Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:42:31 (11641): wrapper (7.7.26015): starting
04:42:31 (11641): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 04:42:31] Arguments: --nthreads 12
[2025-06-04 04:42:31] Threads: 12
[2025-06-04 04:42:31] Checking for CVMFS
[2025-06-04 04:42:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:42:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:42:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:42:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:42:31] 2.11.2.0 2925 35456 83512 146773 2 58 14389904 20275200 1 130560 0 15572203 99.986 6112178 7349 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 04:42:31] CVMFS is ok
[2025-06-04 04:42:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:42:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:42:31] Further information can be found at the LHC@home message board.
[2025-06-04 04:42:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:42:31] Checking for apptainer binary...
[2025-06-04 04:42:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:42:31] Running /usr/bin/apptainer --version
[2025-06-04 04:42:31] apptainer version 1.3.2-1.el7
[2025-06-04 04:42:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:42:33] c-205-10.aglt2.org
[2025-06-04 04:42:33] apptainer works
[2025-06-04 04:42:33] Set ATHENA_PROC_NUMBER=12
[2025-06-04 04:42:33] Set ATHENA_CORE_NUMBER=12
[2025-06-04 04:42:33] Starting ATLAS job with PandaID=6678287101
[2025-06-04 04:42:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:45:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:45:31]  guid=cf747fa0-f510-401d-aa05-a62a3d8f0acc
[2025-06-04 05:45:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 05:45:31]  is_altstaged=None
[2025-06-04 05:45:31]  is_tar=False
[2025-06-04 05:45:31]  lfn=log.45006595._051748.job.log.tgz.1
[2025-06-04 05:45:31]  mtime=0
[2025-06-04 05:45:31]  protocol_id=None
[2025-06-04 05:45:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:45:31]  replicas=None
[2025-06-04 05:45:31]  scope=mc23_13p6TeV
[2025-06-04 05:45:31]  status=None
[2025-06-04 05:45:31]  status_code=0
[2025-06-04 05:45:31]  storage_token=
[2025-06-04 05:45:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678287101/log.45006595._051748.job.log.tgz.1
[2025-06-04 05:45:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/13/log.45006595._051748.job.log.tgz.1
[2025-06-04 05:45:31]  workdir=None
[2025-06-04 05:45:31] ]
[2025-06-04 05:45:31] 2025-06-04 09:45:05,261 | INFO     | transferring file log.45006595._051748.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678287101/log.45006595._051748.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:45:31] 2025-06-04 09:45:05,261 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678287101/log.45006595._051748.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._051748.job
[2025-06-04 05:45:31] 2025-06-04 09:45:05,285 | INFO     | adding to output.list: log.45006595._051748.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/13/log.45006595._051748.job.log.tg
[2025-06-04 05:45:31] 2025-06-04 09:45:05,286 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:45:31] 2025-06-04 09:45:05,287 | INFO     | summary of transferred files:
[2025-06-04 05:45:31] 2025-06-04 09:45:05,287 | INFO     |  -- lfn=log.45006595._051748.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:45:31] 2025-06-04 09:45:05,287 | INFO     | stage-out finished correctly
[2025-06-04 05:45:31] 2025-06-04 09:45:06,839 | INFO     | monitor loop #283: job 0:6678287101 is in state 'finished'
[2025-06-04 05:45:31] 2025-06-04 09:45:06,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:45:31] 2025-06-04 09:45:06,941 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:45:31] 2025-06-04 09:45:07,022 | INFO     | job 6678287101 has state=finished
[2025-06-04 05:45:31] 2025-06-04 09:45:07,022 | INFO     | preparing for final server update for job 6678287101 in state='finished'
[2025-06-04 05:45:31] 2025-06-04 09:45:07,023 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:45:31] 2025-06-04 09:45:07,023 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:45:31] 2025-06-04 09:45:07,023 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:45:31] 2025-06-04 09:45:07,023 | INFO     | job 6678287101 has finished - writing final server update
[2025-06-04 05:45:31] 2025-06-04 09:45:07,024 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:45:31] 2025-06-04 09:45:07,025 | INFO     | executing command: lscpu
[2025-06-04 05:45:31] 2025-06-04 09:45:07,057 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:45:31] 2025-06-04 09:45:09,351 | INFO     | monitor loop #284: job 0:6678287101 is in state 'finished'
[2025-06-04 05:45:31] 2025-06-04 09:45:09,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:45:31] 2025-06-04 09:45:09,492 | INFO     | PID=15240 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:45:31] 2025-06-04 09:45:11,831 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 05:45:31] 2025-06-04 09:45:11,831 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678287101/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:45:31] 2025-06-04 09:45:11,832 | INFO     | extracted standard info from prmon json
[2025-06-04 05:45:31] 2025-06-04 09:45:11,833 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:45:31] 2025-06-04 09:45:11,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:45:31] 2025-06-04 09:45:11,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:45:31] 2025-06-04 09:45:11,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:45:31] 2025-06-04 09:45:11,835 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:45:31] 2025-06-04 09:45:11,836 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 05:45:31] 2025-06-04 09:45:11,836 | INFO     | sum of deviations: -5557232248.0
[2025-06-04 05:45:31] 2025-06-04 09:45:11,836 | INFO     | mean x: 1749028518.5
[2025-06-04 05:45:31] 2025-06-04 09:45:11,837 | INFO     | mean y: 2799065.0
[2025-06-04 05:45:31] 2025-06-04 09:45:11,837 | INFO     | -- intersect: 199136467864.56772
[2025-06-04 05:45:31] 2025-06-04 09:45:11,837 | INFO     | intersect: 199136467864.56772
[2025-06-04 05:45:31] 2025-06-04 09:45:11,837 | INFO     | chi2: 0.05264476915320335
[2025-06-04 05:45:31] 2025-06-04 09:45:11,837 | INFO     | -- intersect: 199136467864.56772
[2025-06-04 05:45:31] 2025-06-04 09:45:11,838 | INFO     | current memory leak: -113.85 B/s (using 54 data points, chi2=0.05)
[2025-06-04 05:45:31] 2025-06-04 09:45:11,838 | INFO     | ..............................
[2025-06-04 05:45:31] 2025-06-04 09:45:11,838 | INFO     | . Timing measurements:
[2025-06-04 05:45:31] 2025-06-04 09:45:11,838 | INFO     | . get job = 0 s
[2025-06-04 05:45:31] 2025-06-04 09:45:11,838 | INFO     | . initial setup = 2 s
[2025-06-04 05:45:31] 2025-06-04 09:45:11,838 | INFO     | . payload setup = 9 s
[2025-06-04 05:45:31] 2025-06-04 09:45:11,839 | INFO     | . stage-in = 0 s
[2025-06-04 05:45:31] 2025-06-04 09:45:11,844 | INFO     | . payload execution = 3708 s
[2025-06-04 05:45:31] 2025-06-04 09:45:11,844 | INFO     | . stage-out = 0 s
[2025-06-04 05:45:31] 2025-06-04 09:45:11,845 | INFO     | . log creation = 0 s
[2025-06-04 05:45:31] 2025-06-04 09:45:11,845 | INFO     | ..............................
[2025-06-04 05:45:31] 2025-06-04 09:45:11,930 | INFO     | 
[2025-06-04 05:45:31] 2025-06-04 09:45:11,930 | INFO     | job summary report
[2025-06-04 05:45:31] 2025-06-04 09:45:11,930 | INFO     | --------------------------------------------------
[2025-06-04 05:45:31] 2025-06-04 09:45:11,930 | INFO     | PanDA job id: 6678287101
[2025-06-04 05:45:31] 2025-06-04 09:45:11,931 | INFO     | task id: 45006595
[2025-06-04 05:45:31] 2025-06-04 09:45:11,931 | INFO     | errors: (none)
[2025-06-04 05:45:31] 2025-06-04 09:45:11,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:45:31] 2025-06-04 09:45:11,931 | INFO     | pilot state: finished 
[2025-06-04 05:45:31] 2025-06-04 09:45:11,931 | INFO     | transexitcode: 0
[2025-06-04 05:45:31] 2025-06-04 09:45:11,931 | INFO     | exeerrorcode: 0
[2025-06-04 05:45:31] 2025-06-04 09:45:11,932 | INFO     | exeerrordiag: 
[2025-06-04 05:45:31] 2025-06-04 09:45:11,932 | INFO     | exitcode: 0
[2025-06-04 05:45:31] 2025-06-04 09:45:11,932 | INFO     | exitmsg: OK
[2025-06-04 05:45:31] 2025-06-04 09:45:11,932 | INFO     | cpuconsumptiontime: 39582 s
[2025-06-04 05:45:31] 2025-06-04 09:45:11,932 | INFO     | nevents: 400
[2025-06-04 05:45:31] 2025-06-04 09:45:11,932 | INFO     | neventsw: 0
[2025-06-04 05:45:31] 2025-06-04 09:45:11,932 | INFO     | pid: 21709
[2025-06-04 05:45:31] 2025-06-04 09:45:11,933 | INFO     | pgrp: 21709
[2025-06-04 05:45:31] 2025-06-04 09:45:11,933 | INFO     | corecount: 12
[2025-06-04 05:45:31] 2025-06-04 09:45:11,933 | INFO     | event service: False
[2025-06-04 05:45:31] 2025-06-04 09:45:11,933 | INFO     | sizes: {0: 2404356, 1: 2405212, 6: 2405418, 12: 2405446, 3722: 2431070, 3723: 2440011, 3725: 2440195, 3730: 2440365}
[2025-06-04 05:45:31] 2025-06-04 09:45:11,933 | INFO     | --------------------------------------------------
[2025-06-04 05:45:31] 2025-06-04 09:45:11,933 | INFO     | 
[2025-06-04 05:45:31] 2025-06-04 09:45:11,934 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:45:31] 2025-06-04 09:45:11,959 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,960 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,960 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,960 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,962 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:45:31] 2025-06-04 09:45:11,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,962 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:45:31] 2025-06-04 09:45:11,963 | INFO     | job 6678287101 has completed (purged errors)
[2025-06-04 05:45:31] 2025-06-04 09:45:11,963 | INFO     | overall cleanup function is called
[2025-06-04 05:45:31] 2025-06-04 09:45:12,971 | INFO     | --- collectZombieJob: --- 10, [21709]
[2025-06-04 05:45:31] 2025-06-04 09:45:12,971 | INFO     | zombie collector waiting for pid 21709
[2025-06-04 05:45:31] 2025-06-04 09:45:12,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:45:31] 2025-06-04 09:45:12,972 | INFO     | collected zombie processes
[2025-06-04 05:45:31] 2025-06-04 09:45:12,972 | INFO     | will attempt to kill all subprocesses of pid=21709
[2025-06-04 05:45:31] 2025-06-04 09:45:13,068 | INFO     | process IDs to be killed: [21709] (in reverse order)
[2025-06-04 05:45:31] 2025-06-04 09:45:13,119 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:45:31] 2025-06-04 09:45:13,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:45:31] 2025-06-04 09:45:13,124 | INFO     | did not find any defunct processes belonging to 21709
[2025-06-04 05:45:31] 2025-06-04 09:45:13,127 | INFO     | did not find any defunct processes belonging to 21709
[2025-06-04 05:45:31] 2025-06-04 09:45:13,127 | INFO     | ready for new job
[2025-06-04 05:45:31] 2025-06-04 09:45:13,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:45:31] 2025-06-04 09:45:13,128 | INFO     | **************************************
[2025-06-04 05:45:31] 2025-06-04 09:45:13,129 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:45:31] 2025-06-04 09:45:13,129 | INFO     | **************************************
[2025-06-04 05:45:31] 2025-06-04 09:45:13,129 | INFO     | 
[2025-06-04 05:45:31] 2025-06-04 09:45:13,129 | INFO     | architecture information:
[2025-06-04 05:45:31] 2025-06-04 09:45:13,130 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:45:31] 2025-06-04 09:45:13,144 | INFO     | cat /etc/os-release:
[2025-06-04 05:45:31] NAME="CentOS Linux"
[2025-06-04 05:45:31] VERSION="7 (Core)"
[2025-06-04 05:45:31] ID="centos"
[2025-06-04 05:45:31] ID_LIKE="rhel fedora"
[2025-06-04 05:45:31] VERSION_ID="7"
