Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
19:05:35 (18057): wrapper (7.7.26015): starting
19:05:35 (18057): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:05:35] Arguments: --nthreads 8
[2025-06-04 19:05:35] Threads: 8
[2025-06-04 19:05:35] Checking for CVMFS
[2025-06-04 19:05:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:05:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:05:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:05:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:05:38] 2.11.2.0 31038 33651 102688 146788 2 101 20781542 25165824 4296 130560 0 18319547 99.828 19202706 2527 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 19:05:38] CVMFS is ok
[2025-06-04 19:05:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:05:38] Checking for apptainer binary...
[2025-06-04 19:05:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:05:38] Running /usr/bin/apptainer --version
[2025-06-04 19:05:38] apptainer version 1.3.2-1.el7
[2025-06-04 19:05:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:05:52] cg-vwn486.simple-grid.lan
[2025-06-04 19:05:52] apptainer works
[2025-06-04 19:05:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:05:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:05:52] Starting ATLAS job with PandaID=6678364440
[2025-06-04 19:05:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:41:16] Job failed
[2025-06-04 22:41:16] ++ pwd
[2025-06-04 22:41:16] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/slots/15/
[2025-06-04 22:41:16] + RUNTIME_CONFIG_DIR=/var/lib/boinc/slots/15/
[2025-06-04 22:41:16] + mv ATLAS.root_0 EVNT.45006593._002159.pool.root.1
[2025-06-04 22:41:16] + tar --strip-components=5 -xvf input.tar.gz
[2025-06-04 22:41:16] + umask 077
[2025-06-04 22:41:16] ++ date +%s
[2025-06-04 22:41:16] + ACCOUNTING_STARTTIME=1749056758
[2025-06-04 22:41:16] + echo 'Detecting resource accounting method available for the job.'
[2025-06-04 22:41:16] Detecting resource accounting method available for the job.
[2025-06-04 22:41:16] + JOB_ACCOUNTING=
[2025-06-04 22:41:16] + command -v arc-job-cgroup
[2025-06-04 22:41:16] + '[' -z '' ']'
[2025-06-04 22:41:16] + GNU_TIME=/usr/bin/time
[2025-06-04 22:41:16] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-06-04 22:41:16] Looking for /usr/bin/time tool for accounting measurements
[2025-06-04 22:41:16] + '[' '!' -z /usr/bin/time ']'
[2025-06-04 22:41:16] + /usr/bin/time --version
[2025-06-04 22:41:16] + echo 'GNU time found and will be used for job accounting.'
[2025-06-04 22:41:16] GNU time found and will be used for job accounting.
[2025-06-04 22:41:16] + JOB_ACCOUNTING=gnutime
[2025-06-04 22:41:16] + '[' -z gnutime ']'
[2025-06-04 22:41:16] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-04 22:41:16] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-04 22:41:16] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-06-04/BOINC_MCORE/6678364440.out
[2025-06-04 22:41:16] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-06-04/BOINC_MCORE/6678364440.out
[2025-06-04 22:41:16] + export PILOT_NOKILL=YES
[2025-06-04 22:41:16] + PILOT_NOKILL=YES
[2025-06-04 22:41:16] + export GRID_GLOBAL_JOBID=df9NDmtjwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SnKDmKnscAo
[2025-06-04 22:41:16] + GRID_GLOBAL_JOBID=df9NDmtjwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SnKDmKnscAo
[2025-06-04 22:41:16] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/df9NDmtjwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SnKDmKnscAo
[2025-06-04 22:41:16] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/df9NDmtjwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SnKDmKnscAo
[2025-06-04 22:41:16] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-04 22:41:16] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-04 22:41:16] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-04 22:41:16] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-04 22:41:16] ++ pwd
[2025-06-04 22:41:16] + RUNTIME_JOB_DIR=/var/lib/boinc/slots/15
[2025-06-04 22:41:16] + RUNTIME_JOB_STDIN=/dev/null
[2025-06-04 22:41:16] ++ pwd
[2025-06-04 22:41:16] + RUNTIME_JOB_STDOUT=/var/lib/boinc/slots/15/log.45006595._053940.job.log.1
[2025-06-04 22:41:16] ++ pwd
[2025-06-04 22:41:16] + RUNTIME_JOB_STDERR=/var/lib/boinc/slots/15/log.45006595._053940.job.log.1
[2025-06-04 22:41:16] ++ pwd
[2025-06-04 22:41:16] + RUNTIME_JOB_DIAG=/var/lib/boinc/slots/15.diag
[2025-06-04 22:41:16] + '[' '!' -z '' ']'
[2025-06-04 22:41:16] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-06-04 22:41:16] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-06-04 22:41:16] + RUNTIME_FRONTEND_SEES_NODE=
[2025-06-04 22:41:16] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-06-04 22:41:16] + '[' '!' -z '' ']'
[2025-06-04 22:41:16] + '[' -z yes ']'
[2025-06-04 22:41:16] ++ pwd
[2025-06-04 22:41:16] + RUNTIME_JOB_DIAG=/var/lib/boinc/slots/15/df9NDmtjwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SnKDmKnscAo.diag
[2025-06-04 22:41:16] + runtimeenvironments=
[2025-06-04 22:41:16] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-04 22:41:16] + RTE_function_0 1
[2025-06-04 22:41:16] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 22:41:16] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 22:41:16] + export BOINC_APP=ATLAS
[2025-06-04 22:41:16] + BOINC_APP=ATLAS
[2025-06-04 22:41:16] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 22:41:16] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 22:41:16] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 22:41:16] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 22:41:16] + '[' -z 1 ']'
[2025-06-04 22:41:16] + '[' 1 == 1 ']'
[2025-06-04 22:41:16] + shift
[2025-06-04 22:41:16] + export ATLAS_LOCAL_AREA=/var/lib/boinc/slots/15/
[2025-06-04 22:41:16] + ATLAS_LOCAL_AREA=/var/lib/boinc/slots/15/
[2025-06-04 22:41:16] + '[' 0 -ne 0 ']'
[2025-06-04 22:41:16] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-06-04 22:41:16] + '[' -f /etc/os-release ']'
[2025-06-04 22:41:16] +++ cat /etc/os-release
[2025-06-04 22:41:16] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-06-04 22:41:16] +++ NAME='CentOS Linux'
[2025-06-04 22:41:16] +++ VERSION='7 (Core)'
[2025-06-04 22:41:16] +++ ID=centos
[2025-06-04 22:41:16] +++ ID_LIKE='rhel fedora'
[2025-06-04 22:41:16] +++ VERSION_ID=7
[2025-06-04 22:41:16] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-06-04 22:41:16] +++ ANSI_COLOR='0;31'
[2025-06-04 22:41:16] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-06-04 22:41:16] +++ HOME_URL=https://www.centos.org/
[2025-06-04 22:41:16] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-06-04 22:41:16] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-06-04 22:41:16] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-06-04 22:41:16] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-06-04 22:41:16] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-06-04 22:41:16] ++ echo 'CentOS Linux 7 (Core)'
[2025-06-04 22:41:16] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-06-04 22:41:16] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-06-04 22:41:16] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-06-04 22:41:16] + HOME=/var/lib/boinc/slots/15
[2025-06-04 22:41:16] + export HOME
[2025-06-04 22:41:16] + cd /var/lib/boinc/slots/15
[2025-06-04 22:41:16] + '[' '!' -z '' ']'
[2025-06-04 22:41:16] + '[' -z '' ']'
[2025-06-04 22:41:16] ++ /bin/hostname -f
[2025-06-04 22:41:16] + nodename=cg-vwn486.simple-grid.lan
[2025-06-04 22:41:16] + echo nodename=cg-vwn486.simple-grid.lan
[2025-06-04 22:41:16] + echo Processors=2
[2025-06-04 22:41:16] + echo Nodecount=1
[2025-06-04 22:41:16] + echo Benchmark=HEPSPEC:1.0
[2025-06-04 22:41:16] + executable=./runpilot2-wrapper.sh
[2025-06-04 22:41:16] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-06-04 22:41:16] ++ tr -d '\0'
[2025-06-04 22:41:16] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-06-04 22:41:16] ++ head -n 1
[2025-06-04 22:41:16] + line1='#!/bin/bash'
[2025-06-04 22:41:16] ++ echo '#!/bin/bash'
[2025-06-04 22:41:16] ++ sed -n 's/^#! *//p'
[2025-06-04 22:41:16] + shebang=/bin/bash
[2025-06-04 22:41:16] ++ echo /bin/bash
[2025-06-04 22:41:16] ++ awk '{print $1}'
[2025-06-04 22:41:16] + interpreter=/bin/bash
[2025-06-04 22:41:16] + '[' /bin/bash = /usr/bin/env ']'
[2025-06-04 22:41:16] + '[' x/bin/bash = x ']'
[2025-06-04 22:41:16] + type /bin/bash
[2025-06-04 22:41:16] + '[' xgnutime = xgnutime ']'
[2025-06-04 22:41:16] + /usr/bin/time -o /var/lib/boinc/slots/15/df9NDmtjwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SnKDmKnscAo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-06-04 22:41:16] + RESULT=1
[2025-06-04 22:41:16] + sed -i -e /nodename=/d /var/lib/boinc/slots/15/df9NDmtjwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SnKDmKnscAo.diag
[2025-06-04 22:41:16] ++ grep domain_name init_data.xml
[2025-06-04 22:41:16] ++ sed -e 's# #_#g'
[2025-06-04 22:41:16] ++ awk -F '>' '{print $2}'
[2025-06-04 22:41:16] ++ awk -F '<' '{print $1}'
[2025-06-04 22:41:16] + hostname=cg-vwn486
[2025-06-04 22:41:16] ++ awk -F '<' '{print $1}'
[2025-06-04 22:41:16] ++ awk -F '>' '{print $2}'
[2025-06-04 22:41:16] ++ sed -e 's# #_#g'
[2025-06-04 22:41:16] ++ grep user_name init_data.xml
[2025-06-04 22:41:16] + username=57compute
[2025-06-04 22:41:16] + nodename=57compute@cg-vwn486
[2025-06-04 22:41:16] + echo nodename=57compute@cg-vwn486
[2025-06-04 22:41:16] + '[' -n 8 ']'
[2025-06-04 22:41:16] + sed -i -e s/Processors=1/Processors=8/ /var/lib/boinc/slots/15/df9NDmtjwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SnKDmKnscAo.diag
[2025-06-04 22:41:16] + echo exitcode=1
[2025-06-04 22:41:16] + runtimeenvironments=
[2025-06-04 22:41:16] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-04 22:41:16] + RTE_function_0 2
[2025-06-04 22:41:16] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 22:41:16] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 22:41:16] + export BOINC_APP=ATLAS
[2025-06-04 22:41:16] + BOINC_APP=ATLAS
[2025-06-04 22:41:16] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 22:41:16] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 22:41:16] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 22:41:16] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 22:41:16] + '[' -z 2 ']'
[2025-06-04 22:41:16] + '[' 2 == 1 ']'
[2025-06-04 22:41:16] + '[' 0 -ne 0 ']'
[2025-06-04 22:41:16] + echo 'zip all output files'
[2025-06-04 22:41:16] + flist='*.diag '
[2025-06-04 22:41:16] + for f in ./heartbeat.json ./output.list ./log.45006595._053940.job.log.1 ./log.45006595._053940.job.log.1 ./gmlog/
[2025-06-04 22:41:16] + '[' -e ./heartbeat.json ']'
[2025-06-04 22:41:16] + flist='*.diag  ./heartbeat.json'
[2025-06-04 22:41:16] + for f in ./heartbeat.json ./output.list ./log.45006595._053940.job.log.1 ./log.45006595._053940.job.log.1 ./gmlog/
[2025-06-04 22:41:16] + '[' -e ./output.list ']'
[2025-06-04 22:41:16] + flist='*.diag  ./heartbeat.json ./output.list'
[2025-06-04 22:41:16] + for f in ./heartbeat.json ./output.list ./log.45006595._053940.job.log.1 ./log.45006595._053940.job.log.1 ./gmlog/
[2025-06-04 22:41:16] + '[' -e ./log.45006595._053940.job.log.1 ']'
[2025-06-04 22:41:16] + flist='*.diag  ./heartbeat.json ./output.list ./log.45006595._053940.job.log.1'
[2025-06-04 22:41:16] + for f in ./heartbeat.json ./output.list ./log.45006595._053940.job.log.1 ./log.45006595._053940.job.log.1 ./gmlog/
[2025-06-04 22:41:16] + '[' -e ./log.45006595._053940.job.log.1 ']'
[2025-06-04 22:41:16] + flist='*.diag  ./heartbeat.json ./output.list ./log.45006595._053940.job.log.1 ./log.45006595._053940.job.log.1'
[2025-06-04 22:41:16] + for f in ./heartbeat.json ./output.list ./log.45006595._053940.job.log.1 ./log.45006595._053940.job.log.1 ./gmlog/
[2025-06-04 22:41:16] + '[' -e ./gmlog/ ']'
[2025-06-04 22:41:16] + '[' -f output.list ']'
[2025-06-04 22:41:16] ++ awk '{print $1}' output.list
[2025-06-04 22:41:16] + ol=log.45006595._053940.job.log.tgz.1
[2025-06-04 22:41:16] + for i in '$ol'
[2025-06-04 22:41:16] + [[ -f log.45006595._053940.job.log.tgz.1 ]]
[2025-06-04 22:41:16] + [[ ! log.45006595._053940.job.log.tgz.1 =~ HITS.* ]]
[2025-06-04 22:41:16] + flist='*.diag  ./heartbeat.json ./output.list ./log.45006595._053940.job.log.1 ./log.45006595._053940.job.log.1 log.45006595._053940.job.log.tgz.1'
[2025-06-04 22:41:16] + sed -i -e 's/HITS.* /HITS.pool.root.1 /' output.list
[2025-06-04 22:41:16] + tar cvf result.tar.gz df9NDmtjwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SnKDmKnscAo.diag ./heartbeat.json ./output.list ./log.45006595._053940.job.log.1 ./log.45006595._053940.job.log.1 log.45006595._053940.job.log.tgz.1
[2025-06-04 22:41:16] + '[' xgnutime = xcgroup ']'
[2025-06-04 22:41:16] + '[' -n '' ']'
[2025-06-04 22:41:16] + '[' -n '' ']'
[2025-06-04 22:41:16] ++ date +%s
[2025-06-04 22:41:16] + ACCOUNTING_ENDTIME=1749068553
[2025-06-04 22:41:16] ++ date -d '1970-01-01 UTC 1749056758 seconds' +%Y%m%d%H%M%SZ
[2025-06-04 22:41:16] + echo LRMSStartTime=20250604190558Z
[2025-06-04 22:41:16] ++ date -d '1970-01-01 UTC 1749068553 seconds' +%Y%m%d%H%M%SZ
[2025-06-04 22:41:16] + echo LRMSEndTime=20250604222233Z
[2025-06-04 22:41:16] + echo walltime=11795
[2025-06-04 22:41:16] + echo exitcode=1
[2025-06-04 22:41:16] + exit 1
[2025-06-04 22:41:16] ./runtime_log
[2025-06-04 22:41:16] ./runtime_log.err
[2025-06-04 22:41:16] ./log.45006595._053940.job.log.1
[2025-06-04 22:41:16] ./pilot3/pilot/util/loggingsupport.py
[2025-06-04 22:41:16] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-06-04 22:41:16] ./pilot3/pilot/util/realtimelogger.py
[2025-06-04 22:41:16] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-06-04 22:41:16] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-06-04 22:41:16] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-06-04 22:41:16] ./pilotlog.txt
[2025-06-04 22:41:16] ./log.45006595._053940.job.log.tgz.1
23:14:31 (18057): run_atlas exited; CPU time 250.506035
23:14:31 (18057): app exit status: 0x1
23:14:31 (18057): called boinc_finish(195)

</stderr_txt>
]]>

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