Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:11 (1088288): wrapper (7.7.26015): starting
15:31:11 (1088288): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:31:11] Arguments: --nthreads 8
[2025-06-04 15:31:11] Threads: 8
[2025-06-04 15:31:11] Checking for CVMFS
[2025-06-04 15:31:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:31:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:31:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:31:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:31:11] 2.13.0.0 42761 2532 72956 146781 3 55 3922470 4097024 0 130560 0 2007859 99.994 388031 50969 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 15:31:11] CVMFS is ok
[2025-06-04 15:31:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:31:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:31:11] Further information can be found at the LHC@home message board.
[2025-06-04 15:31:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:31:11] Checking for apptainer binary...
[2025-06-04 15:31:11] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 15:31:11] apptainer is not installed, using version from CVMFS
[2025-06-04 15:31:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:31:12] pckeatlas02
[2025-06-04 15:31:12] apptainer works
[2025-06-04 15:31:12] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:31:12] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:31:12] Starting ATLAS job with PandaID=6667103785
[2025-06-04 15:31:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:06:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:06:13]  filetype=log
[2025-06-04 17:06:13]  guid=6fbffdd4-25b1-4d04-a394-480fba8534f4
[2025-06-04 17:06:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 17:06:13]  is_altstaged=None
[2025-06-04 17:06:13]  is_tar=False
[2025-06-04 17:06:13]  lfn=log.44871837._069024.job.log.tgz.1
[2025-06-04 17:06:13]  mtime=0
[2025-06-04 17:06:13]  protocol_id=None
[2025-06-04 17:06:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:06:13]  replicas=None
[2025-06-04 17:06:13]  scope=mc23_13p6TeV
[2025-06-04 17:06:13]  status=None
[2025-06-04 17:06:13]  status_code=0
[2025-06-04 17:06:13]  storage_token=
[2025-06-04 17:06:13]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6667103785/log.44871837._069024.job.log.tgz.1
[2025-06-04 17:06:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/02/log.44871837._069024.job.log.tgz.1
[2025-06-04 17:06:13]  workdir=None
[2025-06-04 17:06:13] ]
[2025-06-04 17:06:13] 2025-06-04 15:05:49,765 | INFO     | transferring file log.44871837._069024.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6667103785/log.44871837._069024.job.log.tgz.1 to /var/lib/boinc/slots
[2025-06-04 17:06:13] 2025-06-04 15:05:49,765 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6667103785/log.44871837._069024.job.log.tgz.1 /var/lib/boinc/slots/19/log.44871837._069024.j
[2025-06-04 17:06:13] 2025-06-04 15:05:49,773 | INFO     | adding to output.list: log.44871837._069024.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/02/log.44871837._069024.job.log.tg
[2025-06-04 17:06:13] 2025-06-04 15:05:49,774 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:06:13] 2025-06-04 15:05:49,774 | INFO     | summary of transferred files:
[2025-06-04 17:06:13] 2025-06-04 15:05:49,774 | INFO     |  -- lfn=log.44871837._069024.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:06:13] 2025-06-04 15:05:49,774 | INFO     | stage-out finished correctly
[2025-06-04 17:06:13] 2025-06-04 15:05:51,055 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:06:13] 2025-06-04 15:05:51,133 | INFO     | monitor loop #432: job 0:6667103785 is in state 'finished'
[2025-06-04 17:06:13] 2025-06-04 15:05:51,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:06:13] 2025-06-04 15:05:52,670 | INFO     | 5677s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 17:06:13] 2025-06-04 15:05:53,636 | INFO     | monitor loop #433: job 0:6667103785 is in state 'finished'
[2025-06-04 17:06:13] 2025-06-04 15:05:53,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:06:13] 2025-06-04 15:05:53,639 | INFO     | job 6667103785 has state=finished
[2025-06-04 17:06:13] 2025-06-04 15:05:53,639 | INFO     | preparing for final server update for job 6667103785 in state='finished'
[2025-06-04 17:06:13] 2025-06-04 15:05:53,639 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:06:13] 2025-06-04 15:05:53,639 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:06:13] 2025-06-04 15:05:53,639 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:06:13] 2025-06-04 15:05:53,639 | INFO     | job 6667103785 has finished - writing final server update
[2025-06-04 17:06:13] 2025-06-04 15:05:53,640 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:06:13] 2025-06-04 15:05:53,641 | INFO     | executing command: lscpu
[2025-06-04 17:06:13] 2025-06-04 15:05:53,649 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:06:13] 2025-06-04 15:05:55,009 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:06:13] 2025-06-04 15:05:55,009 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6667103785/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:06:13] 2025-06-04 15:05:55,010 | INFO     | extracted standard info from prmon json
[2025-06-04 17:06:13] 2025-06-04 15:05:55,010 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:06:13] 2025-06-04 15:05:55,010 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:06:13] 2025-06-04 15:05:55,010 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:06:13] 2025-06-04 15:05:55,010 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:06:13] 2025-06-04 15:05:55,011 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:06:13] 2025-06-04 15:05:55,011 | INFO     | sum of square deviations: 197203697.5
[2025-06-04 17:06:13] 2025-06-04 15:05:55,011 | INFO     | sum of deviations: -19014660384.0
[2025-06-04 17:06:13] 2025-06-04 15:05:55,011 | INFO     | mean x: 1749046791.5
[2025-06-04 17:06:13] 2025-06-04 15:05:55,011 | INFO     | mean y: 2853439.534883721
[2025-06-04 17:06:13] 2025-06-04 15:05:55,011 | INFO     | -- intersect: 168648427319.29114
[2025-06-04 17:06:13] 2025-06-04 15:05:55,011 | INFO     | intersect: 168648427319.29114
[2025-06-04 17:06:13] 2025-06-04 15:05:55,011 | INFO     | chi2: 0.1677984455005206
[2025-06-04 17:06:13] 2025-06-04 15:05:55,011 | INFO     | -- intersect: 168648427319.29114
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | current memory leak: -96.42 B/s (using 86 data points, chi2=0.17)
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | ..............................
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | . Timing measurements:
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | . get job = 0 s
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | . initial setup = 0 s
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | . payload setup = 3 s
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | . stage-in = 0 s
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | . payload execution = 5654 s
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | . stage-out = 0 s
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | . log creation = 0 s
[2025-06-04 17:06:13] 2025-06-04 15:05:55,012 | INFO     | ..............................
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | 
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | job summary report
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | --------------------------------------------------
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | PanDA job id: 6667103785
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | task id: 44871837
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | errors: (none)
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | pilot state: finished 
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | transexitcode: 0
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | exeerrorcode: 0
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | exeerrordiag: 
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | exitcode: 0
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | exitmsg: OK
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | cpuconsumptiontime: 43431 s
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | nevents: 400
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | neventsw: 0
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | pid: 1099085
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | pgrp: 1099085
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | corecount: 8
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | event service: False
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | sizes: {0: 2397393, 1: 2397599, 10: 2397627, 5660: 2424221, 5661: 2433219, 5663: 2433219, 5666: 2433517}
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | --------------------------------------------------
[2025-06-04 17:06:13] 2025-06-04 15:05:55,548 | INFO     | 
[2025-06-04 17:06:13] 2025-06-04 15:05:55,549 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | job 6667103785 has completed (purged errors)
[2025-06-04 17:06:13] 2025-06-04 15:05:55,558 | INFO     | overall cleanup function is called
[2025-06-04 17:06:13] 2025-06-04 15:05:56,564 | INFO     | --- collectZombieJob: --- 10, [1099085]
[2025-06-04 17:06:13] 2025-06-04 15:05:56,564 | INFO     | zombie collector waiting for pid 1099085
[2025-06-04 17:06:13] 2025-06-04 15:05:56,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:06:13] 2025-06-04 15:05:56,564 | INFO     | collected zombie processes
[2025-06-04 17:06:13] 2025-06-04 15:05:56,564 | INFO     | will attempt to kill all subprocesses of pid=1099085
[2025-06-04 17:06:13] 2025-06-04 15:05:56,596 | INFO     | process IDs to be killed: [1099085] (in reverse order)
[2025-06-04 17:06:13] 2025-06-04 15:05:56,612 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:06:13] 2025-06-04 15:05:56,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:06:13] 2025-06-04 15:05:56,613 | INFO     | did not find any defunct processes belonging to 1099085
[2025-06-04 17:06:13] 2025-06-04 15:05:56,613 | INFO     | did not find any defunct processes belonging to 1099085
[2025-06-04 17:06:13] 2025-06-04 15:05:56,613 | INFO     | ready for new job
[2025-06-04 17:06:13] 2025-06-04 15:05:56,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:06:13] 2025-06-04 15:05:56,614 | INFO     | **************************************
[2025-06-04 17:06:13] 2025-06-04 15:05:56,614 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:06:13] 2025-06-04 15:05:56,614 | INFO     | **************************************
[2025-06-04 17:06:13] 2025-06-04 15:05:56,614 | INFO     | 
[2025-06-04 17:06:13] 2025-06-04 15:05:56,615 | INFO     | architecture information:
[2025-06-04 17:06:13] 2025-06-04 15:05:56,615 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:06:13] 2025-06-04 15:05:56,620 | INFO     | cat /etc/os-release:
[2025-06-04 17:06:13] NAME="CentOS Linux"
[2025-06-04 17:06:13] VERSION="7 (Core)"
[2025-06-04 17:06:13] ID="centos"
[2025-06-04 17:06:13] ID_LIKE="rhel fedora"
[2025-06-04 17:06:13] VERSION_ID="7"
[2025-06-04 17:06:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:06:13] ANSI_COLOR="0;31"
[2025-06-04 17:06:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:06:13] HOME_URL="https://www.centos.org/"
[2025-06-04 17:06:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:06:13] 
[2025-06-04 17:06:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:06:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:06:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:06:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:06:13] 
[2025-06-04 17:06:13] 2025-06-04 15:05:56,620 | INFO     | **************************************
[2025-06-04 17:06:13] 2025-06-04 15:05:57,123 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-04 17:06:13] 2025-06-04 15:05:57,130 | INFO     | sufficient remaining disk space (124767961088 B)
[2025-06-04 17:06:13] 2025-06-04 15:05:57,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:06:13] 2025-06-04 15:05:57,130 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:06:13] 2025-06-04 15:05:57,130 | INFO     | update_server=False
[2025-06-04 17:06:13] 2025-06-04 15:05:57,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:06:13] 2025-06-04 15:05:57,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:06:13] 2025-06-04 15:05:57,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:06:13] 2025-06-04 15:05:57,144 | INFO     | aborting loop
[2025-06-04 17:06:13] 2025-06-04 15:05:57,686 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:06:13] 2025-06-04 15:05:57,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:06:13] 2025-06-04 15:05:57,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:06:13] 2025-06-04 15:05:57,772 | INFO     | all job control threads have been joined
[2025-06-04 17:06:13] 2025-06-04 15:05:57,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:06:13] 2025-06-04 15:05:57,913 | INFO     | all data control threads have been joined
[2025-06-04 17:06:13] 2025-06-04 15:05:58,135 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:58,149 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:58,213 | INFO     | [job] validate thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:58,213 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:58,224 | INFO     | all payload control threads have been joined
[2025-06-04 17:06:13] 2025-06-04 15:05:58,341 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:58,353 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:58,415 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:58,778 | INFO     | [job] control thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:58,918 | INFO     | [data] control thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:58,942 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:59,227 | INFO     | [payload] control thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:59,580 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:05:59,826 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:06:00,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:06:13] 2025-06-04 15:06:01,065 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:06:01,136 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:06:07,414 | INFO     | job.realtimelogging is not enabled
[2025-06-04 17:06:13] 2025-06-04 15:06:08,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:06:13] 2025-06-04 15:06:08,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768680376128)>', '<ExcThread(monitor, started 139768125957888)>']
[2025-06-04 17:06:13] 2025-06-04 15:06:08,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:06:13] 2025-06-04 15:06:08,742 | INFO     | [monitor] control thread has ended
[2025-06-04 17:06:13] 2025-06-04 15:06:13,528 | INFO     | all workflow threads have been joined
[2025-06-04 17:06:13] 2025-06-04 15:06:13,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:06:13] 2025-06-04 15:06:13,528 | INFO     | traces error code: 0
[2025-06-04 17:06:13] 2025-06-04 15:06:13,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:06:13] 2025-06-04 15:06:13,586 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:06:13] 2025-06-04 15:06:13,587 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:06:13] 2025-06-04 15:06:13,588 [wrapper] pilotpid: 1091962
[2025-06-04 17:06:13] 2025-06-04 15:06:13,590 [wrapper] Pilot exit status: 0
[2025-06-04 17:06:13] 2025-06-04 15:06:13,593 [wrapper] pandaids: 6667103785
[2025-06-04 17:06:13] 2025-06-04 15:06:13,602 [wrapper] cleanup supervisor_pilot 1115726 1091963
[2025-06-04 17:06:13] 2025-06-04 15:06:13,604 [wrapper] Test setup, not cleaning
[2025-06-04 17:06:13] 2025-06-04 15:06:13,605 [wrapper] apfmon messages muted
[2025-06-04 17:06:13] 2025-06-04 15:06:13,606 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:06:13] 2025-06-04 15:06:13,607 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:06:13]  *** Error codes and diagnostics ***
[2025-06-04 17:06:13]     "exeErrorCode": 0,
[2025-06-04 17:06:13]     "exeErrorDiag": "",
[2025-06-04 17:06:13]     "pilotErrorCode": 0,
[2025-06-04 17:06:13]     "pilotErrorDiag": "",
[2025-06-04 17:06:13]  *** Listing of results directory ***
[2025-06-04 17:06:13] total 407396
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc      5111 May 27 16:40 queuedata.json
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc    495897 May 27 16:41 pilot3.tar.gz
[2025-06-04 17:06:13] -rwx------. 1 boinc boinc     37140 May 27 16:45 runpilot2-wrapper.sh
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:06:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:31 run_atlas
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:31 job.xml
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc      6275 Jun  4 15:31 init_data.xml
[2025-06-04 17:06:13] -rw-r--r--. 2 boinc boinc 221328987 Jun  4 15:31 EVNT.44871834._002715.pool.root.1
[2025-06-04 17:06:13] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:31 start_atlas.sh
[2025-06-04 17:06:13] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:31 shared
[2025-06-04 17:06:13] -rw-r--r--. 2 boinc boinc    508881 Jun  4 15:31 input.tar.gz
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:31 boinc_lockfile
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc      2559 Jun  4 15:31 pandaJob.out
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc    986819 Jun  4 15:31 agis_schedconf.cvmfs.json
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc   1598969 Jun  4 15:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:06:13] drwx------. 4 boinc boinc      4096 Jun  4 15:31 pilot3
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc 190342498 Jun  4 17:05 HITS.44871837._069024.pool.root.1
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc       529 Jun  4 17:05 boinc_task_state.xml
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc      1010 Jun  4 17:05 memory_monitor_summary.json
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc    300009 Jun  4 17:05 log.44871837._069024.job.log.tgz.1
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc        95 Jun  4 17:05 pilot_heartbeat.json
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc      7671 Jun  4 17:05 heartbeat.json
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc      8192 Jun  4 17:06 boinc_mmap_file
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc        27 Jun  4 17:06 wrapper_checkpoint.txt
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc      4427 Jun  4 17:06 pilotlog.txt
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc    543347 Jun  4 17:06 log.44871837._069024.job.log.1
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc       357 Jun  4 17:06 output.list
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc       620 Jun  4 17:06 runtime_log
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc    860160 Jun  4 17:06 result.tar.gz
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc       649 Jun  4 17:06 W9VNDmDjAe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmShZKDmclK8nm.diag
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc      8686 Jun  4 17:06 runtime_log.err
[2025-06-04 17:06:13] -rw-r--r--. 1 boinc boinc     21278 Jun  4 17:06 stderr.txt
[2025-06-04 17:06:13] HITS file was successfully produced:
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc 190342498 Jun  4 17:05 shared/HITS.pool.root.1
[2025-06-04 17:06:13]  *** Contents of shared directory: ***
[2025-06-04 17:06:13] total 403384
[2025-06-04 17:06:13] -rw-r--r--. 2 boinc boinc 221328987 Jun  4 15:31 ATLAS.root_0
[2025-06-04 17:06:13] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:31 start_atlas.sh
[2025-06-04 17:06:13] -rw-r--r--. 2 boinc boinc    508881 Jun  4 15:31 input.tar.gz
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc 190342498 Jun  4 17:05 HITS.pool.root.1
[2025-06-04 17:06:13] -rw-------. 1 boinc boinc    860160 Jun  4 17:06 result.tar.gz
17:06:15 (1088288): run_atlas exited; CPU time 43475.547663
17:06:15 (1088288): called boinc_finish(0)

</stderr_txt>
]]>

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