[2025-06-04 05:45:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:45:31] ANSI_COLOR="0;31"
[2025-06-04 05:45:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:45:31] HOME_URL="https://www.centos.org/"
[2025-06-04 05:45:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:45:31] 
[2025-06-04 05:45:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:45:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:45:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:45:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:45:31] 
[2025-06-04 05:45:31] 2025-06-04 09:45:13,145 | INFO     | **************************************
[2025-06-04 05:45:31] 2025-06-04 09:45:13,646 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:45:31] 2025-06-04 09:45:13,663 | INFO     | sufficient remaining disk space (29425139712 B)
[2025-06-04 05:45:31] 2025-06-04 09:45:13,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:45:31] 2025-06-04 09:45:13,664 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:45:31] 2025-06-04 09:45:13,664 | INFO     | update_server=False
[2025-06-04 05:45:31] 2025-06-04 09:45:13,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:45:31] 2025-06-04 09:45:13,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:45:31] 2025-06-04 09:45:13,665 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:45:31] 2025-06-04 09:45:13,665 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:45:31] 2025-06-04 09:45:13,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:45:31] 2025-06-04 09:45:13,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:45:31] 2025-06-04 09:45:13,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:45:31] 2025-06-04 09:45:13,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:45:31] 2025-06-04 09:45:13,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:45:31] 2025-06-04 09:45:13,666 | INFO     | aborting loop
[2025-06-04 05:45:31] 2025-06-04 09:45:14,332 | INFO     | all data control threads have been joined
[2025-06-04 05:45:31] 2025-06-04 09:45:14,667 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:14,669 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:14,672 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:14,700 | INFO     | all job control threads have been joined
[2025-06-04 05:45:31] 2025-06-04 09:45:14,747 | INFO     | all payload control threads have been joined
[2025-06-04 05:45:31] 2025-06-04 09:45:14,758 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:14,837 | INFO     | [job] validate thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:15,115 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:15,266 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:15,336 | INFO     | [data] control thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:15,506 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:15,575 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:15,617 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:15,672 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:15,705 | INFO     | [job] control thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:15,752 | INFO     | [payload] control thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:17,666 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:24,411 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:45:31] 2025-06-04 09:45:25,416 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:45:31] 2025-06-04 09:45:26,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145612011328)>', '<ExcThread(monitor, started 140145177126656)>']
[2025-06-04 05:45:31] 2025-06-04 09:45:26,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:45:31] 2025-06-04 09:45:26,727 | INFO     | [monitor] control thread has ended
[2025-06-04 05:45:31] 2025-06-04 09:45:31,616 | INFO     | all workflow threads have been joined
[2025-06-04 05:45:31] 2025-06-04 09:45:31,616 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:45:31] 2025-06-04 09:45:31,616 | INFO     | traces error code: 0
[2025-06-04 05:45:31] 2025-06-04 09:45:31,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:45:31] 2025-06-04 09:45:31,710 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:45:31] 2025-06-04 09:45:31,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:45:31] 2025-06-04 09:45:31,717 [wrapper] pilotpid: 15240
[2025-06-04 05:45:31] 2025-06-04 09:45:31,721 [wrapper] Pilot exit status: 0
[2025-06-04 05:45:31] 2025-06-04 09:45:31,737 [wrapper] pandaids: 6678287101
[2025-06-04 05:45:31] 2025-06-04 09:45:31,776 [wrapper] cleanup supervisor_pilot  5902 15241
[2025-06-04 05:45:31] 2025-06-04 09:45:31,780 [wrapper] Test setup, not cleaning
[2025-06-04 05:45:31] 2025-06-04 09:45:31,784 [wrapper] apfmon messages muted
[2025-06-04 05:45:31] 2025-06-04 09:45:31,788 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:45:31] 2025-06-04 09:45:31,792 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:45:31]  *** Error codes and diagnostics ***
[2025-06-04 05:45:31]     "exeErrorCode": 0,
[2025-06-04 05:45:31]     "exeErrorDiag": "",
[2025-06-04 05:45:31]     "pilotErrorCode": 0,
[2025-06-04 05:45:31]     "pilotErrorDiag": "",
[2025-06-04 05:45:31]  *** Listing of results directory ***
[2025-06-04 05:45:31] total 385960
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 23:29 pilot3.tar.gz
[2025-06-04 05:45:31] -rwx------ 1 boincer umatlas     37140 Jun  3 23:42 runpilot2-wrapper.sh
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:42 queuedata.json
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas       100 Jun  4 04:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:45:31] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 04:42 run_atlas
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas       105 Jun  4 04:42 job.xml
[2025-06-04 05:45:31] -rw-r--r-- 2 boincer umatlas 216244561 Jun  4 04:42 EVNT.45006593._002073.pool.root.1
[2025-06-04 05:45:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:42 start_atlas.sh
[2025-06-04 05:45:31] drwxrwx--x 2 boincer umatlas      4096 Jun  4 04:42 shared
[2025-06-04 05:45:31] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 04:42 input.tar.gz
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas         0 Jun  4 04:42 boinc_lockfile
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 04:42 pandaJob.out
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas    986774 Jun  4 04:42 agis_schedconf.cvmfs.json
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas   1603667 Jun  4 04:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:45:31] drwx------ 4 boincer umatlas      4096 Jun  4 04:42 pilot3
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 05:40 init_data.xml
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas        95 Jun  4 05:44 pilot_heartbeat.json
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas       529 Jun  4 05:44 boinc_task_state.xml
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas 173671042 Jun  4 05:44 HITS.45006595._051748.pool.root.1
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas      1049 Jun  4 05:45 memory_monitor_summary.json
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:45 wrapper_checkpoint.txt
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:45 boinc_mmap_file
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas    364134 Jun  4 05:45 log.45006595._051748.job.log.tgz.1
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas      7750 Jun  4 05:45 heartbeat.json
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas      4548 Jun  4 05:45 pilotlog.txt
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas    370549 Jun  4 05:45 log.45006595._051748.job.log.1
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas       357 Jun  4 05:45 output.list
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:45 runtime_log
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas    757760 Jun  4 05:45 result.tar.gz
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 05:45 runtime_log.err
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas       659 Jun  4 05:45 ej9LDmCCug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA5mKDme8ziVo.diag
[2025-06-04 05:45:31] -rw-r--r-- 1 boincer umatlas     21365 Jun  4 05:45 stderr.txt
[2025-06-04 05:45:31] HITS file was successfully produced:
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas 173671042 Jun  4 05:44 shared/HITS.pool.root.1
[2025-06-04 05:45:31]  *** Contents of shared directory: ***
[2025-06-04 05:45:31] total 382044
[2025-06-04 05:45:31] -rw-r--r-- 2 boincer umatlas 216244561 Jun  4 04:42 ATLAS.root_0
[2025-06-04 05:45:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:42 start_atlas.sh
[2025-06-04 05:45:31] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 04:42 input.tar.gz
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas 173671042 Jun  4 05:44 HITS.pool.root.1
[2025-06-04 05:45:31] -rw------- 1 boincer umatlas    757760 Jun  4 05:45 result.tar.gz
05:45:32 (11641): run_atlas exited; CPU time 39508.612051
05:45:32 (11641): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN