Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:53:36 (26103): wrapper (7.7.26015): starting
04:53:36 (26103): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 04:53:36] Arguments: --nthreads 12
[2025-06-04 04:53:36] Threads: 12
[2025-06-04 04:53:36] Checking for CVMFS
[2025-06-04 04:53:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:53:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:53:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:53:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:53:36] 2.11.2.0 2933 35467 86340 146773 1 58 18349225 20275201 1 130560 0 15756820 99.983 6147531 7548 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 04:53:36] CVMFS is ok
[2025-06-04 04:53:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:53:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:53:36] Further information can be found at the LHC@home message board.
[2025-06-04 04:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:53:36] Checking for apptainer binary...
[2025-06-04 04:53:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:53:36] Running /usr/bin/apptainer --version
[2025-06-04 04:53:37] apptainer version 1.3.2-1.el7
[2025-06-04 04:53:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:53:38] c-205-15.aglt2.org
[2025-06-04 04:53:38] apptainer works
[2025-06-04 04:53:38] Set ATHENA_PROC_NUMBER=12
[2025-06-04 04:53:38] Set ATHENA_CORE_NUMBER=12
[2025-06-04 04:53:38] Starting ATLAS job with PandaID=6678287222
[2025-06-04 04:53:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:58:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:58:30]  protocol_id=None
[2025-06-04 05:58:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:58:30]  replicas=None
[2025-06-04 05:58:30]  scope=mc23_13p6TeV
[2025-06-04 05:58:30]  status=None
[2025-06-04 05:58:30]  status_code=0
[2025-06-04 05:58:30]  storage_token=
[2025-06-04 05:58:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678287222/log.45006595._051869.job.log.tgz.1
[2025-06-04 05:58:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/fc/log.45006595._051869.job.log.tgz.1
[2025-06-04 05:58:30]  workdir=None
[2025-06-04 05:58:30] ]
[2025-06-04 05:58:30] 2025-06-04 09:58:06,046 | INFO     | transferring file log.45006595._051869.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678287222/log.45006595._051869.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:58:30] 2025-06-04 09:58:06,046 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678287222/log.45006595._051869.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._051869.job
[2025-06-04 05:58:30] 2025-06-04 09:58:06,068 | INFO     | adding to output.list: log.45006595._051869.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/fc/log.45006595._051869.job.log.tg
[2025-06-04 05:58:30] 2025-06-04 09:58:06,069 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:58:30] 2025-06-04 09:58:06,069 | INFO     | summary of transferred files:
[2025-06-04 05:58:30] 2025-06-04 09:58:06,069 | INFO     |  -- lfn=log.45006595._051869.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:58:30] 2025-06-04 09:58:06,070 | INFO     | stage-out finished correctly
[2025-06-04 05:58:30] 2025-06-04 09:58:06,668 | INFO     | monitor loop #287: job 0:6678287222 is in state 'finished'
[2025-06-04 05:58:30] 2025-06-04 09:58:06,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:58:30] 2025-06-04 09:58:07,430 | INFO     | PID=29692 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:58:30] 2025-06-04 09:58:09,171 | INFO     | monitor loop #288: job 0:6678287222 is in state 'finished'
[2025-06-04 05:58:30] 2025-06-04 09:58:09,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:58:30] 2025-06-04 09:58:09,435 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:58:30] 2025-06-04 09:58:11,675 | INFO     | monitor loop #289: job 0:6678287222 is in state 'finished'
