2025-06-04 20:01:41,513 | INFO     | overall cleanup function is called
[2025-06-04 16:02:04] 2025-06-04 20:01:42,577 | INFO     | --- collectZombieJob: --- 10, [40944]
[2025-06-04 16:02:04] 2025-06-04 20:01:42,578 | INFO     | zombie collector waiting for pid 40944
[2025-06-04 16:02:04] 2025-06-04 20:01:42,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:02:04] 2025-06-04 20:01:42,578 | INFO     | collected zombie processes
[2025-06-04 16:02:04] 2025-06-04 20:01:42,589 | INFO     | will attempt to kill all subprocesses of pid=40944
[2025-06-04 16:02:04] 2025-06-04 20:01:46,027 | INFO     | process IDs to be killed: [40944] (in reverse order)
[2025-06-04 16:02:04] 2025-06-04 20:01:47,506 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:02:04] 2025-06-04 20:01:47,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:02:04] 2025-06-04 20:01:47,649 | INFO     | did not find any defunct processes belonging to 40944
[2025-06-04 16:02:04] 2025-06-04 20:01:47,771 | INFO     | did not find any defunct processes belonging to 40944
[2025-06-04 16:02:04] 2025-06-04 20:01:47,772 | INFO     | ready for new job
[2025-06-04 16:02:04] 2025-06-04 20:01:47,772 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:02:04] 2025-06-04 20:01:47,825 | INFO     | **************************************
[2025-06-04 16:02:04] 2025-06-04 20:01:47,825 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:02:04] 2025-06-04 20:01:47,826 | INFO     | **************************************
[2025-06-04 16:02:04] 2025-06-04 20:01:47,826 | INFO     | 
[2025-06-04 16:02:04] 2025-06-04 20:01:47,868 | INFO     | architecture information:
[2025-06-04 16:02:04] 2025-06-04 20:01:47,896 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:02:04] 2025-06-04 20:01:48,067 | INFO     | cat /etc/os-release:
[2025-06-04 16:02:04] NAME="CentOS Linux"
[2025-06-04 16:02:04] VERSION="7 (Core)"
[2025-06-04 16:02:04] ID="centos"
[2025-06-04 16:02:04] ID_LIKE="rhel fedora"
[2025-06-04 16:02:04] VERSION_ID="7"
[2025-06-04 16:02:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:02:04] ANSI_COLOR="0;31"
[2025-06-04 16:02:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:02:04] HOME_URL="https://www.centos.org/"
[2025-06-04 16:02:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:02:04] 
[2025-06-04 16:02:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:02:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:02:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:02:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:02:04] 
[2025-06-04 16:02:04] 2025-06-04 20:01:48,068 | INFO     | **************************************
[2025-06-04 16:02:04] 2025-06-04 20:01:48,572 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 16:02:04] 2025-06-04 20:01:49,015 | INFO     | sufficient remaining disk space (57025757184 B)
[2025-06-04 16:02:04] 2025-06-04 20:01:49,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:02:04] 2025-06-04 20:01:49,016 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:02:04] 2025-06-04 20:01:49,016 | INFO     | update_server=False
[2025-06-04 16:02:04] 2025-06-04 20:01:49,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:02:04] 2025-06-04 20:01:49,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:02:04] 2025-06-04 20:01:49,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:02:04] 2025-06-04 20:01:49,505 | INFO     | aborting loop
[2025-06-04 16:02:04] 2025-06-04 20:01:49,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:02:04] 2025-06-04 20:01:49,701 | INFO     | all data control threads have been joined
[2025-06-04 16:02:04] 2025-06-04 20:01:49,740 | INFO     | all job control threads have been joined
[2025-06-04 16:02:04] 2025-06-04 20:01:49,892 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:02:04] 2025-06-04 20:01:49,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:02:04] 2025-06-04 20:01:49,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:02:04] 2025-06-04 20:01:50,042 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,489 | INFO     | all payload control threads have been joined
[2025-06-04 16:02:04] 2025-06-04 20:01:50,511 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,579 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,611 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,708 | INFO     | [data] control thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,747 | INFO     | [job] control thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,795 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,805 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,824 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:50,833 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:51,058 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:51,496 | INFO     | [payload] control thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:51,497 | INFO     | [job] validate thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:51,579 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:51,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:02:04] 2025-06-04 20:01:55,627 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:02:04] 2025-06-04 20:01:55,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139786690008896)>', '<ExcThread(monitor, started 139785943377664)>']
[2025-06-04 16:02:04] 2025-06-04 20:01:55,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:02:04] 2025-06-04 20:01:55,928 | INFO     | [monitor] control thread has ended
[2025-06-04 16:02:04] 2025-06-04 20:02:00,825 | INFO     | all workflow threads have been joined
[2025-06-04 16:02:04] 2025-06-04 20:02:00,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:02:04] 2025-06-04 20:02:00,826 | INFO     | traces error code: 0
[2025-06-04 16:02:04] 2025-06-04 20:02:00,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:02:04] 2025-06-04 20:02:02,277 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:02:04] 2025-06-04 20:02:02,318 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:02:04] 2025-06-04 20:02:02,355 [wrapper] pilotpid: 28416
[2025-06-04 16:02:04] 2025-06-04 20:02:02,391 [wrapper] Pilot exit status: 0
[2025-06-04 16:02:04] 2025-06-04 20:02:02,586 [wrapper] pandaids: 6678364753
[2025-06-04 16:02:04] 2025-06-04 20:02:03,178 [wrapper] cleanup supervisor_pilot  3414 28417
[2025-06-04 16:02:04] 2025-06-04 20:02:03,226 [wrapper] Test setup, not cleaning
[2025-06-04 16:02:04] 2025-06-04 20:02:03,300 [wrapper] apfmon messages muted
[2025-06-04 16:02:04] 2025-06-04 20:02:03,352 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:02:04] 2025-06-04 20:02:03,400 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:02:04]  *** Error codes and diagnostics ***
[2025-06-04 16:02:04]     "exeErrorCode": 0,
[2025-06-04 16:02:04]     "exeErrorDiag": "",
[2025-06-04 16:02:04]     "pilotErrorCode": 0,
[2025-06-04 16:02:04]     "pilotErrorDiag": "",
[2025-06-04 16:02:04]  *** Listing of results directory ***
[2025-06-04 16:02:05] total 390044
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:31 queuedata.json
[2025-06-04 16:02:05] -rwx------ 1 boincer umatlas     37140 Jun  4 02:31 runpilot2-wrapper.sh
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas       100 Jun  4 04:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:02:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 04:51 run_atlas
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas       105 Jun  4 04:51 job.xml
[2025-06-04 16:02:05] -rw-r--r-- 2 boincer umatlas 213693393 Jun  4 04:51 EVNT.45006593._002171.pool.root.1
[2025-06-04 16:02:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:51 start_atlas.sh
[2025-06-04 16:02:05] drwxrwx--x 2 boincer umatlas      4096 Jun  4 04:51 shared
[2025-06-04 16:02:05] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 04:51 input.tar.gz
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas         0 Jun  4 04:51 boinc_lockfile
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 04:52 pandaJob.out
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas    986774 Jun  4 04:54 agis_schedconf.cvmfs.json
[2025-06-04 16:02:05] drwx------ 4 boincer umatlas      4096 Jun  4 04:55 pilot3
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas 174564325 Jun  4 15:55 HITS.45006595._054237.pool.root.1
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas      6036 Jun  4 15:56 init_data.xml
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas       531 Jun  4 15:56 boinc_task_state.xml
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas      1057 Jun  4 15:59 memory_monitor_summary.json
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas   1598969 Jun  4 16:00 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas    622920 Jun  4 16:00 log.45006595._054237.job.log.tgz.1
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas        95 Jun  4 16:01 pilot_heartbeat.json
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas      7752 Jun  4 16:01 heartbeat.json
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 16:01 boinc_mmap_file
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas        28 Jun  4 16:01 wrapper_checkpoint.txt
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas      4353 Jun  4 16:02 pilotlog.txt
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas   3033645 Jun  4 16:02 log.45006595._054237.job.log.1
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas       357 Jun  4 16:02 output.list
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas       620 Jun  4 16:02 runtime_log
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas   3676160 Jun  4 16:02 result.tar.gz
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas      8662 Jun  4 16:02 runtime_log.err
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas       664 Jun  4 16:02 dbPODm5pwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdraKDmwipfjn.diag
[2025-06-04 16:02:05] -rw-r--r-- 1 boincer umatlas     20822 Jun  4 16:02 stderr.txt
[2025-06-04 16:02:05] HITS file was successfully produced:
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas 174564325 Jun  4 15:55 shared/HITS.pool.root.1
[2025-06-04 16:02:05]  *** Contents of shared directory: ***
[2025-06-04 16:02:05] total 383276
[2025-06-04 16:02:05] -rw-r--r-- 2 boincer umatlas 213693393 Jun  4 04:51 ATLAS.root_0
[2025-06-04 16:02:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:51 start_atlas.sh
[2025-06-04 16:02:05] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 04:51 input.tar.gz
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas 174564325 Jun  4 15:55 HITS.pool.root.1
[2025-06-04 16:02:05] -rw------- 1 boincer umatlas   3676160 Jun  4 16:02 result.tar.gz
16:02:07 (19850): run_atlas exited; CPU time 74430.213856
16:02:07 (19850): called boinc_finish(0)

</stderr_txt>
]]>

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