Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:52:16 (49701): wrapper (7.7.26015): starting
01:52:16 (49701): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 01:52:16] Arguments: --nthreads 12
[2025-06-04 01:52:16] Threads: 12
[2025-06-04 01:52:16] Checking for CVMFS
[2025-06-04 01:52:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:52:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:52:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:52:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:52:18] 2.11.5.0 2212478 32951 338156 146773 1 264 39079410 45568000 15976 130560 0 337252853 99.801 203801735 15903 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 01:52:18] CVMFS is ok
[2025-06-04 01:52:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:52:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:52:18] Further information can be found at the LHC@home message board.
[2025-06-04 01:52:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:52:18] Checking for apptainer binary...
[2025-06-04 01:52:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:52:18] Running /usr/bin/apptainer --version
[2025-06-04 01:52:18] apptainer version 1.4.0-1.el9
[2025-06-04 01:52:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:52:19] wns0133.triumf.lcg
[2025-06-04 01:52:19] apptainer works
[2025-06-04 01:52:19] Set ATHENA_PROC_NUMBER=12
[2025-06-04 01:52:19] Set ATHENA_CORE_NUMBER=12
[2025-06-04 01:52:19] Starting ATLAS job with PandaID=6678364502
[2025-06-04 01:52:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:58:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678364502/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | INFO     | extracted standard info from prmon json
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | WARNING  | wrong length of table data, x=[1749027304.0], y=[2477.0] (must be same and length>=4)
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | INFO     | ..............................
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | INFO     | . Timing measurements:
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . get job = 0 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . initial setup = 7 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . payload setup = 36 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . stage-in = 0 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . payload execution = 79 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . stage-out = 1 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . log creation = 0 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | ..............................
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678364502/pilotlog.txt
[2025-06-04 01:58:42] 2025-06-04 08:58:29,050 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 01:58:42] - Log from pilotlog.txt -
[2025-06-04 01:58:42] 2025-06-04 08:58:28,879 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678364502/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | INFO     | extracted standard info from prmon json
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | WARNING  | wrong length of table data, x=[1749027304.0], y=[2477.0] (must be same and length>=4)
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | INFO     | ..............................
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | INFO     | . Timing measurements:
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . get job = 0 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . initial setup = 7 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . payload setup = 36 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . stage-in = 0 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . payload execution = 79 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . stage-out = 1 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . log creation = 0 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | ..............................
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678364502/pilotlog.txt
[2025-06-04 01:58:42] 2025-06-04 08:58:29,050 | WARNING  | 
[2025-06-04 01:58:42] [begin log extracts]
[2025-06-04 01:58:42] - Log from pilotlog.txt -
[2025-06-04 01:58:42] 2025-06-04 08:58:28,879 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678364502/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | INFO     | extracted standard info from prmon json
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:58:42] 2025-06-04 08:58:28,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | WARNING  | wrong length of table data, x=[1749027304.0], y=[2477.0] (must be same and length>=4)
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | INFO     | ..............................
[2025-06-04 01:58:42] 2025-06-04 08:58:28,881 | INFO     | . Timing measurements:
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . get job = 0 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . initial setup = 7 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . payload setup = 36 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . stage-in = 0 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . payload execution = 79 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . stage-out = 1 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | . log creation = 0 s
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | ..............................
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 01:58:42] 2025-06-04 08:58:28,882 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678364502/pilotlog.txt
[2025-06-04 01:58:42] [end log extracts]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,050 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 01:58:42] 2025-06-04 08:58:29,051 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 01:58:42] 2025-06-04 08:58:29,288 | INFO     | 
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | job summary report
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | --------------------------------------------------
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | PanDA job id: 6678364502
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | task id: 45006595
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 01:55:46,505 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | pilot state: failed 
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | transexitcode: 65
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | exeerrorcode: 65
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | exitcode: 65
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | cpuconsumptiontime: 18 s
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | nevents: 0
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | neventsw: 0
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | pid: 59671
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | pgrp: 59671
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | corecount: 12
[2025-06-04 01:58:42] 2025-06-04 08:58:29,289 | INFO     | event service: False
[2025-06-04 01:58:42] 2025-06-04 08:58:29,290 | INFO     | sizes: {0: 2405010, 1: 2405209, 2: 2405209, 12: 2405237, 23: 2405265, 31: 2405499, 34: 2405655, 120: 2428862, 124: 2433097, 126: 2433125, 269: 2433267}
[2025-06-04 01:58:42] 2025-06-04 08:58:29,290 | INFO     | --------------------------------------------------
[2025-06-04 01:58:42] 2025-06-04 08:58:29,290 | INFO     | 
[2025-06-04 01:58:42] 2025-06-04 08:58:29,290 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | job 6678364502 has completed (purged errors)
[2025-06-04 01:58:42] 2025-06-04 08:58:29,430 | INFO     | overall cleanup function is called
[2025-06-04 01:58:42] 2025-06-04 08:58:30,435 | INFO     | --- collectZombieJob: --- 10, [59671]
[2025-06-04 01:58:42] 2025-06-04 08:58:30,436 | INFO     | zombie collector waiting for pid 59671
[2025-06-04 01:58:42] 2025-06-04 08:58:30,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:58:42] 2025-06-04 08:58:30,436 | INFO     | collected zombie processes
[2025-06-04 01:58:42] 2025-06-04 08:58:30,436 | INFO     | will attempt to kill all subprocesses of pid=59671
[2025-06-04 01:58:42] 2025-06-04 08:58:30,733 | INFO     | process IDs to be killed: [59671] (in reverse order)
[2025-06-04 01:58:42] 2025-06-04 08:58:31,093 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:58:42] 2025-06-04 08:58:31,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:58:42] 2025-06-04 08:58:31,110 | INFO     | did not find any defunct processes belonging to 59671
[2025-06-04 01:58:42] 2025-06-04 08:58:31,127 | INFO     | did not find any defunct processes belonging to 59671
[2025-06-04 01:58:42] 2025-06-04 08:58:31,127 | INFO     | ready for new job
[2025-06-04 01:58:42] 2025-06-04 08:58:31,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:58:42] 2025-06-04 08:58:31,132 | INFO     | **************************************
[2025-06-04 01:58:42] 2025-06-04 08:58:31,133 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:58:42] 2025-06-04 08:58:31,133 | INFO     | **************************************
[2025-06-04 01:58:42] 2025-06-04 08:58:31,133 | INFO     | 
[2025-06-04 01:58:42] 2025-06-04 08:58:31,135 | INFO     | architecture information:
[2025-06-04 01:58:42] 2025-06-04 08:58:31,143 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:58:42] 2025-06-04 08:58:31,210 | INFO     | cat /etc/os-release:
[2025-06-04 01:58:42] NAME="CentOS Linux"
[2025-06-04 01:58:42] VERSION="7 (Core)"
[2025-06-04 01:58:42] ID="centos"
[2025-06-04 01:58:42] ID_LIKE="rhel fedora"
[2025-06-04 01:58:42] VERSION_ID="7"
[2025-06-04 01:58:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:58:42] ANSI_COLOR="0;31"
[2025-06-04 01:58:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:58:42] HOME_URL="https://www.centos.org/"
[2025-06-04 01:58:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:58:42] 
[2025-06-04 01:58:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:58:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:58:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:58:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:58:42] 
[2025-06-04 01:58:42] 2025-06-04 08:58:31,211 | INFO     | **************************************
[2025-06-04 01:58:42] 2025-06-04 08:58:31,715 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 01:58:42] 2025-06-04 08:58:31,734 | INFO     | sufficient remaining disk space (1915545976832 B)
[2025-06-04 01:58:42] 2025-06-04 08:58:31,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:58:42] 2025-06-04 08:58:31,734 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:58:42] 2025-06-04 08:58:31,734 | INFO     | update_server=False
[2025-06-04 01:58:42] 2025-06-04 08:58:31,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:58:42] 2025-06-04 08:58:31,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:58:42] 2025-06-04 08:58:31,736 | INFO     | aborting loop
[2025-06-04 01:58:42] 2025-06-04 08:58:31,739 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:58:42] 2025-06-04 08:58:31,740 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:58:42] 2025-06-04 08:58:31,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:58:42] 2025-06-04 08:58:31,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:58:42] 2025-06-04 08:58:31,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:58:42] 2025-06-04 08:58:32,005 | INFO     | all job control threads have been joined
[2025-06-04 01:58:42] 2025-06-04 08:58:32,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:58:42] 2025-06-04 08:58:32,710 | INFO     | all data control threads have been joined
[2025-06-04 01:58:42] 2025-06-04 08:58:32,740 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:32,749 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:32,799 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:32,826 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:32,858 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:32,893 | INFO     | all payload control threads have been joined
[2025-06-04 01:58:42] 2025-06-04 08:58:33,011 | INFO     | [job] control thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:33,257 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:33,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:33,592 | INFO     | [job] validate thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:33,593 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:33,716 | INFO     | [data] control thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:33,899 | INFO     | [payload] control thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:34,074 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:34,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:58:42] 2025-06-04 08:58:34,374 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:35,310 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:35,758 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:58:42] 2025-06-04 08:58:36,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578831345472)>', '<ExcThread(monitor, started 140578129946368)>']
[2025-06-04 01:58:42] 2025-06-04 08:58:37,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:58:42] 2025-06-04 08:58:37,777 | INFO     | [monitor] control thread has ended
[2025-06-04 01:58:42] 2025-06-04 08:58:41,967 | INFO     | all workflow threads have been joined
[2025-06-04 01:58:42] 2025-06-04 08:58:41,968 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:58:42] 2025-06-04 08:58:41,968 | INFO     | traces error code: 0
[2025-06-04 01:58:42] 2025-06-04 08:58:41,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:58:42] 2025-06-04 08:58:42,122 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:58:42] 2025-06-04 08:58:42,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:58:42] 2025-06-04 08:58:42,133 [wrapper] pilotpid: 53287
[2025-06-04 01:58:42] 2025-06-04 08:58:42,143 [wrapper] Pilot exit status: 0
[2025-06-04 01:58:42] 2025-06-04 08:58:42,200 [wrapper] pandaids: 6678364502
[2025-06-04 01:58:42] 2025-06-04 08:58:42,255 [wrapper] cleanup supervisor_pilot   53293 53288
[2025-06-04 01:58:42] 2025-06-04 08:58:42,267 [wrapper] Test setup, not cleaning
[2025-06-04 01:58:42] 2025-06-04 08:58:42,269 [wrapper] apfmon messages muted
[2025-06-04 01:58:42] 2025-06-04 08:58:42,283 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:58:42] 2025-06-04 08:58:42,324 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:58:42]  *** Error codes and diagnostics ***
[2025-06-04 01:58:42]     "exeErrorCode": 65,
[2025-06-04 01:58:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 01:58:42]     "pilotErrorCode": 1305,
[2025-06-04 01:58:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 01:58:42]  *** Listing of results directory ***
[2025-06-04 01:58:42] total 214688
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:59 pilot3.tar.gz
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc      5111 Jun  3 23:24 queuedata.json
[2025-06-04 01:58:42] -rwx------. 1 boinc boinc     37140 Jun  3 23:25 runpilot2-wrapper.sh
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc       100 Jun  4 01:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:58:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 01:52 run_atlas
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc       105 Jun  4 01:52 job.xml
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc      6602 Jun  4 01:52 init_data.xml
[2025-06-04 01:58:42] -rw-r--r--. 2 boinc boinc 215793890 Jun  4 01:52 EVNT.45006593._002161.pool.root.1
[2025-06-04 01:58:42] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:52 start_atlas.sh
[2025-06-04 01:58:42] drwxrwx--x. 2 boinc boinc      4096 Jun  4 01:52 shared
[2025-06-04 01:58:42] -rw-r--r--. 2 boinc boinc    508884 Jun  4 01:52 input.tar.gz
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc         0 Jun  4 01:52 boinc_lockfile
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc      2525 Jun  4 01:52 pandaJob.out
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc    986774 Jun  4 01:53 agis_schedconf.cvmfs.json
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc   1603667 Jun  4 01:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:58:42] drwx------. 4 boinc boinc      4096 Jun  4 01:53 pilot3
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc       523 Jun  4 01:55 boinc_task_state.xml
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc       954 Jun  4 01:55 memory_monitor_summary.json
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc     21690 Jun  4 01:56 log.45006595._054002.job.log.tgz.1
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc        95 Jun  4 01:58 pilot_heartbeat.json
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc      8327 Jun  4 01:58 heartbeat.json
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc      8192 Jun  4 01:58 boinc_mmap_file
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc        22 Jun  4 01:58 wrapper_checkpoint.txt
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc      4475 Jun  4 01:58 pilotlog.txt
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc     82562 Jun  4 01:58 log.45006595._054002.job.log.1
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc       188 Jun  4 01:58 output.list
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc       620 Jun  4 01:58 runtime_log
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc    122880 Jun  4 01:58 result.tar.gz
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc       644 Jun  4 01:58 YT0MDmujwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjTnKDm1zuBIo.diag
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc      8484 Jun  4 01:58 runtime_log.err
[2025-06-04 01:58:42] -rw-r--r--. 1 boinc boinc     21708 Jun  4 01:58 stderr.txt
[2025-06-04 01:58:42] No HITS result produced
[2025-06-04 01:58:42]  *** Contents of shared directory: ***
[2025-06-04 01:58:42] total 211380
[2025-06-04 01:58:42] -rw-r--r--. 2 boinc boinc 215793890 Jun  4 01:52 ATLAS.root_0
[2025-06-04 01:58:42] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:52 start_atlas.sh
[2025-06-04 01:58:42] -rw-r--r--. 2 boinc boinc    508884 Jun  4 01:52 input.tar.gz
[2025-06-04 01:58:42] -rw-------. 1 boinc boinc    122880 Jun  4 01:58 result.tar.gz
01:58:44 (49701): run_atlas exited; CPU time 30.771587
01:58:44 (49701): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN