Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:53:46 (9760): wrapper (7.7.26015): starting
21:53:46 (9760): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:53:46] Arguments: --nthreads 8
[2025-06-04 21:53:46] Threads: 8
[2025-06-04 21:53:46] Checking for CVMFS
[2025-06-04 21:53:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:53:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:53:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:53:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:53:48] 2.11.2.0 13342 33641 98312 146792 1 59 20561206 25165824 3135 130560 0 17390524 99.772 18476761 2008 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:53:48] CVMFS is ok
[2025-06-04 21:53:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:53:48] Checking for apptainer binary...
[2025-06-04 21:53:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:53:48] Running /usr/bin/apptainer --version
[2025-06-04 21:53:48] apptainer version 1.3.2-1.el7
[2025-06-04 21:53:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:24:23] cg-vwn278.simple-grid.lan
[2025-06-04 22:24:23] apptainer works
[2025-06-04 22:24:23] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:24:23] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:24:24] Starting ATLAS job with PandaID=6678245492
[2025-06-04 22:24:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:30:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:30:51] 2025-06-05 00:26:36,740 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:30:51] 2025-06-05 00:26:36,740 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:30:51] 2025-06-05 00:26:36,740 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:30:51] 2025-06-05 00:26:36,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:30:51] 2025-06-05 00:26:36,745 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:30:51] 2025-06-05 00:26:36,746 | INFO     | sum of square deviations: 3579276412.5
[2025-06-05 02:30:51] 2025-06-05 00:26:36,748 | INFO     | sum of deviations: 64637643743.99999
[2025-06-05 02:30:51] 2025-06-05 00:26:36,748 | INFO     | mean x: 1749076219.5
[2025-06-05 02:30:51] 2025-06-05 00:26:36,748 | INFO     | mean y: 2435410.946902655
[2025-06-05 02:30:51] 2025-06-05 00:26:36,749 | INFO     | -- intersect: -31583883310.4333
[2025-06-05 02:30:51] 2025-06-05 00:26:36,749 | INFO     | intersect: -31583883310.4333
[2025-06-05 02:30:51] 2025-06-05 00:26:36,749 | INFO     | chi2: 7.148845170702404
[2025-06-05 02:30:51] 2025-06-05 00:26:36,750 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 02:30:51] 2025-06-05 00:26:36,759 | INFO     | sum of deviations: 78042207693.99998
[2025-06-05 02:30:51] 2025-06-05 00:26:36,759 | INFO     | mean x: 1749076067.0
[2025-06-05 02:30:51] 2025-06-05 00:26:36,759 | INFO     | mean y: 2444033.7330316743
[2025-06-05 02:30:51] 2025-06-05 00:26:36,759 | INFO     | -- intersect: -40781750605.45967
[2025-06-05 02:30:51] 2025-06-05 00:26:36,759 | INFO     | intersect: -40781750605.45967
[2025-06-05 02:30:51] 2025-06-05 00:26:36,760 | INFO     | chi2: 6.44864691902155
[2025-06-05 02:30:51] 2025-06-05 00:26:36,760 | INFO     | current chi2=6.44864691902155 (change=9.794564506032753 %)
[2025-06-05 02:30:51] 2025-06-05 00:26:36,760 | INFO     | right removable region: 220
[2025-06-05 02:30:51] 2025-06-05 00:26:36,760 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 02:30:51] 2025-06-05 00:26:36,762 | INFO     | sum of deviations: -13212019097.000006
[2025-06-05 02:30:51] 2025-06-05 00:26:36,762 | INFO     | mean x: 1749076372.0
[2025-06-05 02:30:51] 2025-06-05 00:26:36,762 | INFO     | mean y: 2486461.4570135744
[2025-06-05 02:30:51] 2025-06-05 00:26:36,763 | INFO     | -- intersect: 6906976586.897179
[2025-06-05 02:30:51] 2025-06-05 00:26:36,763 | INFO     | intersect: 6906976586.897179
[2025-06-05 02:30:51] 2025-06-05 00:26:36,763 | INFO     | chi2: 2.2895205274669275
[2025-06-05 02:30:51] 2025-06-05 00:26:36,763 | INFO     | current chi2=2.2895205274669275 (change=67.97356114453417 %)
[2025-06-05 02:30:51] 2025-06-05 00:26:36,764 | INFO     | sum of square deviations: 3124858590.0
[2025-06-05 02:30:51] 2025-06-05 00:26:36,765 | INFO     | sum of deviations: -49575676823.5
[2025-06-05 02:30:51] 2025-06-05 00:26:36,766 | INFO     | mean x: 1749076524.5
[2025-06-05 02:30:51] 2025-06-05 00:26:36,766 | INFO     | mean y: 2511261.060185185
[2025-06-05 02:30:51] 2025-06-05 00:26:36,766 | INFO     | -- intersect: 27751495741.725143
[2025-06-05 02:30:51] 2025-06-05 00:26:36,766 | INFO     | intersect: 27751495741.725143
[2025-06-05 02:30:51] 2025-06-05 00:26:36,766 | INFO     | chi2: 0.980394214101834
[2025-06-05 02:30:51] 2025-06-05 00:26:36,767 | INFO     | current chi2=0.980394214101834 (change=57.17905987999507 %)
[2025-06-05 02:30:51] 2025-06-05 00:26:36,767 | INFO     | sum of square deviations: 2912836010.0
[2025-06-05 02:30:51] 2025-06-05 00:26:36,769 | INFO     | sum of deviations: -47185615358.0
[2025-06-05 02:30:51] 2025-06-05 00:26:36,769 | INFO     | mean x: 1749076677.0
[2025-06-05 02:30:51] 2025-06-05 00:26:36,769 | INFO     | mean y: 2509502.8246445497
[2025-06-05 02:30:51] 2025-06-05 00:26:36,769 | INFO     | -- intersect: 28336153768.837
[2025-06-05 02:30:51] 2025-06-05 00:26:36,769 | INFO     | intersect: 28336153768.837
[2025-06-05 02:30:51] 2025-06-05 00:26:36,770 | INFO     | chi2: 0.9658236411253177
[2025-06-05 02:30:51] 2025-06-05 00:26:36,770 | INFO     | current chi2=0.9658236411253177 (change=1.4861953249963655 %)
[2025-06-05 02:30:51] 2025-06-05 00:26:36,770 | INFO     | left removable region: 30
[2025-06-05 02:30:51] 2025-06-05 00:26:36,771 | INFO     | sum of square deviations: 2126802667.5
[2025-06-05 02:30:51] 2025-06-05 00:26:36,772 | INFO     | sum of deviations: -10698609623.000002
[2025-06-05 02:30:51] 2025-06-05 00:26:36,772 | INFO     | mean x: 1749076951.5
[2025-06-05 02:30:51] 2025-06-05 00:26:36,772 | INFO     | mean y: 2502599.2421052633
[2025-06-05 02:30:51] 2025-06-05 00:26:36,772 | INFO     | -- intersect: 8801011172.997883
[2025-06-05 02:30:51] 2025-06-05 00:26:36,772 | INFO     | intersect: 8801011172.997883
[2025-06-05 02:30:51] 2025-06-05 00:26:36,773 | INFO     | chi2: 0.09971163214446647
[2025-06-05 02:30:51] 2025-06-05 00:26:36,773 | INFO     | -- intersect: 8801011172.997883
[2025-06-05 02:30:51] 2025-06-05 00:26:36,773 | INFO     | current memory leak: -5.03 B/s (using 190 data points, chi2=0.10)
[2025-06-05 02:30:51] 2025-06-05 00:26:36,781 | INFO     | ..............................
[2025-06-05 02:30:51] 2025-06-05 00:26:36,781 | INFO     | . Timing measurements:
[2025-06-05 02:30:51] 2025-06-05 00:26:36,781 | INFO     | . get job = 0 s
[2025-06-05 02:30:51] 2025-06-05 00:26:36,782 | INFO     | . initial setup = 10 s
[2025-06-05 02:30:51] 2025-06-05 00:26:36,782 | INFO     | . payload setup = 176 s
[2025-06-05 02:30:51] 2025-06-05 00:26:36,782 | INFO     | . stage-in = 0 s
[2025-06-05 02:30:51] 2025-06-05 00:26:36,782 | INFO     | . payload execution = 13885 s
[2025-06-05 02:30:51] 2025-06-05 00:26:36,782 | INFO     | . stage-out = 4 s
[2025-06-05 02:30:51] 2025-06-05 00:26:36,782 | INFO     | . log creation = 1 s
[2025-06-05 02:30:51] 2025-06-05 00:26:36,782 | INFO     | ..............................
[2025-06-05 02:30:51] 2025-06-05 00:26:37,370 | INFO     | 
[2025-06-05 02:30:51] 2025-06-05 00:26:37,370 | INFO     | job summary report
[2025-06-05 02:30:51] 2025-06-05 00:26:37,370 | INFO     | --------------------------------------------------
[2025-06-05 02:30:51] 2025-06-05 00:26:37,370 | INFO     | PanDA job id: 6678245492
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | task id: 45006595
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | errors: (none)
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | pilot state: finished 
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | transexitcode: 0
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | exeerrorcode: 0
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | exeerrordiag: 
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | exitcode: 0
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | exitmsg: OK
[2025-06-05 02:30:51] 2025-06-05 00:26:37,371 | INFO     | cpuconsumptiontime: 51185 s
[2025-06-05 02:30:51] 2025-06-05 00:26:37,372 | INFO     | nevents: 400
[2025-06-05 02:30:51] 2025-06-05 00:26:37,372 | INFO     | neventsw: 0
[2025-06-05 02:30:51] 2025-06-05 00:26:37,372 | INFO     | pid: 5809
[2025-06-05 02:30:51] 2025-06-05 00:26:37,372 | INFO     | pgrp: 5809
[2025-06-05 02:30:51] 2025-06-05 00:26:37,372 | INFO     | corecount: 8
[2025-06-05 02:30:51] 2025-06-05 00:26:37,372 | INFO     | event service: False
[2025-06-05 02:30:51] 2025-06-05 00:26:37,372 | INFO     | sizes: {0: 2397115, 1: 2397370, 12: 2397370, 23: 2397398, 34: 2397426, 44: 2397454, 55: 2397610, 66: 2397638, 77: 2397666, 87: 2397956, 14065: 2427615, 14066: 2427
[2025-06-05 02:30:51] 2025-06-05 00:26:37,372 | INFO     | --------------------------------------------------
[2025-06-05 02:30:51] 2025-06-05 00:26:37,372 | INFO     | 
[2025-06-05 02:30:51] 2025-06-05 00:26:37,373 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 02:30:51] 2025-06-05 00:26:37,733 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,734 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,734 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,734 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,734 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,734 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,734 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,734 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:30:51] 2025-06-05 00:26:37,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:30:51] 2025-06-05 00:26:37,736 | INFO     | job 6678245492 has completed (purged errors)
[2025-06-05 02:30:51] 2025-06-05 00:26:37,736 | INFO     | overall cleanup function is called
[2025-06-05 02:30:51] 2025-06-05 00:26:38,745 | INFO     | --- collectZombieJob: --- 10, [5809]
[2025-06-05 02:30:51] 2025-06-05 00:26:38,745 | INFO     | zombie collector waiting for pid 5809
[2025-06-05 02:30:51] 2025-06-05 00:26:38,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:30:51] 2025-06-05 00:26:38,746 | INFO     | collected zombie processes
[2025-06-05 02:30:51] 2025-06-05 00:26:38,746 | INFO     | will attempt to kill all subprocesses of pid=5809
[2025-06-05 02:30:51] 2025-06-05 00:26:38,869 | INFO     | process IDs to be killed: [5809] (in reverse order)
[2025-06-05 02:30:51] 2025-06-05 00:26:39,769 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:30:51] 2025-06-05 00:26:39,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:30:51] 2025-06-05 00:26:39,785 | INFO     | did not find any defunct processes belonging to 5809
[2025-06-05 02:30:51] 2025-06-05 00:26:39,788 | INFO     | did not find any defunct processes belonging to 5809
[2025-06-05 02:30:51] 2025-06-05 00:26:39,789 | INFO     | ready for new job
[2025-06-05 02:30:51] 2025-06-05 00:26:39,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:30:51] 2025-06-05 00:26:39,791 | INFO     | **************************************
[2025-06-05 02:30:51] 2025-06-05 00:26:39,791 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:30:51] 2025-06-05 00:26:39,791 | INFO     | **************************************
[2025-06-05 02:30:51] 2025-06-05 00:26:39,791 | INFO     | 
[2025-06-05 02:30:51] 2025-06-05 00:26:39,792 | INFO     | pilot is running in a VM
[2025-06-05 02:30:51] 2025-06-05 00:26:39,792 | INFO     | architecture information:
[2025-06-05 02:30:51] 2025-06-05 00:26:39,804 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:30:51] 2025-06-05 00:26:40,123 | INFO     | cat /etc/os-release:
[2025-06-05 02:30:51] NAME="CentOS Linux"
[2025-06-05 02:30:51] VERSION="7 (Core)"
[2025-06-05 02:30:51] ID="centos"
[2025-06-05 02:30:51] ID_LIKE="rhel fedora"
[2025-06-05 02:30:51] VERSION_ID="7"
[2025-06-05 02:30:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:30:51] ANSI_COLOR="0;31"
[2025-06-05 02:30:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:30:51] HOME_URL="https://www.centos.org/"
[2025-06-05 02:30:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:30:51] 
[2025-06-05 02:30:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:30:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:30:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:30:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:30:51] 
[2025-06-05 02:30:51] 2025-06-05 00:26:40,124 | INFO     | **************************************
[2025-06-05 02:30:51] 2025-06-05 00:26:40,627 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 02:30:51] 2025-06-05 00:26:40,854 | INFO     | sufficient remaining disk space (497037606912 B)
[2025-06-05 02:30:51] 2025-06-05 00:26:40,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:30:51] 2025-06-05 00:26:40,855 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:30:51] 2025-06-05 00:26:40,855 | INFO     | update_server=False
[2025-06-05 02:30:51] 2025-06-05 00:26:40,855 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:30:51] 2025-06-05 00:26:40,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:30:51] 2025-06-05 00:26:40,862 | INFO     | aborting loop
[2025-06-05 02:30:51] 2025-06-05 00:26:40,974 | INFO     | all data control threads have been joined
[2025-06-05 02:30:51] 2025-06-05 00:26:41,464 | INFO     | PID=31578 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 02:30:51] 2025-06-05 00:26:41,464 | INFO     | .. there are 9 such processes running
[2025-06-05 02:30:51] 2025-06-05 00:26:41,465 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:30:51] 2025-06-05 00:26:41,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:30:51] 2025-06-05 00:26:41,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:30:51] 2025-06-05 00:26:41,699 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:30:51] 2025-06-05 00:26:41,861 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:41,868 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:41,880 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:41,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:30:51] 2025-06-05 00:26:41,980 | INFO     | [data] control thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:42,089 | INFO     | all payload control threads have been joined
[2025-06-05 02:30:51] 2025-06-05 00:26:42,173 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:42,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:30:51] 2025-06-05 00:26:42,370 | INFO     | all job control threads have been joined
[2025-06-05 02:30:51] 2025-06-05 00:26:42,412 | INFO     | [job] validate thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:42,434 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:42,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:42,781 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:42,911 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:42,933 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:43,095 | INFO     | [payload] control thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:43,171 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:43,376 | INFO     | [job] control thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:43,706 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:46,189 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:30:51] 2025-06-05 00:26:47,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045635835712)>', '<ExcThread(monitor, started 140045042308864)>']
[2025-06-05 02:30:51] 2025-06-05 00:26:48,508 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:30:51] 2025-06-05 00:26:48,508 | INFO     | [monitor] control thread has ended
[2025-06-05 02:30:51] 2025-06-05 00:26:52,755 | INFO     | all workflow threads have been joined
[2025-06-05 02:30:51] 2025-06-05 00:26:52,755 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:30:51] 2025-06-05 00:26:52,756 | INFO     | traces error code: 0
[2025-06-05 02:30:51] 2025-06-05 00:26:52,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:30:51] 2025-06-05 00:26:53,157 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:30:51] 2025-06-05 00:26:53,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:30:51] 2025-06-05 00:26:53,292 [wrapper] pilotpid: 31578
[2025-06-05 02:30:51] 2025-06-05 00:26:53,380 [wrapper] Pilot exit status: 0
[2025-06-05 02:30:51] 2025-06-05 00:26:53,757 [wrapper] pandaids: 6678245492
[2025-06-05 02:30:51] 2025-06-05 00:26:54,452 [wrapper] cleanup supervisor_pilot 15299 31579
[2025-06-05 02:30:51] 2025-06-05 00:26:54,540 [wrapper] Test setup, not cleaning
[2025-06-05 02:30:51] 2025-06-05 00:26:54,660 [wrapper] apfmon messages muted
[2025-06-05 02:30:51] 2025-06-05 00:26:54,719 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:30:51] 2025-06-05 00:26:54,833 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:30:51]  *** Error codes and diagnostics ***
[2025-06-05 02:30:51]     "exeErrorCode": 0,
[2025-06-05 02:30:51]     "exeErrorDiag": "",
[2025-06-05 02:30:51]     "pilotErrorCode": 0,
[2025-06-05 02:30:51]     "pilotErrorDiag": "",
[2025-06-05 02:30:51]  *** Listing of results directory ***
[2025-06-05 02:30:51] total 391428
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc    495897 Jun  4 02:59 pilot3.tar.gz
[2025-06-05 02:30:51] -rwx------. 1 boinc boinc     37140 Jun  4 03:06 runpilot2-wrapper.sh
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc      5111 Jun  4 03:06 queuedata.json
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:30:51] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:53 run_atlas
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:53 job.xml
[2025-06-05 02:30:51] -rw-r--r--. 2 boinc boinc 214121118 Jun  4 21:53 EVNT.45006593._001992.pool.root.1
[2025-06-05 02:30:51] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:53 start_atlas.sh
[2025-06-05 02:30:51] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:53 shared
[2025-06-05 02:30:51] -rw-r--r--. 2 boinc boinc    508881 Jun  4 21:53 input.tar.gz
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc      6391 Jun  4 21:53 init_data.xml
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:53 boinc_lockfile
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc      2525 Jun  4 22:24 pandaJob.out
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc    987032 Jun  4 22:27 agis_schedconf.cvmfs.json
[2025-06-05 02:30:51] drwx------. 4 boinc boinc      4096 Jun  4 22:27 pilot3
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc 179671455 Jun  5 02:23 HITS.45006595._049691.pool.root.1
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc       531 Jun  5 02:24 boinc_task_state.xml
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc      1014 Jun  5 02:24 memory_monitor_summary.json
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc   1598969 Jun  5 02:25 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc    393128 Jun  5 02:25 log.45006595._049691.job.log.tgz.1
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc        95 Jun  5 02:26 pilot_heartbeat.json
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc      7689 Jun  5 02:26 heartbeat.json
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc      4808 Jun  5 02:26 pilotlog.txt
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc   1212104 Jun  5 02:26 log.45006595._049691.job.log.1
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc       357 Jun  5 02:26 output.list
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc       620 Jun  5 02:26 runtime_log
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc   1628160 Jun  5 02:26 result.tar.gz
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc       657 Jun  5 02:26 TaiKDmDlrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqRaKDmoU9URm.diag
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc      8659 Jun  5 02:26 runtime_log.err
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc      8192 Jun  5 02:30 boinc_mmap_file
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc        28 Jun  5 02:30 wrapper_checkpoint.txt
[2025-06-05 02:30:51] -rw-r--r--. 1 boinc boinc     20567 Jun  5 02:30 stderr.txt
[2025-06-05 02:30:51] HITS file was successfully produced:
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc 179671455 Jun  5 02:23 shared/HITS.pool.root.1
[2025-06-05 02:30:51]  *** Contents of shared directory: ***
[2025-06-05 02:30:51] total 386676
[2025-06-05 02:30:51] -rw-r--r--. 2 boinc boinc 214121118 Jun  4 21:53 ATLAS.root_0
[2025-06-05 02:30:51] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:53 start_atlas.sh
[2025-06-05 02:30:51] -rw-r--r--. 2 boinc boinc    508881 Jun  4 21:53 input.tar.gz
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc 179671455 Jun  5 02:23 HITS.pool.root.1
[2025-06-05 02:30:51] -rw-------. 1 boinc boinc   1628160 Jun  5 02:26 result.tar.gz
02:30:53 (9760): run_atlas exited; CPU time 51383.942454
02:30:53 (9760): called boinc_finish(0)

</stderr_txt>
]]>

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