[2025-06-04 05:58:30] 2025-06-04 09:58:11,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:58:30] 2025-06-04 09:58:12,384 | INFO     | job 6678287222 has state=finished
[2025-06-04 05:58:30] 2025-06-04 09:58:12,384 | INFO     | preparing for final server update for job 6678287222 in state='finished'
[2025-06-04 05:58:30] 2025-06-04 09:58:12,385 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:58:30] 2025-06-04 09:58:12,385 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:58:30] 2025-06-04 09:58:12,385 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:58:30] 2025-06-04 09:58:12,385 | INFO     | job 6678287222 has finished - writing final server update
[2025-06-04 05:58:30] 2025-06-04 09:58:12,385 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:58:30] 2025-06-04 09:58:12,389 | INFO     | executing command: lscpu
[2025-06-04 05:58:30] 2025-06-04 09:58:12,421 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:58:30] 2025-06-04 09:58:14,178 | INFO     | monitor loop #290: job 0:6678287222 is in state 'finished'
[2025-06-04 05:58:30] 2025-06-04 09:58:14,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:58:30] 2025-06-04 09:58:16,681 | INFO     | monitor loop #291: job 0:6678287222 is in state 'finished'
[2025-06-04 05:58:30] 2025-06-04 09:58:16,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:58:30] 2025-06-04 09:58:17,041 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 05:58:30] 2025-06-04 09:58:17,042 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678287222/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:58:30] 2025-06-04 09:58:17,043 | INFO     | extracted standard info from prmon json
[2025-06-04 05:58:30] 2025-06-04 09:58:17,043 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:58:30] 2025-06-04 09:58:17,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:58:30] 2025-06-04 09:58:17,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:58:30] 2025-06-04 09:58:17,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:58:30] 2025-06-04 09:58:17,045 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:58:30] 2025-06-04 09:58:17,045 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 05:58:30] 2025-06-04 09:58:17,046 | INFO     | sum of deviations: -3889810850.9999995
[2025-06-04 05:58:30] 2025-06-04 09:58:17,046 | INFO     | mean x: 1749029244.5
[2025-06-04 05:58:30] 2025-06-04 09:58:17,046 | INFO     | mean y: 2729339.1071428573
[2025-06-04 05:58:30] 2025-06-04 09:58:17,046 | INFO     | -- intersect: 124977272669.6385
[2025-06-04 05:58:30] 2025-06-04 09:58:17,046 | INFO     | intersect: 124977272669.6385
[2025-06-04 05:58:30] 2025-06-04 09:58:17,046 | INFO     | chi2: 0.0649167738782783
[2025-06-04 05:58:30] 2025-06-04 09:58:17,047 | INFO     | -- intersect: 124977272669.6385
[2025-06-04 05:58:30] 2025-06-04 09:58:17,047 | INFO     | current memory leak: -71.45 B/s (using 56 data points, chi2=0.06)
[2025-06-04 05:58:30] 2025-06-04 09:58:17,047 | INFO     | ..............................
[2025-06-04 05:58:30] 2025-06-04 09:58:17,047 | INFO     | . Timing measurements:
[2025-06-04 05:58:30] 2025-06-04 09:58:17,047 | INFO     | . get job = 0 s
[2025-06-04 05:58:30] 2025-06-04 09:58:17,047 | INFO     | . initial setup = 2 s
[2025-06-04 05:58:30] 2025-06-04 09:58:17,047 | INFO     | . payload setup = 9 s
[2025-06-04 05:58:30] 2025-06-04 09:58:17,048 | INFO     | . stage-in = 0 s
[2025-06-04 05:58:30] 2025-06-04 09:58:17,048 | INFO     | . payload execution = 3824 s
[2025-06-04 05:58:30] 2025-06-04 09:58:17,048 | INFO     | . stage-out = 0 s
[2025-06-04 05:58:30] 2025-06-04 09:58:17,048 | INFO     | . log creation = 0 s
[2025-06-04 05:58:30] 2025-06-04 09:58:17,048 | INFO     | ..............................
[2025-06-04 05:58:30] 2025-06-04 09:58:17,131 | INFO     | 
[2025-06-04 05:58:30] 2025-06-04 09:58:17,131 | INFO     | job summary report
[2025-06-04 05:58:30] 2025-06-04 09:58:17,131 | INFO     | --------------------------------------------------
[2025-06-04 05:58:30] 2025-06-04 09:58:17,131 | INFO     | PanDA job id: 6678287222
[2025-06-04 05:58:30] 2025-06-04 09:58:17,131 | INFO     | task id: 45006595
[2025-06-04 05:58:30] 2025-06-04 09:58:17,132 | INFO     | errors: (none)
[2025-06-04 05:58:30] 2025-06-04 09:58:17,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:58:30] 2025-06-04 09:58:17,132 | INFO     | pilot state: finished 
[2025-06-04 05:58:30] 2025-06-04 09:58:17,132 | INFO     | transexitcode: 0
[2025-06-04 05:58:30] 2025-06-04 09:58:17,132 | INFO     | exeerrorcode: 0
[2025-06-04 05:58:30] 2025-06-04 09:58:17,132 | INFO     | exeerrordiag: 
[2025-06-04 05:58:30] 2025-06-04 09:58:17,132 | INFO     | exitcode: 0
[2025-06-04 05:58:30] 2025-06-04 09:58:17,133 | INFO     | exitmsg: OK
[2025-06-04 05:58:30] 2025-06-04 09:58:17,133 | INFO     | cpuconsumptiontime: 40704 s
[2025-06-04 05:58:30] 2025-06-04 09:58:17,133 | INFO     | nevents: 400
[2025-06-04 05:58:30] 2025-06-04 09:58:17,133 | INFO     | neventsw: 0
[2025-06-04 05:58:30] 2025-06-04 09:58:17,133 | INFO     | pid: 3904
[2025-06-04 05:58:30] 2025-06-04 09:58:17,133 | INFO     | pgrp: 3904
[2025-06-04 05:58:30] 2025-06-04 09:58:17,134 | INFO     | corecount: 12
[2025-06-04 05:58:30] 2025-06-04 09:58:17,134 | INFO     | event service: False
[2025-06-04 05:58:30] 2025-06-04 09:58:17,134 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 3837: 2431069, 3838: 2440010, 3842: 2440066, 3849: 2440364}
[2025-06-04 05:58:30] 2025-06-04 09:58:17,134 | INFO     | --------------------------------------------------
[2025-06-04 05:58:30] 2025-06-04 09:58:17,134 | INFO     | 
[2025-06-04 05:58:30] 2025-06-04 09:58:17,134 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:58:30] 2025-06-04 09:58:17,157 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,158 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,158 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,158 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,160 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,160 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,160 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:58:30] 2025-06-04 09:58:17,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,161 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:58:30] 2025-06-04 09:58:17,161 | INFO     | job 6678287222 has completed (purged errors)
[2025-06-04 05:58:30] 2025-06-04 09:58:17,161 | INFO     | overall cleanup function is called
[2025-06-04 05:58:30] 2025-06-04 09:58:18,169 | INFO     | --- collectZombieJob: --- 10, [3904]
[2025-06-04 05:58:30] 2025-06-04 09:58:18,170 | INFO     | zombie collector waiting for pid 3904
[2025-06-04 05:58:30] 2025-06-04 09:58:18,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:58:30] 2025-06-04 09:58:18,170 | INFO     | collected zombie processes
[2025-06-04 05:58:30] 2025-06-04 09:58:18,170 | INFO     | will attempt to kill all subprocesses of pid=3904
[2025-06-04 05:58:30] 2025-06-04 09:58:18,261 | INFO     | process IDs to be killed: [3904] (in reverse order)
[2025-06-04 05:58:30] 2025-06-04 09:58:18,309 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:58:30] 2025-06-04 09:58:18,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:58:30] 2025-06-04 09:58:18,313 | INFO     | did not find any defunct processes belonging to 3904
[2025-06-04 05:58:30] 2025-06-04 09:58:18,316 | INFO     | did not find any defunct processes belonging to 3904
[2025-06-04 05:58:30] 2025-06-04 09:58:18,316 | INFO     | ready for new job
[2025-06-04 05:58:30] 2025-06-04 09:58:18,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:58:30] 2025-06-04 09:58:18,317 | INFO     | **************************************
[2025-06-04 05:58:30] 2025-06-04 09:58:18,317 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:58:30] 2025-06-04 09:58:18,317 | INFO     | **************************************
[2025-06-04 05:58:30] 2025-06-04 09:58:18,318 | INFO     | 
[2025-06-04 05:58:30] 2025-06-04 09:58:18,318 | INFO     | architecture information:
[2025-06-04 05:58:30] 2025-06-04 09:58:18,319 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:58:30] 2025-06-04 09:58:18,333 | INFO     | cat /etc/os-release:
[2025-06-04 05:58:30] NAME="CentOS Linux"
[2025-06-04 05:58:30] VERSION="7 (Core)"
[2025-06-04 05:58:30] ID="centos"
[2025-06-04 05:58:30] ID_LIKE="rhel fedora"
[2025-06-04 05:58:30] VERSION_ID="7"
[2025-06-04 05:58:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:58:30] ANSI_COLOR="0;31"
[2025-06-04 05:58:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:58:30] HOME_URL="https://www.centos.org/"
[2025-06-04 05:58:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:58:30] 
[2025-06-04 05:58:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:58:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:58:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:58:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:58:30] 
[2025-06-04 05:58:30] 2025-06-04 09:58:18,333 | INFO     | **************************************
[2025-06-04 05:58:30] 2025-06-04 09:58:18,836 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:58:30] 2025-06-04 09:58:18,852 | INFO     | sufficient remaining disk space (29418848256 B)
[2025-06-04 05:58:30] 2025-06-04 09:58:18,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:58:30] 2025-06-04 09:58:18,853 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:58:30] 2025-06-04 09:58:18,853 | INFO     | update_server=False
[2025-06-04 05:58:30] 2025-06-04 09:58:18,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:58:30] 2025-06-04 09:58:18,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:58:30] 2025-06-04 09:58:18,883 | INFO     | all job control threads have been joined
[2025-06-04 05:58:30] 2025-06-04 09:58:19,172 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:58:30] 2025-06-04 09:58:19,191 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 05:58:30] 2025-06-04 09:58:19,191 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 05:58:30] 2025-06-04 09:58:19,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:58:30] 2025-06-04 09:58:19,191 | INFO     | will abort loop
[2025-06-04 05:58:30] 2025-06-04 09:58:19,466 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:58:30] 2025-06-04 09:58:19,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:58:30] 2025-06-04 09:58:19,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:58:30] 2025-06-04 09:58:19,693 | INFO     | all payload control threads have been joined
[2025-06-04 05:58:30] 2025-06-04 09:58:19,858 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:19,859 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:19,868 | INFO     | all data control threads have been joined
[2025-06-04 05:58:30] 2025-06-04 09:58:19,888 | INFO     | [job] control thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:20,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:58:30] 2025-06-04 09:58:20,134 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:20,197 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:20,224 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:20,225 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:20,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:20,645 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:20,698 | INFO     | [payload] control thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:20,873 | INFO     | [data] control thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:20,969 | INFO     | [job] validate thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:21,018 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:21,109 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:21,177 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:24,030 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:58:30] 2025-06-04 09:58:24,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886607206208)>', '<ExcThread(monitor, started 139885641971456)>']
[2025-06-04 05:58:30] 2025-06-04 09:58:25,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:58:30] 2025-06-04 09:58:25,498 | INFO     | [monitor] control thread has ended
[2025-06-04 05:58:30] 2025-06-04 09:58:29,789 | INFO     | all workflow threads have been joined
[2025-06-04 05:58:30] 2025-06-04 09:58:29,789 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:58:30] 2025-06-04 09:58:29,790 | INFO     | traces error code: 0
[2025-06-04 05:58:30] 2025-06-04 09:58:29,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:58:30] 2025-06-04 09:58:29,879 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:58:30] 2025-06-04 09:58:29,883 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:58:30] 2025-06-04 09:58:29,887 [wrapper] pilotpid: 29692
[2025-06-04 05:58:30] 2025-06-04 09:58:29,890 [wrapper] Pilot exit status: 0
[2025-06-04 05:58:30] 2025-06-04 09:58:29,907 [wrapper] pandaids: 6678287222
[2025-06-04 05:58:30] 2025-06-04 09:58:29,943 [wrapper] cleanup supervisor_pilot 12453 29693
[2025-06-04 05:58:30] 2025-06-04 09:58:29,947 [wrapper] Test setup, not cleaning
[2025-06-04 05:58:30] 2025-06-04 09:58:29,951 [wrapper] apfmon messages muted
[2025-06-04 05:58:30] 2025-06-04 09:58:29,955 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:58:30] 2025-06-04 09:58:29,959 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:58:30]  *** Error codes and diagnostics ***
[2025-06-04 05:58:30]     "exeErrorCode": 0,
[2025-06-04 05:58:30]     "exeErrorDiag": "",
[2025-06-04 05:58:30]     "pilotErrorCode": 0,
[2025-06-04 05:58:30]     "pilotErrorDiag": "",
[2025-06-04 05:58:30]  *** Listing of results directory ***
[2025-06-04 05:58:30] total 389712
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 05:58:30] -rwx------ 1 boincer umatlas     37140 Jun  4 00:07 runpilot2-wrapper.sh
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:07 queuedata.json
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas       100 Jun  4 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:58:30] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 04:53 run_atlas
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas       105 Jun  4 04:53 job.xml
[2025-06-04 05:58:30] -rw-r--r-- 2 boincer umatlas 215764720 Jun  4 04:53 EVNT.45006593._002078.pool.root.1
[2025-06-04 05:58:30] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:53 start_atlas.sh
[2025-06-04 05:58:30] drwxrwx--x 2 boincer umatlas      4096 Jun  4 04:53 shared
[2025-06-04 05:58:30] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 04:53 input.tar.gz
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas         0 Jun  4 04:53 boinc_lockfile
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 04:53 pandaJob.out
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas    986774 Jun  4 04:53 agis_schedconf.cvmfs.json
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas   1603667 Jun  4 04:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:58:30] drwx------ 4 boincer umatlas      4096 Jun  4 04:53 pilot3
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 05:54 init_data.xml
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas 177996962 Jun  4 05:57 HITS.45006595._051869.pool.root.1
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas        95 Jun  4 05:57 pilot_heartbeat.json
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas       530 Jun  4 05:57 boinc_task_state.xml
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas      1049 Jun  4 05:58 memory_monitor_summary.json
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas    358917 Jun  4 05:58 log.45006595._051869.job.log.tgz.1
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas      7754 Jun  4 05:58 heartbeat.json
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:58 boinc_mmap_file
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:58 wrapper_checkpoint.txt
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas      4539 Jun  4 05:58 pilotlog.txt
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas    376869 Jun  4 05:58 log.45006595._051869.job.log.1
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas       357 Jun  4 05:58 output.list
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:58 runtime_log
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas    757760 Jun  4 05:58 result.tar.gz
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas       659 Jun  4 05:58 z9INDmiaug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR6mKDmDnfCXo.diag
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 05:58 runtime_log.err
[2025-06-04 05:58:30] -rw-r--r-- 1 boincer umatlas     21806 Jun  4 05:58 stderr.txt
[2025-06-04 05:58:30] HITS file was successfully produced:
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas 177996962 Jun  4 05:57 shared/HITS.pool.root.1
[2025-06-04 05:58:30]  *** Contents of shared directory: ***
[2025-06-04 05:58:30] total 385792
[2025-06-04 05:58:30] -rw-r--r-- 2 boincer umatlas 215764720 Jun  4 04:53 ATLAS.root_0
[2025-06-04 05:58:30] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:53 start_atlas.sh
[2025-06-04 05:58:30] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 04:53 input.tar.gz
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas 177996962 Jun  4 05:57 HITS.pool.root.1
[2025-06-04 05:58:30] -rw------- 1 boincer umatlas    757760 Jun  4 05:58 result.tar.gz
05:58:31 (26103): run_atlas exited; CPU time 40680.471088
05:58:31 (26103): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN