Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:44:53 (14240): wrapper (7.7.26015): starting
18:44:53 (14240): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:44:54] Arguments: --nthreads 8
[2025-06-04 18:44:54] Threads: 8
[2025-06-04 18:44:54] Checking for CVMFS
[2025-06-04 18:44:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:44:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:44:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:44:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:44:55] 2.11.2.0 15047 33474 92620 146788 0 16 15188283 25165824 4297 130560 0 18343663 99.822 19623330 2086 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:44:55] CVMFS is ok
[2025-06-04 18:44:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:44:56] Checking for apptainer binary...
[2025-06-04 18:44:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:44:56] Running /usr/bin/apptainer --version
[2025-06-04 18:44:56] apptainer version 1.3.2-1.el7
[2025-06-04 18:44:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:10:09] cg-vwn358.simple-grid.lan
[2025-06-04 19:10:09] apptainer works
[2025-06-04 19:10:09] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:10:09] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:10:09] Starting ATLAS job with PandaID=6678364684
[2025-06-04 19:10:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:21:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:21:59] 2025-06-04 21:12:46,453 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:21:59] 2025-06-04 21:12:46,453 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:21:59] 2025-06-04 21:12:46,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:21:59] 2025-06-04 21:12:46,458 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:21:59] 2025-06-04 21:12:46,459 | INFO     | sum of square deviations: 4075741535.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,462 | INFO     | sum of deviations: 21256461014.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,462 | INFO     | mean x: 1749064266.5
[2025-06-04 23:21:59] 2025-06-04 21:12:46,462 | INFO     | mean y: 2461425.533898305
[2025-06-04 23:21:59] 2025-06-04 21:12:46,463 | INFO     | -- intersect: -9119539092.057255
[2025-06-04 23:21:59] 2025-06-04 21:12:46,463 | INFO     | intersect: -9119539092.057255
[2025-06-04 23:21:59] 2025-06-04 21:12:46,463 | INFO     | chi2: 2.4360468222313276
[2025-06-04 23:21:59] 2025-06-04 21:12:46,463 | INFO     | sum of square deviations: 3822136780.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,466 | INFO     | sum of deviations: 36249387189.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,467 | INFO     | mean x: 1749064114.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,467 | INFO     | mean y: 2470280.5064935065
[2025-06-04 23:21:59] 2025-06-04 21:12:46,467 | INFO     | -- intersect: -16585764504.427404
[2025-06-04 23:21:59] 2025-06-04 21:12:46,467 | INFO     | intersect: -16585764504.427404
[2025-06-04 23:21:59] 2025-06-04 21:12:46,468 | INFO     | chi2: 1.6616119264099325
[2025-06-04 23:21:59] 2025-06-04 21:12:46,468 | INFO     | current chi2=1.6616119264099325 (change=31.790640834729185 %)
[2025-06-04 23:21:59] 2025-06-04 21:12:46,468 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 23:21:59] 2025-06-04 21:12:46,473 | INFO     | sum of deviations: 35416335565.00003
[2025-06-04 23:21:59] 2025-06-04 21:12:46,473 | INFO     | mean x: 1749063961.5
[2025-06-04 23:21:59] 2025-06-04 21:12:46,474 | INFO     | mean y: 2469757.3008849556
[2025-06-04 23:21:59] 2025-06-04 21:12:46,474 | INFO     | -- intersect: -17304222726.352695
[2025-06-04 23:21:59] 2025-06-04 21:12:46,474 | INFO     | intersect: -17304222726.352695
[2025-06-04 23:21:59] 2025-06-04 21:12:46,474 | INFO     | chi2: 1.6624019647028039
[2025-06-04 23:21:59] 2025-06-04 21:12:46,474 | INFO     | current chi2=1.6624019647028039 (change=-0.04754649869288903 %)
[2025-06-04 23:21:59] 2025-06-04 21:12:46,474 | INFO     | right removable region: 225
[2025-06-04 23:21:59] 2025-06-04 21:12:46,475 | INFO     | sum of square deviations: 3822136780.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,477 | INFO     | sum of deviations: -20613025694.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,477 | INFO     | mean x: 1749064419.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,477 | INFO     | mean y: 2486434.2467532465
[2025-06-04 23:21:59] 2025-06-04 21:12:46,477 | INFO     | -- intersect: 9435301606.630035
[2025-06-04 23:21:59] 2025-06-04 21:12:46,477 | INFO     | intersect: 9435301606.630035
[2025-06-04 23:21:59] 2025-06-04 21:12:46,478 | INFO     | chi2: 0.8615858211961696
[2025-06-04 23:21:59] 2025-06-04 21:12:46,478 | INFO     | current chi2=0.8615858211961696 (change=64.63180373491389 %)
[2025-06-04 23:21:59] 2025-06-04 21:12:46,478 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 23:21:59] 2025-06-04 21:12:46,480 | INFO     | sum of deviations: -27108227979.999996
[2025-06-04 23:21:59] 2025-06-04 21:12:46,480 | INFO     | mean x: 1749064571.5
[2025-06-04 23:21:59] 2025-06-04 21:12:46,480 | INFO     | mean y: 2490480.4159292034
[2025-06-04 23:21:59] 2025-06-04 21:12:46,480 | INFO     | -- intersect: 13249313494.804457
[2025-06-04 23:21:59] 2025-06-04 21:12:46,481 | INFO     | intersect: 13249313494.804457
[2025-06-04 23:21:59] 2025-06-04 21:12:46,481 | INFO     | chi2: 0.8110803852605535
[2025-06-04 23:21:59] 2025-06-04 21:12:46,481 | INFO     | current chi2=0.8110803852605535 (change=5.861915864109465 %)
[2025-06-04 23:21:59] 2025-06-04 21:12:46,481 | INFO     | left removable region: 20
[2025-06-04 23:21:59] 2025-06-04 21:12:46,482 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,485 | INFO     | sum of deviations: -10350020304.000002
[2025-06-04 23:21:59] 2025-06-04 21:12:46,486 | INFO     | mean x: 1749064541.0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,486 | INFO     | mean y: 2499720.7853658535
[2025-06-04 23:21:59] 2025-06-04 21:12:46,486 | INFO     | -- intersect: 6779185742.356157
[2025-06-04 23:21:59] 2025-06-04 21:12:46,486 | INFO     | intersect: 6779185742.356157
[2025-06-04 23:21:59] 2025-06-04 21:12:46,486 | INFO     | chi2: 0.01648325699379194
[2025-06-04 23:21:59] 2025-06-04 21:12:46,486 | INFO     | -- intersect: 6779185742.356157
[2025-06-04 23:21:59] 2025-06-04 21:12:46,486 | INFO     | current memory leak: -3.87 B/s (using 205 data points, chi2=0.02)
[2025-06-04 23:21:59] 2025-06-04 21:12:46,487 | INFO     | ..............................
[2025-06-04 23:21:59] 2025-06-04 21:12:46,487 | INFO     | . Timing measurements:
[2025-06-04 23:21:59] 2025-06-04 21:12:46,488 | INFO     | . get job = 0 s
[2025-06-04 23:21:59] 2025-06-04 21:12:46,488 | INFO     | . initial setup = 2 s
[2025-06-04 23:21:59] 2025-06-04 21:12:46,488 | INFO     | . payload setup = 13 s
[2025-06-04 23:21:59] 2025-06-04 21:12:46,488 | INFO     | . stage-in = 0 s
[2025-06-04 23:21:59] 2025-06-04 21:12:46,488 | INFO     | . payload execution = 14390 s
[2025-06-04 23:21:59] 2025-06-04 21:12:46,488 | INFO     | . stage-out = 8 s
[2025-06-04 23:21:59] 2025-06-04 21:12:46,488 | INFO     | . log creation = 1 s
[2025-06-04 23:21:59] 2025-06-04 21:12:46,488 | INFO     | ..............................
[2025-06-04 23:21:59] 2025-06-04 21:12:46,633 | INFO     | 
[2025-06-04 23:21:59] 2025-06-04 21:12:46,634 | INFO     | job summary report
[2025-06-04 23:21:59] 2025-06-04 21:12:46,634 | INFO     | --------------------------------------------------
[2025-06-04 23:21:59] 2025-06-04 21:12:46,634 | INFO     | PanDA job id: 6678364684
[2025-06-04 23:21:59] 2025-06-04 21:12:46,634 | INFO     | task id: 45006595
[2025-06-04 23:21:59] 2025-06-04 21:12:46,634 | INFO     | errors: (none)
[2025-06-04 23:21:59] 2025-06-04 21:12:46,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:21:59] 2025-06-04 21:12:46,634 | INFO     | pilot state: finished 
[2025-06-04 23:21:59] 2025-06-04 21:12:46,634 | INFO     | transexitcode: 0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | exeerrorcode: 0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | exeerrordiag: 
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | exitcode: 0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | exitmsg: OK
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | cpuconsumptiontime: 53640 s
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | nevents: 400
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | neventsw: 0
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | pid: 6709
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | pgrp: 6709
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | corecount: 8
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | event service: False
[2025-06-04 23:21:59] 2025-06-04 21:12:46,635 | INFO     | sizes: {0: 2397171, 1: 2397370, 11: 2397576, 12: 2397604, 14408: 2427586, 14417: 2436711, 14507: 2436825}
[2025-06-04 23:21:59] 2025-06-04 21:12:46,636 | INFO     | --------------------------------------------------
[2025-06-04 23:21:59] 2025-06-04 21:12:46,636 | INFO     | 
[2025-06-04 23:21:59] 2025-06-04 21:12:46,636 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-04 23:21:59] 2025-06-04 21:12:47,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:21:59] 2025-06-04 21:12:47,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:21:59] 2025-06-04 21:12:47,188 | INFO     | job 6678364684 has completed (purged errors)
[2025-06-04 23:21:59] 2025-06-04 21:12:47,188 | INFO     | overall cleanup function is called
[2025-06-04 23:21:59] 2025-06-04 21:12:48,197 | INFO     | --- collectZombieJob: --- 10, [6709]
[2025-06-04 23:21:59] 2025-06-04 21:12:48,198 | INFO     | zombie collector waiting for pid 6709
[2025-06-04 23:21:59] 2025-06-04 21:12:48,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:21:59] 2025-06-04 21:12:48,198 | INFO     | collected zombie processes
[2025-06-04 23:21:59] 2025-06-04 21:12:48,198 | INFO     | will attempt to kill all subprocesses of pid=6709
[2025-06-04 23:21:59] 2025-06-04 21:12:48,300 | INFO     | process IDs to be killed: [6709] (in reverse order)
[2025-06-04 23:21:59] 2025-06-04 21:12:49,058 | INFO     | PID=30565 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 23:21:59] 2025-06-04 21:12:49,059 | INFO     | .. there are 9 such processes running
[2025-06-04 23:21:59] 2025-06-04 21:12:49,093 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:21:59] 2025-06-04 21:12:49,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:21:59] 2025-06-04 21:12:49,097 | INFO     | did not find any defunct processes belonging to 6709
[2025-06-04 23:21:59] 2025-06-04 21:12:49,103 | INFO     | did not find any defunct processes belonging to 6709
[2025-06-04 23:21:59] 2025-06-04 21:12:49,103 | INFO     | ready for new job
[2025-06-04 23:21:59] 2025-06-04 21:12:49,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:21:59] 2025-06-04 21:12:49,109 | INFO     | **************************************
[2025-06-04 23:21:59] 2025-06-04 21:12:49,109 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:21:59] 2025-06-04 21:12:49,109 | INFO     | **************************************
[2025-06-04 23:21:59] 2025-06-04 21:12:49,109 | INFO     | 
[2025-06-04 23:21:59] 2025-06-04 21:12:49,110 | INFO     | pilot is running in a VM
[2025-06-04 23:21:59] 2025-06-04 21:12:49,110 | INFO     | architecture information:
[2025-06-04 23:21:59] 2025-06-04 21:12:49,112 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:21:59] 2025-06-04 21:12:49,212 | INFO     | cat /etc/os-release:
[2025-06-04 23:21:59] NAME="CentOS Linux"
[2025-06-04 23:21:59] VERSION="7 (Core)"
[2025-06-04 23:21:59] ID="centos"
[2025-06-04 23:21:59] ID_LIKE="rhel fedora"
[2025-06-04 23:21:59] VERSION_ID="7"
[2025-06-04 23:21:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:21:59] ANSI_COLOR="0;31"
[2025-06-04 23:21:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:21:59] HOME_URL="https://www.centos.org/"
[2025-06-04 23:21:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:21:59] 
[2025-06-04 23:21:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:21:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:21:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:21:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:21:59] 
[2025-06-04 23:21:59] 2025-06-04 21:12:49,213 | INFO     | **************************************
[2025-06-04 23:21:59] 2025-06-04 21:12:49,717 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-04 23:21:59] 2025-06-04 21:12:49,936 | INFO     | sufficient remaining disk space (496995663872 B)
[2025-06-04 23:21:59] 2025-06-04 21:12:49,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:21:59] 2025-06-04 21:12:49,937 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:21:59] 2025-06-04 21:12:49,937 | INFO     | update_server=False
[2025-06-04 23:21:59] 2025-06-04 21:12:49,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:21:59] 2025-06-04 21:12:49,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:21:59] 2025-06-04 21:12:49,938 | INFO     | aborting loop
[2025-06-04 23:21:59] 2025-06-04 21:12:49,938 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:21:59] 2025-06-04 21:12:49,939 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:21:59] 2025-06-04 21:12:49,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:21:59] 2025-06-04 21:12:49,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:21:59] 2025-06-04 21:12:49,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:21:59] 2025-06-04 21:12:49,999 | INFO     | all job control threads have been joined
[2025-06-04 23:21:59] 2025-06-04 21:12:50,772 | INFO     | all data control threads have been joined
[2025-06-04 23:21:59] 2025-06-04 21:12:50,944 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:50,944 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:50,990 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:50,994 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:51,006 | INFO     | [job] control thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:51,134 | INFO     | all payload control threads have been joined
[2025-06-04 23:21:59] 2025-06-04 21:12:51,387 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:51,648 | INFO     | [job] validate thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:51,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:21:59] 2025-06-04 21:12:51,717 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:51,779 | INFO     | [data] control thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:51,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:51,946 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:52,140 | INFO     | [payload] control thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:52,270 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:52,504 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:52,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:21:59] 2025-06-04 21:12:52,658 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:56,660 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:21:59] 2025-06-04 21:12:57,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748126951232)>', '<ExcThread(monitor, started 139747666147072)>']
[2025-06-04 23:21:59] 2025-06-04 21:12:57,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:21:59] 2025-06-04 21:12:57,988 | INFO     | [monitor] control thread has ended
[2025-06-04 23:21:59] 2025-06-04 21:13:02,707 | INFO     | all workflow threads have been joined
[2025-06-04 23:21:59] 2025-06-04 21:13:02,708 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:21:59] 2025-06-04 21:13:02,708 | INFO     | traces error code: 0
[2025-06-04 23:21:59] 2025-06-04 21:13:02,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:21:59] 2025-06-04 21:13:02,986 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:21:59] 2025-06-04 21:13:03,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:21:59] 2025-06-04 21:13:03,101 [wrapper] pilotpid: 30565
[2025-06-04 23:21:59] 2025-06-04 21:13:03,150 [wrapper] Pilot exit status: 0
[2025-06-04 23:21:59] 2025-06-04 21:13:03,612 [wrapper] pandaids: 6678364684
[2025-06-04 23:21:59] 2025-06-04 21:13:04,529 [wrapper] cleanup supervisor_pilot 32745 30566
[2025-06-04 23:21:59] 2025-06-04 21:13:04,700 [wrapper] Test setup, not cleaning
[2025-06-04 23:21:59] 2025-06-04 21:13:04,853 [wrapper] apfmon messages muted
[2025-06-04 23:21:59] 2025-06-04 21:13:04,914 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:21:59] 2025-06-04 21:13:05,014 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:21:59]  *** Error codes and diagnostics ***
[2025-06-04 23:21:59]     "exeErrorCode": 0,
[2025-06-04 23:21:59]     "exeErrorDiag": "",
[2025-06-04 23:21:59]     "pilotErrorCode": 0,
[2025-06-04 23:21:59]     "pilotErrorDiag": "",
[2025-06-04 23:21:59]  *** Listing of results directory ***
[2025-06-04 23:21:59] total 394280
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc      5111 Jun  4 08:29 queuedata.json
[2025-06-04 23:21:59] -rwx------. 1 boinc boinc     37140 Jun  4 08:30 runpilot2-wrapper.sh
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:21:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:44 run_atlas
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:44 job.xml
[2025-06-04 23:21:59] -rw-r--r--. 2 boinc boinc 213299160 Jun  4 18:44 EVNT.45006593._002168.pool.root.1
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc      6392 Jun  4 18:44 init_data.xml
[2025-06-04 23:21:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:44 start_atlas.sh
[2025-06-04 23:21:59] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:44 shared
[2025-06-04 23:21:59] -rw-r--r--. 2 boinc boinc    508879 Jun  4 18:44 input.tar.gz
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:44 boinc_lockfile
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc      2525 Jun  4 19:10 pandaJob.out
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc    990984 Jun  4 19:10 agis_schedconf.cvmfs.json
[2025-06-04 23:21:59] drwx------. 4 boinc boinc      4096 Jun  4 19:10 pilot3
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc 183344975 Jun  4 23:10 HITS.45006595._054168.pool.root.1
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc       531 Jun  4 23:10 boinc_task_state.xml
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc      1017 Jun  4 23:11 memory_monitor_summary.json
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc   1598969 Jun  4 23:11 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc    386100 Jun  4 23:11 log.45006595._054168.job.log.tgz.1
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc        95 Jun  4 23:12 pilot_heartbeat.json
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc      7688 Jun  4 23:12 heartbeat.json
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc      4539 Jun  4 23:13 pilotlog.txt
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc   1253842 Jun  4 23:13 log.45006595._054168.job.log.1
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc       357 Jun  4 23:13 output.list
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc       620 Jun  4 23:13 runtime_log
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc   1658880 Jun  4 23:13 result.tar.gz
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc      8659 Jun  4 23:13 runtime_log.err
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc       657 Jun  4 23:13 kn2LDmxowg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiVnKDmnamNOo.diag
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc      8192 Jun  4 23:21 boinc_mmap_file
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc        28 Jun  4 23:21 wrapper_checkpoint.txt
[2025-06-04 23:21:59] -rw-r--r--. 1 boinc boinc     20564 Jun  4 23:21 stderr.txt
[2025-06-04 23:21:59] HITS file was successfully produced:
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc 183344975 Jun  4 23:10 shared/HITS.pool.root.1
[2025-06-04 23:21:59]  *** Contents of shared directory: ***
[2025-06-04 23:21:59] total 389484
[2025-06-04 23:21:59] -rw-r--r--. 2 boinc boinc 213299160 Jun  4 18:44 ATLAS.root_0
[2025-06-04 23:21:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:44 start_atlas.sh
[2025-06-04 23:21:59] -rw-r--r--. 2 boinc boinc    508879 Jun  4 18:44 input.tar.gz
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc 183344975 Jun  4 23:10 HITS.pool.root.1
[2025-06-04 23:21:59] -rw-------. 1 boinc boinc   1658880 Jun  4 23:13 result.tar.gz
23:22:01 (14240): run_atlas exited; CPU time 53831.892374
23:22:01 (14240): called boinc_finish(0)

</stderr_txt>
]]>

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