Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:49:19 (862249): wrapper (7.7.26015): starting
19:49:19 (862249): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 19:49:19] Arguments: --nthreads 4
[2025-06-04 19:49:19] Threads: 4
[2025-06-04 19:49:19] Checking for CVMFS
[2025-06-04 19:49:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:49:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:49:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:49:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:49:19] 2.9.2.0 9870 2212 91464 146789 3 56 30443736 36864000 0 130560 0 2268841 99.993 464935 39670 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 19:49:19] CVMFS is ok
[2025-06-04 19:49:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 19:49:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 19:49:19] Further information can be found at the LHC@home message board.
[2025-06-04 19:49:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:49:19] Checking for apptainer binary...
[2025-06-04 19:49:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:49:19] Running /usr/bin/apptainer --version
[2025-06-04 19:49:20] apptainer version 1.3.6-6.1
[2025-06-04 19:49:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:49:20] atlasA139
[2025-06-04 19:49:20] apptainer works
[2025-06-04 19:49:20] Set ATHENA_PROC_NUMBER=4
[2025-06-04 19:49:20] Set ATHENA_CORE_NUMBER=4
[2025-06-04 19:49:20] Starting ATLAS job with PandaID=6678287144
[2025-06-04 19:49:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:52:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:52:33]  mtime=0
[2025-06-04 20:52:33]  protocol_id=None
[2025-06-04 20:52:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 20:52:33]  replicas=None
[2025-06-04 20:52:33]  scope=mc23_13p6TeV
[2025-06-04 20:52:33]  status=None
[2025-06-04 20:52:33]  status_code=0
[2025-06-04 20:52:33]  storage_token=
[2025-06-04 20:52:33]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678287144/log.45006595._051791.job.log.tgz.1
[2025-06-04 20:52:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/00/log.45006595._051791.job.log.tgz.1
[2025-06-04 20:52:33]  workdir=None
[2025-06-04 20:52:33] ]
[2025-06-04 20:52:33] 2025-06-04 18:52:07,619 | INFO     | transferring file log.45006595._051791.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678287144/log.45006595._051791.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 20:52:33] 2025-06-04 18:52:07,619 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678287144/log.45006595._051791.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0517
[2025-06-04 20:52:33] 2025-06-04 18:52:07,638 | INFO     | adding to output.list: log.45006595._051791.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/00/log.45006595._051791.job.log.tg
[2025-06-04 20:52:33] 2025-06-04 18:52:07,638 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 20:52:33] 2025-06-04 18:52:07,639 | INFO     | summary of transferred files:
[2025-06-04 20:52:33] 2025-06-04 18:52:07,639 | INFO     |  -- lfn=log.45006595._051791.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 20:52:33] 2025-06-04 18:52:07,639 | INFO     | stage-out finished correctly
[2025-06-04 20:52:33] 2025-06-04 18:52:08,927 | WARNING  | process 872614 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 20:52:33] 2025-06-04 18:52:08,928 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678287144/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:52:33] 2025-06-04 18:52:08,976 | INFO     | number of running child processes to parent process 872614: 1
[2025-06-04 20:52:33] 2025-06-04 18:52:08,976 | INFO     | maximum number of monitored processes: 6
[2025-06-04 20:52:33] 2025-06-04 18:52:09,105 | INFO     | PID=865969 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 20:52:33] 2025-06-04 18:52:09,265 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 20:52:33] 2025-06-04 18:52:10,408 | INFO     | job 6678287144 has state=finished
[2025-06-04 20:52:33] 2025-06-04 18:52:10,408 | INFO     | preparing for final server update for job 6678287144 in state='finished'
[2025-06-04 20:52:33] 2025-06-04 18:52:10,978 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 20:52:33] 2025-06-04 18:52:10,978 | INFO     | this job has now completed (state=finished)
[2025-06-04 20:52:33] 2025-06-04 18:52:10,978 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 20:52:33] 2025-06-04 18:52:10,978 | INFO     | log transfer has been attempted: DONE
[2025-06-04 20:52:33] 2025-06-04 18:52:10,978 | INFO     | job 6678287144 has finished - writing final server update
[2025-06-04 20:52:33] 2025-06-04 18:52:10,978 | INFO     | total number of processed events: 400 (read)
[2025-06-04 20:52:33] 2025-06-04 18:52:10,979 | INFO     | executing command: lscpu
[2025-06-04 20:52:33] 2025-06-04 18:52:11,000 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 20:52:33] 2025-06-04 18:52:11,480 | INFO     | monitor loop #290: job 0:6678287144 is in state 'finished'
[2025-06-04 20:52:33] 2025-06-04 18:52:11,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:52:33] 2025-06-04 18:52:13,982 | INFO     | monitor loop #291: job 0:6678287144 is in state 'finished'
[2025-06-04 20:52:33] 2025-06-04 18:52:13,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:52:33] 2025-06-04 18:52:14,249 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 20:52:33] 2025-06-04 18:52:14,249 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678287144/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:52:33] 2025-06-04 18:52:14,249 | INFO     | extracted standard info from prmon json
[2025-06-04 20:52:33] 2025-06-04 18:52:14,249 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:52:33] 2025-06-04 18:52:14,249 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:52:33] 2025-06-04 18:52:14,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:52:33] 2025-06-04 18:52:14,250 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:52:33] 2025-06-04 18:52:14,250 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:52:33] 2025-06-04 18:52:14,250 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 20:52:33] 2025-06-04 18:52:14,250 | INFO     | sum of deviations: -6641165465.0
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | mean x: 1749061342.0
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | mean y: 2478483.5636363635
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | -- intersect: 225232584679.6465
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | intersect: 225232584679.6465
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | chi2: 0.126867193572453
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | -- intersect: 225232584679.6465
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | current memory leak: -128.77 B/s (using 55 data points, chi2=0.13)
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | ..............................
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | . Timing measurements:
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | . get job = 0 s
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | . initial setup = 1 s
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | . payload setup = 4 s
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | . stage-in = 0 s
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | . payload execution = 3737 s
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | . stage-out = 0 s
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | . log creation = 0 s
[2025-06-04 20:52:33] 2025-06-04 18:52:14,251 | INFO     | ..............................
[2025-06-04 20:52:33] 2025-06-04 18:52:14,306 | INFO     | 
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | job summary report
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | --------------------------------------------------
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | PanDA job id: 6678287144
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | task id: 45006595
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | errors: (none)
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | pilot state: finished 
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | transexitcode: 0
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | exeerrorcode: 0
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | exeerrordiag: 
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | exitcode: 0
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | exitmsg: OK
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | cpuconsumptiontime: 14066 s
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | nevents: 400
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | neventsw: 0
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | pid: 872614
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | pgrp: 872614
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | corecount: 4
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | event service: False
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | sizes: {0: 2397345, 4: 2397551, 11: 2397579, 3745: 2423344, 3746: 2432291, 3748: 2432347, 3753: 2432645}
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | --------------------------------------------------
[2025-06-04 20:52:33] 2025-06-04 18:52:14,307 | INFO     | 
[2025-06-04 20:52:33] 2025-06-04 18:52:14,308 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 20:52:33] 2025-06-04 18:52:14,326 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | job 6678287144 has completed (purged errors)
[2025-06-04 20:52:33] 2025-06-04 18:52:14,327 | INFO     | overall cleanup function is called
[2025-06-04 20:52:33] 2025-06-04 18:52:15,334 | INFO     | --- collectZombieJob: --- 10, [872614]
[2025-06-04 20:52:33] 2025-06-04 18:52:15,334 | INFO     | zombie collector waiting for pid 872614
[2025-06-04 20:52:33] 2025-06-04 18:52:15,334 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:52:33] 2025-06-04 18:52:15,334 | INFO     | collected zombie processes
[2025-06-04 20:52:33] 2025-06-04 18:52:15,334 | INFO     | will attempt to kill all subprocesses of pid=872614
[2025-06-04 20:52:33] 2025-06-04 18:52:15,386 | INFO     | process IDs to be killed: [872614] (in reverse order)
[2025-06-04 20:52:33] 2025-06-04 18:52:15,421 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:52:33] 2025-06-04 18:52:15,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:52:33] 2025-06-04 18:52:15,423 | INFO     | did not find any defunct processes belonging to 872614
[2025-06-04 20:52:33] 2025-06-04 18:52:15,425 | INFO     | did not find any defunct processes belonging to 872614
[2025-06-04 20:52:33] 2025-06-04 18:52:15,425 | INFO     | ready for new job
[2025-06-04 20:52:33] 2025-06-04 18:52:15,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:52:33] 2025-06-04 18:52:15,426 | INFO     | **************************************
[2025-06-04 20:52:33] 2025-06-04 18:52:15,426 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:52:33] 2025-06-04 18:52:15,426 | INFO     | **************************************
[2025-06-04 20:52:33] 2025-06-04 18:52:15,426 | INFO     | 
[2025-06-04 20:52:33] 2025-06-04 18:52:15,426 | INFO     | architecture information:
[2025-06-04 20:52:33] 2025-06-04 18:52:15,427 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:52:33] 2025-06-04 18:52:15,441 | INFO     | cat /etc/os-release:
[2025-06-04 20:52:33] NAME="CentOS Linux"
[2025-06-04 20:52:33] VERSION="7 (Core)"
[2025-06-04 20:52:33] ID="centos"
[2025-06-04 20:52:33] ID_LIKE="rhel fedora"
[2025-06-04 20:52:33] VERSION_ID="7"
[2025-06-04 20:52:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:52:33] ANSI_COLOR="0;31"
[2025-06-04 20:52:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:52:33] HOME_URL="https://www.centos.org/"
[2025-06-04 20:52:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:52:33] 
[2025-06-04 20:52:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:52:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:52:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:52:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:52:33] 
[2025-06-04 20:52:33] 2025-06-04 18:52:15,441 | INFO     | **************************************
[2025-06-04 20:52:33] 2025-06-04 18:52:15,944 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 20:52:33] 2025-06-04 18:52:15,961 | INFO     | sufficient remaining disk space (326110281728 B)
[2025-06-04 20:52:33] 2025-06-04 18:52:15,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:52:33] 2025-06-04 18:52:15,961 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:52:33] 2025-06-04 18:52:15,961 | INFO     | update_server=False
[2025-06-04 20:52:33] 2025-06-04 18:52:15,961 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:52:33] 2025-06-04 18:52:15,961 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:52:33] 2025-06-04 18:52:15,961 | INFO     | aborting loop
[2025-06-04 20:52:33] 2025-06-04 18:52:15,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:52:33] 2025-06-04 18:52:15,961 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:52:33] 2025-06-04 18:52:15,962 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:52:33] 2025-06-04 18:52:15,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:52:33] 2025-06-04 18:52:15,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:52:33] 2025-06-04 18:52:15,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:52:33] 2025-06-04 18:52:15,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:52:33] 2025-06-04 18:52:16,298 | INFO     | all payload control threads have been joined
[2025-06-04 20:52:33] 2025-06-04 18:52:16,418 | INFO     | all data control threads have been joined
[2025-06-04 20:52:33] 2025-06-04 18:52:16,966 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:16,967 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:16,967 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:17,035 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:17,105 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:17,270 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:17,304 | INFO     | [payload] control thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:17,423 | INFO     | [data] control thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:17,546 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:17,631 | INFO     | all job control threads have been joined
[2025-06-04 20:52:33] 2025-06-04 18:52:17,968 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:18,104 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:18,403 | INFO     | [job] validate thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:18,432 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:18,637 | INFO     | [job] control thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:19,968 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:26,615 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:52:33] 2025-06-04 18:52:27,620 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:52:33] 2025-06-04 18:52:28,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858304542528)>', '<ExcThread(monitor, started 139857640789760)>']
[2025-06-04 20:52:33] 2025-06-04 18:52:29,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:52:33] 2025-06-04 18:52:29,030 | INFO     | [monitor] control thread has ended
[2025-06-04 20:52:33] 2025-06-04 18:52:33,215 | INFO     | all workflow threads have been joined
[2025-06-04 20:52:33] 2025-06-04 18:52:33,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:52:33] 2025-06-04 18:52:33,215 | INFO     | traces error code: 0
[2025-06-04 20:52:33] 2025-06-04 18:52:33,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:52:33] 2025-06-04 18:52:33,287 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:52:33] 2025-06-04 18:52:33,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:52:33] 2025-06-04 18:52:33,295 [wrapper] pilotpid: 865969
[2025-06-04 20:52:33] 2025-06-04 18:52:33,298 [wrapper] Pilot exit status: 0
[2025-06-04 20:52:33] 2025-06-04 18:52:33,310 [wrapper] pandaids: 6678287144
[2025-06-04 20:52:33] 2025-06-04 18:52:33,333 [wrapper] cleanup supervisor_pilot  882593 865970
[2025-06-04 20:52:33] 2025-06-04 18:52:33,337 [wrapper] Test setup, not cleaning
[2025-06-04 20:52:33] 2025-06-04 18:52:33,340 [wrapper] apfmon messages muted
[2025-06-04 20:52:33] 2025-06-04 18:52:33,344 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:52:33] 2025-06-04 18:52:33,348 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:52:33]  *** Error codes and diagnostics ***
[2025-06-04 20:52:33]     "exeErrorCode": 0,
[2025-06-04 20:52:33]     "exeErrorDiag": "",
[2025-06-04 20:52:33]     "pilotErrorCode": 0,
[2025-06-04 20:52:33]     "pilotErrorDiag": "",
[2025-06-04 20:52:33]  *** Listing of results directory ***
[2025-06-04 20:52:33] total 383504
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:29 pilot3.tar.gz
[2025-06-04 20:52:33] -rwx------ 1 boinc boinc     37140 Jun  4 05:49 runpilot2-wrapper.sh
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:49 queuedata.json
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc       100 Jun  4 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:52:33] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 19:49 run_atlas
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc       105 Jun  4 19:49 job.xml
[2025-06-04 20:52:33] -rw-r--r-- 2 boinc boinc 213731430 Jun  4 19:49 EVNT.45006593._002075.pool.root.1
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc      6856 Jun  4 19:49 init_data.xml
[2025-06-04 20:52:33] drwxrwx--x 2 boinc boinc      4096 Jun  4 19:49 shared
[2025-06-04 20:52:33] -rw-r--r-- 2 boinc boinc    508876 Jun  4 19:49 input.tar.gz
[2025-06-04 20:52:33] -rw-r--r-- 2 boinc boinc     15093 Jun  4 19:49 start_atlas.sh
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc         0 Jun  4 19:49 boinc_lockfile
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc      2525 Jun  4 19:49 pandaJob.out
[2025-06-04 20:52:33] -rw------- 1 boinc boinc    990984 Jun  4 19:49 agis_schedconf.cvmfs.json
[2025-06-04 20:52:33] -rw------- 1 boinc boinc   1598969 Jun  4 19:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:52:33] drwx------ 4 boinc boinc      4096 Jun  4 19:49 pilot3
[2025-06-04 20:52:33] -rw------- 1 boinc boinc 173924238 Jun  4 20:51 HITS.45006595._051791.pool.root.1
[2025-06-04 20:52:33] -rw------- 1 boinc boinc        95 Jun  4 20:51 pilot_heartbeat.json
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc       530 Jun  4 20:51 boinc_task_state.xml
[2025-06-04 20:52:33] -rw------- 1 boinc boinc      1033 Jun  4 20:52 memory_monitor_summary.json
[2025-06-04 20:52:33] -rw------- 1 boinc boinc    231728 Jun  4 20:52 log.45006595._051791.job.log.tgz.1
[2025-06-04 20:52:33] -rw------- 1 boinc boinc      7665 Jun  4 20:52 heartbeat.json
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc      8192 Jun  4 20:52 boinc_mmap_file
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc        27 Jun  4 20:52 wrapper_checkpoint.txt
[2025-06-04 20:52:33] -rw------- 1 boinc boinc      4552 Jun  4 20:52 pilotlog.txt
[2025-06-04 20:52:33] -rw------- 1 boinc boinc    378473 Jun  4 20:52 log.45006595._051791.job.log.1
[2025-06-04 20:52:33] -rw------- 1 boinc boinc       357 Jun  4 20:52 output.list
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc       620 Jun  4 20:52 runtime_log
[2025-06-04 20:52:33] -rw------- 1 boinc boinc    624640 Jun  4 20:52 result.tar.gz
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc      8748 Jun  4 20:52 runtime_log.err
[2025-06-04 20:52:33] -rw------- 1 boinc boinc       661 Jun  4 20:52 4zrMDmBJug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ5mKDm1MQrVn.diag
[2025-06-04 20:52:33] -rw-r--r-- 1 boinc boinc     21721 Jun  4 20:52 stderr.txt
[2025-06-04 20:52:33] HITS file was successfully produced:
[2025-06-04 20:52:33] -rw------- 1 boinc boinc 173924238 Jun  4 20:51 shared/HITS.pool.root.1
[2025-06-04 20:52:33]  *** Contents of shared directory: ***
[2025-06-04 20:52:33] total 379708
[2025-06-04 20:52:33] -rw-r--r-- 2 boinc boinc 213731430 Jun  4 19:49 ATLAS.root_0
[2025-06-04 20:52:33] -rw-r--r-- 2 boinc boinc    508876 Jun  4 19:49 input.tar.gz
[2025-06-04 20:52:33] -rw-r--r-- 2 boinc boinc     15093 Jun  4 19:49 start_atlas.sh
[2025-06-04 20:52:33] -rw------- 1 boinc boinc 173924238 Jun  4 20:51 HITS.pool.root.1
[2025-06-04 20:52:33] -rw------- 1 boinc boinc    624640 Jun  4 20:52 result.tar.gz
20:52:34 (862249): run_atlas exited; CPU time 14075.984752
20:52:34 (862249): called boinc_finish(0)

</stderr_txt>
]]>

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