Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:08:51 (3782782): wrapper (7.7.26015): starting
13:08:51 (3782782): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 13:08:51] Arguments: --nthreads 4
[2025-06-05 13:08:51] Threads: 4
[2025-06-05 13:08:51] Checking for CVMFS
[2025-06-05 13:08:51] No cvmfs_config command found, will try listing directly
[2025-06-05 13:08:51] CVMFS is ok
[2025-06-05 13:08:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:08:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:08:51] Further information can be found at the LHC@home message board.
[2025-06-05 13:08:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:08:51] Checking for apptainer binary...
[2025-06-05 13:08:51] which: no apptainer in ((null))
[2025-06-05 13:08:51] apptainer is not installed, using version from CVMFS
[2025-06-05 13:08:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:08:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-06-05 13:08:51] apptainer works
[2025-06-05 13:08:51] Set ATHENA_PROC_NUMBER=4
[2025-06-05 13:08:51] Set ATHENA_CORE_NUMBER=4
[2025-06-05 13:08:51] Starting ATLAS job with PandaID=6678244597
[2025-06-05 13:08:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:03:31]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:03:31] 2025-06-05 14:01:05,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,414 | INFO     | monitor loop #770: job 0:6678244597 is in state 'finished'
[2025-06-05 16:03:31] 2025-06-05 14:01:08,414 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,676 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 16:03:31] 2025-06-05 14:01:08,677 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6678244597/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,677 | INFO     | extracted standard info from prmon json
[2025-06-05 16:03:31] 2025-06-05 14:01:08,678 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:03:31] 2025-06-05 14:01:08,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:03:31] 2025-06-05 14:01:08,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:03:31] 2025-06-05 14:01:08,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:03:31] 2025-06-05 14:01:08,682 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:03:31] 2025-06-05 14:01:08,683 | INFO     | sum of square deviations: 1496660620.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,684 | INFO     | sum of deviations: -4386137900.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,684 | INFO     | mean x: 1749126889.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,684 | INFO     | mean y: 2360586.325443787
[2025-06-05 16:03:31] 2025-06-05 14:01:08,684 | INFO     | -- intersect: 5128380231.147791
[2025-06-05 16:03:31] 2025-06-05 14:01:08,684 | INFO     | intersect: 5128380231.147791
[2025-06-05 16:03:31] 2025-06-05 14:01:08,685 | INFO     | chi2: 1.8010836581968317
[2025-06-05 16:03:31] 2025-06-05 14:01:08,685 | INFO     | sum of square deviations: 1367709365.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,686 | INFO     | sum of deviations: -4261947329.000001
[2025-06-05 16:03:31] 2025-06-05 14:01:08,686 | INFO     | mean x: 1749126736.5
[2025-06-05 16:03:31] 2025-06-05 14:01:08,687 | INFO     | mean y: 2360733.3048780486
[2025-06-05 16:03:31] 2025-06-05 14:01:08,687 | INFO     | -- intersect: 5452850591.366693
[2025-06-05 16:03:31] 2025-06-05 14:01:08,687 | INFO     | intersect: 5452850591.366693
[2025-06-05 16:03:31] 2025-06-05 14:01:08,687 | INFO     | chi2: 1.8001088125740594
[2025-06-05 16:03:31] 2025-06-05 14:01:08,687 | INFO     | current chi2=1.8001088125740594 (change=0.05412550485013306 %)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,687 | INFO     | right removable region: 163
[2025-06-05 16:03:31] 2025-06-05 14:01:08,688 | INFO     | sum of square deviations: 1367709365.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,689 | INFO     | sum of deviations: -28759983601.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,689 | INFO     | mean x: 1749127041.5
[2025-06-05 16:03:31] 2025-06-05 14:01:08,689 | INFO     | mean y: 2389019.463414634
[2025-06-05 16:03:31] 2025-06-05 14:01:08,689 | INFO     | -- intersect: 36782765257.95298
[2025-06-05 16:03:31] 2025-06-05 14:01:08,689 | INFO     | intersect: 36782765257.95298
[2025-06-05 16:03:31] 2025-06-05 14:01:08,689 | INFO     | chi2: 0.2874945813028068
[2025-06-05 16:03:31] 2025-06-05 14:01:08,690 | INFO     | current chi2=0.2874945813028068 (change=84.03768864403366 %)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,690 | INFO     | sum of square deviations: 1246386160.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,691 | INFO     | sum of deviations: -22519686590.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,691 | INFO     | mean x: 1749127194.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,691 | INFO     | mean y: 2381139.886792453
[2025-06-05 16:03:31] 2025-06-05 14:01:08,691 | INFO     | -- intersect: 31605585250.341713
[2025-06-05 16:03:31] 2025-06-05 14:01:08,691 | INFO     | intersect: 31605585250.341713
[2025-06-05 16:03:31] 2025-06-05 14:01:08,692 | INFO     | chi2: 0.26550480770398943
[2025-06-05 16:03:31] 2025-06-05 14:01:08,692 | INFO     | current chi2=0.26550480770398943 (change=7.6487610650499205 %)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,692 | INFO     | left removable region: 20
[2025-06-05 16:03:31] 2025-06-05 14:01:08,692 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,693 | INFO     | sum of deviations: -5980699676.999998
[2025-06-05 16:03:31] 2025-06-05 14:01:08,693 | INFO     | mean x: 1749127316.0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,693 | INFO     | mean y: 2358484.2517482517
[2025-06-05 16:03:31] 2025-06-05 14:01:08,693 | INFO     | -- intersect: 11539762977.985611
[2025-06-05 16:03:31] 2025-06-05 14:01:08,694 | INFO     | intersect: 11539762977.985611
[2025-06-05 16:03:31] 2025-06-05 14:01:08,694 | INFO     | chi2: 0.12709746881120093
[2025-06-05 16:03:31] 2025-06-05 14:01:08,694 | INFO     | -- intersect: 11539762977.985611
[2025-06-05 16:03:31] 2025-06-05 14:01:08,694 | INFO     | current memory leak: -6.60 B/s (using 143 data points, chi2=0.13)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,695 | INFO     | ..............................
[2025-06-05 16:03:31] 2025-06-05 14:01:08,695 | INFO     | . Timing measurements:
[2025-06-05 16:03:31] 2025-06-05 14:01:08,695 | INFO     | . get job = 0 s
[2025-06-05 16:03:31] 2025-06-05 14:01:08,695 | INFO     | . initial setup = 1 s
[2025-06-05 16:03:31] 2025-06-05 14:01:08,695 | INFO     | . payload setup = 6 s
[2025-06-05 16:03:31] 2025-06-05 14:01:08,695 | INFO     | . stage-in = 0 s
[2025-06-05 16:03:31] 2025-06-05 14:01:08,695 | INFO     | . payload execution = 10293 s
[2025-06-05 16:03:31] 2025-06-05 14:01:08,695 | INFO     | . stage-out = 0 s
[2025-06-05 16:03:31] 2025-06-05 14:01:08,696 | INFO     | . log creation = 0 s
[2025-06-05 16:03:31] 2025-06-05 14:01:08,696 | INFO     | ..............................
[2025-06-05 16:03:31] 2025-06-05 14:01:08,805 | INFO     | 
[2025-06-05 16:03:31] 2025-06-05 14:01:08,805 | INFO     | job summary report
[2025-06-05 16:03:31] 2025-06-05 14:01:08,805 | INFO     | --------------------------------------------------
[2025-06-05 16:03:31] 2025-06-05 14:01:08,805 | INFO     | PanDA job id: 6678244597
[2025-06-05 16:03:31] 2025-06-05 14:01:08,805 | INFO     | task id: 45006595
[2025-06-05 16:03:31] 2025-06-05 14:01:08,805 | INFO     | errors: (none)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | pilot state: finished 
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | transexitcode: 0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | exeerrorcode: 0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | exeerrordiag: 
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | exitcode: 0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | exitmsg: OK
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | cpuconsumptiontime: 39278 s
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | nevents: 400
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | neventsw: 0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | pid: 3793468
[2025-06-05 16:03:31] 2025-06-05 14:01:08,806 | INFO     | pgrp: 3793468
[2025-06-05 16:03:31] 2025-06-05 14:01:08,807 | INFO     | corecount: 4
[2025-06-05 16:03:31] 2025-06-05 14:01:08,807 | INFO     | event service: False
[2025-06-05 16:03:31] 2025-06-05 14:01:08,807 | INFO     | sizes: {0: 2397182, 1: 2397381, 4: 2397587, 11: 2397615, 10303: 2426213, 10304: 2435176, 10307: 2435360, 10314: 2435530}
[2025-06-05 16:03:31] 2025-06-05 14:01:08,807 | INFO     | --------------------------------------------------
[2025-06-05 16:03:31] 2025-06-05 14:01:08,807 | INFO     | 
[2025-06-05 16:03:31] 2025-06-05 14:01:08,807 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-06-05 16:03:31] 2025-06-05 14:01:08,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,825 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,825 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,825 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,825 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:03:31] 2025-06-05 14:01:08,827 | INFO     | job 6678244597 has completed (purged errors)
[2025-06-05 16:03:31] 2025-06-05 14:01:08,827 | INFO     | overall cleanup function is called
[2025-06-05 16:03:31] 2025-06-05 14:01:09,835 | INFO     | --- collectZombieJob: --- 10, [3793468]
[2025-06-05 16:03:31] 2025-06-05 14:01:09,835 | INFO     | zombie collector waiting for pid 3793468
[2025-06-05 16:03:31] 2025-06-05 14:01:09,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:03:31] 2025-06-05 14:01:09,835 | INFO     | collected zombie processes
[2025-06-05 16:03:31] 2025-06-05 14:01:09,836 | INFO     | will attempt to kill all subprocesses of pid=3793468
[2025-06-05 16:03:31] 2025-06-05 14:01:10,067 | INFO     | process IDs to be killed: [3793468] (in reverse order)
[2025-06-05 16:03:31] 2025-06-05 14:01:10,131 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:03:31] 2025-06-05 14:01:10,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:03:31] 2025-06-05 14:01:10,138 | INFO     | did not find any defunct processes belonging to 3793468
[2025-06-05 16:03:31] 2025-06-05 14:01:10,145 | INFO     | did not find any defunct processes belonging to 3793468
[2025-06-05 16:03:31] 2025-06-05 14:01:10,145 | INFO     | ready for new job
[2025-06-05 16:03:31] 2025-06-05 14:01:10,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:03:31] 2025-06-05 14:01:10,147 | INFO     | **************************************
[2025-06-05 16:03:31] 2025-06-05 14:01:10,147 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:03:31] 2025-06-05 14:01:10,148 | INFO     | **************************************
[2025-06-05 16:03:31] 2025-06-05 14:01:10,148 | INFO     | 
[2025-06-05 16:03:31] 2025-06-05 14:01:10,150 | INFO     | architecture information:
[2025-06-05 16:03:31] 2025-06-05 14:01:10,150 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:03:31] 2025-06-05 14:01:10,162 | INFO     | cat /etc/os-release:
[2025-06-05 16:03:31] NAME="CentOS Linux"
[2025-06-05 16:03:31] VERSION="7 (Core)"
[2025-06-05 16:03:31] ID="centos"
[2025-06-05 16:03:31] ID_LIKE="rhel fedora"
[2025-06-05 16:03:31] VERSION_ID="7"
[2025-06-05 16:03:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:03:31] ANSI_COLOR="0;31"
[2025-06-05 16:03:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:03:31] HOME_URL="https://www.centos.org/"
[2025-06-05 16:03:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:03:31] 
[2025-06-05 16:03:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:03:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:03:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:03:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:03:31] 
[2025-06-05 16:03:31] 2025-06-05 14:01:10,162 | INFO     | **************************************
[2025-06-05 16:03:31] 2025-06-05 14:01:10,665 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-06-05 16:03:31] 2025-06-05 14:01:10,679 | INFO     | sufficient remaining disk space (3463900561408 B)
[2025-06-05 16:03:31] 2025-06-05 14:01:10,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:03:31] 2025-06-05 14:01:10,680 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:03:31] 2025-06-05 14:01:10,680 | INFO     | update_server=False
[2025-06-05 16:03:31] 2025-06-05 14:01:10,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:03:31] 2025-06-05 14:01:10,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:03:31] 2025-06-05 14:01:10,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:03:31] 2025-06-05 14:01:10,682 | INFO     | all job control threads have been joined
[2025-06-05 16:03:31] 2025-06-05 14:01:10,690 | INFO     | all payload control threads have been joined
[2025-06-05 16:03:31] 2025-06-05 14:01:10,917 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 16:03:31] 2025-06-05 14:01:10,918 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 16:03:31] 2025-06-05 14:01:10,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:03:31] 2025-06-05 14:01:10,918 | INFO     | will abort loop
[2025-06-05 16:03:31] 2025-06-05 14:01:10,999 | INFO     | all data control threads have been joined
[2025-06-05 16:03:31] 2025-06-05 14:01:11,685 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:11,686 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:11,687 | INFO     | [job] control thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:11,699 | INFO     | [payload] control thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:11,923 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:11,929 | INFO     | PID=3786338 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 16:03:31] 2025-06-05 14:01:11,929 | INFO     | .. there are 3 such processes running
[2025-06-05 16:03:31] 2025-06-05 14:01:11,929 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:03:31] 2025-06-05 14:01:11,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:03:31] 2025-06-05 14:01:11,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:03:31] 2025-06-05 14:01:11,936 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:12,005 | INFO     | [data] control thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:12,250 | INFO     | [job] validate thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:12,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:03:31] 2025-06-05 14:01:12,403 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:12,513 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:12,686 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:12,899 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:12,914 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:12,999 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:16,265 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:20,742 | INFO     | job.realtimelogging is not enabled
[2025-06-05 16:03:31] 2025-06-05 14:01:21,747 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:03:31] 2025-06-05 14:01:23,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22976358504256)>', '<ExcThread(monitor, started 22976051259136)>']
[2025-06-05 16:03:31] 2025-06-05 14:01:23,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:03:31] 2025-06-05 14:01:23,987 | INFO     | [monitor] control thread has ended
[2025-06-05 16:03:31] 2025-06-05 14:01:28,444 | INFO     | all workflow threads have been joined
[2025-06-05 16:03:31] 2025-06-05 14:01:28,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:03:31] 2025-06-05 14:01:28,445 | INFO     | traces error code: 0
[2025-06-05 16:03:31] 2025-06-05 14:01:28,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:03:31] 2025-06-05 14:01:28,589 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:03:31] 2025-06-05 14:01:28,591 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:03:31] 2025-06-05 14:01:28,594 [wrapper] pilotpid: 3786338
[2025-06-05 16:03:31] 2025-06-05 14:01:28,596 [wrapper] Pilot exit status: 0
[2025-06-05 16:03:31] 2025-06-05 14:01:28,604 [wrapper] pandaids: 6678244597
[2025-06-05 16:03:31] 2025-06-05 14:01:28,650 [wrapper] cleanup supervisor_pilot 3967434 3786339
[2025-06-05 16:03:31] 2025-06-05 14:01:28,652 [wrapper] Test setup, not cleaning
[2025-06-05 16:03:31] 2025-06-05 14:01:28,655 [wrapper] apfmon messages muted
[2025-06-05 16:03:31] 2025-06-05 14:01:28,658 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:03:31] 2025-06-05 14:01:28,660 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:03:31]  *** Error codes and diagnostics ***
[2025-06-05 16:03:31]     "exeErrorCode": 0,
[2025-06-05 16:03:31]     "exeErrorDiag": "",
[2025-06-05 16:03:31]     "pilotErrorCode": 0,
[2025-06-05 16:03:31]     "pilotErrorDiag": "",
[2025-06-05 16:03:31]  *** Listing of results directory ***
[2025-06-05 16:03:31] total 392908
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:59 pilot3.tar.gz
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:03 queuedata.json
[2025-06-05 16:03:31] -rwx------ 1 boinc boinc     37140 Jun  4 03:03 runpilot2-wrapper.sh
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc       100 Jun  5 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:03:31] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 13:08 run_atlas
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc       105 Jun  5 13:08 job.xml
[2025-06-05 16:03:31] -rw-r--r-- 2 boinc boinc 215259135 Jun  5 13:08 EVNT.45006593._001989.pool.root.1
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc      6418 Jun  5 13:08 init_data.xml
[2025-06-05 16:03:31] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:08 start_atlas.sh
[2025-06-05 16:03:31] drwxrwx--x 2 boinc boinc      4096 Jun  5 13:08 shared
[2025-06-05 16:03:31] -rw-r--r-- 2 boinc boinc    508883 Jun  5 13:08 input.tar.gz
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc         0 Jun  5 13:08 boinc_lockfile
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc      2525 Jun  5 13:08 pandaJob.out
[2025-06-05 16:03:31] -rw------- 1 boinc boinc    982836 Jun  5 13:08 agis_schedconf.cvmfs.json
[2025-06-05 16:03:31] -rw------- 1 boinc boinc   1598969 Jun  5 13:08 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:03:31] drwx------ 4 boinc boinc      4096 Jun  5 13:09 pilot3
[2025-06-05 16:03:31] -rw------- 1 boinc boinc 180698723 Jun  5 16:00 HITS.45006595._049602.pool.root.1
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc       528 Jun  5 16:00 boinc_task_state.xml
[2025-06-05 16:03:31] -rw------- 1 boinc boinc        95 Jun  5 16:00 pilot_heartbeat.json
[2025-06-05 16:03:31] -rw------- 1 boinc boinc      1034 Jun  5 16:00 memory_monitor_summary.json
[2025-06-05 16:03:31] -rw------- 1 boinc boinc    289330 Jun  5 16:00 log.45006595._049602.job.log.tgz.1
[2025-06-05 16:03:31] -rw------- 1 boinc boinc      7723 Jun  5 16:01 heartbeat.json
[2025-06-05 16:03:31] -rw------- 1 boinc boinc      5017 Jun  5 16:01 pilotlog.txt
[2025-06-05 16:03:31] -rw------- 1 boinc boinc    986916 Jun  5 16:01 log.45006595._049602.job.log.1
[2025-06-05 16:03:31] -rw------- 1 boinc boinc       357 Jun  5 16:01 output.list
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc       620 Jun  5 16:01 runtime_log
[2025-06-05 16:03:31] -rw------- 1 boinc boinc   1300480 Jun  5 16:01 result.tar.gz
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc      9021 Jun  5 16:01 runtime_log.err
[2025-06-05 16:03:31] -rw------- 1 boinc boinc       663 Jun  5 16:01 aOTNDmVirg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTRaKDmnbdIWo.diag
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc      8192 Jun  5 16:03 boinc_mmap_file
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc        26 Jun  5 16:03 wrapper_checkpoint.txt
[2025-06-05 16:03:31] -rw-r--r-- 1 boinc boinc     20897 Jun  5 16:03 stderr.txt
[2025-06-05 16:03:31] HITS file was successfully produced:
[2025-06-05 16:03:31] -rw------- 1 boinc boinc 180698723 Jun  5 16:00 shared/HITS.pool.root.1
[2025-06-05 16:03:31]  *** Contents of shared directory: ***
[2025-06-05 16:03:31] total 388472
[2025-06-05 16:03:31] -rw-r--r-- 2 boinc boinc 215259135 Jun  5 13:08 ATLAS.root_0
[2025-06-05 16:03:31] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:08 start_atlas.sh
[2025-06-05 16:03:31] -rw-r--r-- 2 boinc boinc    508883 Jun  5 13:08 input.tar.gz
[2025-06-05 16:03:31] -rw------- 1 boinc boinc 180698723 Jun  5 16:00 HITS.pool.root.1
[2025-06-05 16:03:31] -rw------- 1 boinc boinc   1300480 Jun  5 16:01 result.tar.gz
16:03:33 (3782782): run_atlas exited; CPU time 39577.914904
16:03:33 (3782782): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN