Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:34:33 (16240): wrapper (7.7.26015): starting
20:34:33 (16240): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 20:34:33] Arguments: --nthreads 8
[2025-06-04 20:34:33] Threads: 8
[2025-06-04 20:34:33] Checking for CVMFS
[2025-06-04 20:34:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:34:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:34:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:34:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:34:35] 2.11.2.0 13959 33756 88236 146791 1 16 21778779 25165824 4681 130560 0 18161753 99.767 19235167 3453 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 20:34:35] CVMFS is ok
[2025-06-04 20:34:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:34:35] Checking for apptainer binary...
[2025-06-04 20:34:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:34:35] Running /usr/bin/apptainer --version
[2025-06-04 20:34:35] apptainer version 1.3.2-1.el7
[2025-06-04 20:34:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:34:40] cg-vwn499.simple-grid.lan
[2025-06-04 20:34:40] apptainer works
[2025-06-04 20:34:40] Set ATHENA_PROC_NUMBER=8
[2025-06-04 20:34:40] Set ATHENA_CORE_NUMBER=8
[2025-06-04 20:34:40] Starting ATLAS job with PandaID=6678286584
[2025-06-04 20:34:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:19:25]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:19:25] 2025-06-04 22:19:13,528 | INFO     | extracted standard info from prmon json
[2025-06-05 00:19:25] 2025-06-04 22:19:13,528 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:19:25] 2025-06-04 22:19:13,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:19:25] 2025-06-04 22:19:13,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:19:25] 2025-06-04 22:19:13,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:19:25] 2025-06-04 22:19:13,533 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:19:25] 2025-06-04 22:19:13,533 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 00:19:25] 2025-06-04 22:19:13,535 | INFO     | sum of deviations: 57904627224.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,535 | INFO     | mean x: 1749069154.5
[2025-06-05 00:19:25] 2025-06-04 22:19:13,535 | INFO     | mean y: 2433482.942857143
[2025-06-05 00:19:25] 2025-06-04 22:19:13,535 | INFO     | -- intersect: -35266618880.82854
[2025-06-05 00:19:25] 2025-06-04 22:19:13,535 | INFO     | intersect: -35266618880.82854
[2025-06-05 00:19:25] 2025-06-04 22:19:13,535 | INFO     | chi2: 6.163047928312588
[2025-06-05 00:19:25] 2025-06-04 22:19:13,536 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,537 | INFO     | sum of deviations: 70058941457.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,537 | INFO     | mean x: 1749069002.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,537 | INFO     | mean y: 2442533.7463414636
[2025-06-05 00:19:25] 2025-06-04 22:19:13,538 | INFO     | -- intersect: -45868835609.693436
[2025-06-05 00:19:25] 2025-06-04 22:19:13,538 | INFO     | intersect: -45868835609.693436
[2025-06-05 00:19:25] 2025-06-04 22:19:13,538 | INFO     | chi2: 5.454846471530477
[2025-06-05 00:19:25] 2025-06-04 22:19:13,538 | INFO     | current chi2=5.454846471530477 (change=11.491091177933018 %)
[2025-06-05 00:19:25] 2025-06-04 22:19:13,538 | INFO     | right removable region: 204
[2025-06-05 00:19:25] 2025-06-04 22:19:13,539 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,540 | INFO     | sum of deviations: -13483510333.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,541 | INFO     | mean x: 1749069307.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,541 | INFO     | mean y: 2487776.907317073
[2025-06-05 00:19:25] 2025-06-04 22:19:13,541 | INFO     | -- intersect: 8830853547.587986
[2025-06-05 00:19:25] 2025-06-04 22:19:13,541 | INFO     | intersect: 8830853547.587986
[2025-06-05 00:19:25] 2025-06-04 22:19:13,541 | INFO     | chi2: 1.505532342375524
[2025-06-05 00:19:25] 2025-06-04 22:19:13,542 | INFO     | current chi2=1.505532342375524 (change=75.57162689812586 %)
[2025-06-05 00:19:25] 2025-06-04 22:19:13,542 | INFO     | sum of square deviations: 2480604650.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,543 | INFO     | sum of deviations: -33385550740.499992
[2025-06-05 00:19:25] 2025-06-04 22:19:13,543 | INFO     | mean x: 1749069459.5
[2025-06-05 00:19:25] 2025-06-04 22:19:13,544 | INFO     | mean y: 2503521.435
[2025-06-05 00:19:25] 2025-06-04 22:19:13,544 | INFO     | -- intersect: 23542589680.99136
[2025-06-05 00:19:25] 2025-06-04 22:19:13,544 | INFO     | intersect: 23542589680.99136
[2025-06-05 00:19:25] 2025-06-04 22:19:13,544 | INFO     | chi2: 0.9284819574755035
[2025-06-05 00:19:25] 2025-06-04 22:19:13,544 | INFO     | current chi2=0.9284819574755035 (change=38.32866081040238 %)
[2025-06-05 00:19:25] 2025-06-04 22:19:13,545 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,546 | INFO     | sum of deviations: -29082109412.000008
[2025-06-05 00:19:25] 2025-06-04 22:19:13,546 | INFO     | mean x: 1749069612.0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,546 | INFO     | mean y: 2499871.8666666667
[2025-06-05 00:19:25] 2025-06-04 22:19:13,546 | INFO     | -- intersect: 22126424073.960945
[2025-06-05 00:19:25] 2025-06-04 22:19:13,546 | INFO     | intersect: 22126424073.960945
[2025-06-05 00:19:25] 2025-06-04 22:19:13,547 | INFO     | chi2: 0.9138518809571299
[2025-06-05 00:19:25] 2025-06-04 22:19:13,547 | INFO     | current chi2=0.9138518809571299 (change=1.5756985260275949 %)
[2025-06-05 00:19:25] 2025-06-04 22:19:13,547 | INFO     | left removable region: 30
[2025-06-05 00:19:25] 2025-06-04 22:19:13,547 | INFO     | sum of square deviations: 1633472487.5
[2025-06-05 00:19:25] 2025-06-04 22:19:13,548 | INFO     | sum of deviations: 4573062853.5
[2025-06-05 00:19:25] 2025-06-04 22:19:13,548 | INFO     | mean x: 1749069886.5
[2025-06-05 00:19:25] 2025-06-04 22:19:13,548 | INFO     | mean y: 2491076.2816091953
[2025-06-05 00:19:25] 2025-06-04 22:19:13,548 | INFO     | -- intersect: -4894197779.721306
[2025-06-05 00:19:25] 2025-06-04 22:19:13,548 | INFO     | intersect: -4894197779.721306
[2025-06-05 00:19:25] 2025-06-04 22:19:13,549 | INFO     | chi2: 0.0003309933324747715
[2025-06-05 00:19:25] 2025-06-04 22:19:13,549 | INFO     | -- intersect: -4894197779.721306
[2025-06-05 00:19:25] 2025-06-04 22:19:13,549 | INFO     | current memory leak: 2.80 B/s (using 174 data points, chi2=0.00)
[2025-06-05 00:19:25] 2025-06-04 22:19:13,550 | INFO     | ..............................
[2025-06-05 00:19:25] 2025-06-04 22:19:13,550 | INFO     | . Timing measurements:
[2025-06-05 00:19:25] 2025-06-04 22:19:13,550 | INFO     | . get job = 0 s
[2025-06-05 00:19:25] 2025-06-04 22:19:13,550 | INFO     | . initial setup = 5 s
[2025-06-05 00:19:25] 2025-06-04 22:19:13,550 | INFO     | . payload setup = 174 s
[2025-06-05 00:19:25] 2025-06-04 22:19:13,550 | INFO     | . stage-in = 0 s
[2025-06-05 00:19:25] 2025-06-04 22:19:13,550 | INFO     | . payload execution = 12904 s
[2025-06-05 00:19:25] 2025-06-04 22:19:13,550 | INFO     | . stage-out = 2 s
[2025-06-05 00:19:25] 2025-06-04 22:19:13,550 | INFO     | . log creation = 1 s
[2025-06-05 00:19:25] 2025-06-04 22:19:13,551 | INFO     | ..............................
[2025-06-05 00:19:25] 2025-06-04 22:19:13,674 | INFO     | 
[2025-06-05 00:19:25] 2025-06-04 22:19:13,674 | INFO     | job summary report
[2025-06-05 00:19:25] 2025-06-04 22:19:13,674 | INFO     | --------------------------------------------------
[2025-06-05 00:19:25] 2025-06-04 22:19:13,674 | INFO     | PanDA job id: 6678286584
[2025-06-05 00:19:25] 2025-06-04 22:19:13,674 | INFO     | task id: 45006595
[2025-06-05 00:19:25] 2025-06-04 22:19:13,674 | INFO     | errors: (none)
[2025-06-05 00:19:25] 2025-06-04 22:19:13,674 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | pilot state: finished 
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | transexitcode: 0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | exeerrorcode: 0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | exeerrordiag: 
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | exitcode: 0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | exitmsg: OK
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | cpuconsumptiontime: 46484 s
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | nevents: 400
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | neventsw: 0
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | pid: 27929
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | pgrp: 27929
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | corecount: 8
[2025-06-05 00:19:25] 2025-06-04 22:19:13,675 | INFO     | event service: False
[2025-06-05 00:19:25] 2025-06-04 22:19:13,676 | INFO     | sizes: {0: 2397115, 1: 2397370, 2: 2397398, 13: 2397398, 23: 2397454, 34: 2397482, 45: 2397638, 55: 2397666, 66: 2397694, 77: 2397722, 88: 2397778, 95: 2398292, 98
[2025-06-05 00:19:25] 2025-06-04 22:19:13,676 | INFO     | --------------------------------------------------
[2025-06-05 00:19:25] 2025-06-04 22:19:13,676 | INFO     | 
[2025-06-05 00:19:25] 2025-06-04 22:19:13,676 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-05 00:19:25] 2025-06-04 22:19:13,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,707 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:19:25] 2025-06-04 22:19:13,707 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,707 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:19:25] 2025-06-04 22:19:13,707 | INFO     | job 6678286584 has completed (purged errors)
[2025-06-05 00:19:25] 2025-06-04 22:19:13,707 | INFO     | overall cleanup function is called
[2025-06-05 00:19:25] 2025-06-04 22:19:14,716 | INFO     | --- collectZombieJob: --- 10, [27929]
[2025-06-05 00:19:25] 2025-06-04 22:19:14,716 | INFO     | zombie collector waiting for pid 27929
[2025-06-05 00:19:25] 2025-06-04 22:19:14,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:19:25] 2025-06-04 22:19:14,717 | INFO     | collected zombie processes
[2025-06-05 00:19:25] 2025-06-04 22:19:14,717 | INFO     | will attempt to kill all subprocesses of pid=27929
[2025-06-05 00:19:25] 2025-06-04 22:19:14,811 | INFO     | process IDs to be killed: [27929] (in reverse order)
[2025-06-05 00:19:25] 2025-06-04 22:19:14,894 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:19:25] 2025-06-04 22:19:14,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:19:25] 2025-06-04 22:19:14,900 | INFO     | did not find any defunct processes belonging to 27929
[2025-06-05 00:19:25] 2025-06-04 22:19:14,903 | INFO     | did not find any defunct processes belonging to 27929
[2025-06-05 00:19:25] 2025-06-04 22:19:14,903 | INFO     | ready for new job
[2025-06-05 00:19:25] 2025-06-04 22:19:14,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:19:25] 2025-06-04 22:19:14,906 | INFO     | **************************************
[2025-06-05 00:19:25] 2025-06-04 22:19:14,906 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:19:25] 2025-06-04 22:19:14,906 | INFO     | **************************************
[2025-06-05 00:19:25] 2025-06-04 22:19:14,906 | INFO     | 
[2025-06-05 00:19:25] 2025-06-04 22:19:14,907 | INFO     | pilot is running in a VM
[2025-06-05 00:19:25] 2025-06-04 22:19:14,907 | INFO     | architecture information:
[2025-06-05 00:19:25] 2025-06-04 22:19:14,907 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:19:25] 2025-06-04 22:19:14,936 | INFO     | cat /etc/os-release:
[2025-06-05 00:19:25] NAME="CentOS Linux"
[2025-06-05 00:19:25] VERSION="7 (Core)"
[2025-06-05 00:19:25] ID="centos"
[2025-06-05 00:19:25] ID_LIKE="rhel fedora"
[2025-06-05 00:19:25] VERSION_ID="7"
[2025-06-05 00:19:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:19:25] ANSI_COLOR="0;31"
[2025-06-05 00:19:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:19:25] HOME_URL="https://www.centos.org/"
[2025-06-05 00:19:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:19:25] 
[2025-06-05 00:19:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:19:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:19:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:19:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:19:25] 
[2025-06-05 00:19:25] 2025-06-04 22:19:14,936 | INFO     | **************************************
[2025-06-05 00:19:25] 2025-06-04 22:19:15,438 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-05 00:19:25] 2025-06-04 22:19:15,473 | INFO     | sufficient remaining disk space (497127784448 B)
[2025-06-05 00:19:25] 2025-06-04 22:19:15,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:19:25] 2025-06-04 22:19:15,474 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:19:25] 2025-06-04 22:19:15,474 | INFO     | update_server=False
[2025-06-05 00:19:25] 2025-06-04 22:19:15,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:19:25] 2025-06-04 22:19:15,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:19:25] 2025-06-04 22:19:15,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:19:25] 2025-06-04 22:19:15,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:19:25] 2025-06-04 22:19:15,475 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 00:19:25] 2025-06-04 22:19:15,476 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:19:25] 2025-06-04 22:19:15,476 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:19:25] 2025-06-04 22:19:15,476 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:19:25] 2025-06-04 22:19:15,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:19:25] 2025-06-04 22:19:15,476 | INFO     | aborting loop
[2025-06-05 00:19:25] 2025-06-04 22:19:15,667 | INFO     | all job control threads have been joined
[2025-06-05 00:19:25] 2025-06-04 22:19:16,243 | INFO     | all data control threads have been joined
[2025-06-05 00:19:25] 2025-06-04 22:19:16,272 | INFO     | all payload control threads have been joined
[2025-06-05 00:19:25] 2025-06-04 22:19:16,479 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:16,480 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:16,481 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:16,495 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:16,672 | INFO     | [job] control thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:16,703 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:17,249 | INFO     | [data] control thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:17,276 | INFO     | [payload] control thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:17,282 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:17,370 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:17,480 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:17,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:17,776 | INFO     | [job] validate thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:17,785 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:17,834 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:19,484 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:19:25] 2025-06-04 22:19:20,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237193234240)>', '<ExcThread(monitor, started 140236755547904)>']
[2025-06-05 00:19:25] 2025-06-04 22:19:20,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:19:25] 2025-06-04 22:19:20,506 | INFO     | [monitor] control thread has ended
[2025-06-05 00:19:25] 2025-06-04 22:19:25,116 | INFO     | all workflow threads have been joined
[2025-06-05 00:19:25] 2025-06-04 22:19:25,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:19:25] 2025-06-04 22:19:25,117 | INFO     | traces error code: 0
[2025-06-05 00:19:25] 2025-06-04 22:19:25,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:19:25] 2025-06-04 22:19:25,456 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:19:25] 2025-06-04 22:19:25,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:19:25] 2025-06-04 22:19:25,471 [wrapper] pilotpid: 21280
[2025-06-05 00:19:25] 2025-06-04 22:19:25,483 [wrapper] Pilot exit status: 0
[2025-06-05 00:19:25] 2025-06-04 22:19:25,509 [wrapper] pandaids: 6678286584
[2025-06-05 00:19:25] 2025-06-04 22:19:25,549 [wrapper] cleanup supervisor_pilot 17978 21281
[2025-06-05 00:19:25] 2025-06-04 22:19:25,556 [wrapper] Test setup, not cleaning
[2025-06-05 00:19:25] 2025-06-04 22:19:25,561 [wrapper] apfmon messages muted
[2025-06-05 00:19:25] 2025-06-04 22:19:25,575 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:19:25] 2025-06-04 22:19:25,581 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:19:25]  *** Error codes and diagnostics ***
[2025-06-05 00:19:25]     "exeErrorCode": 0,
[2025-06-05 00:19:25]     "exeErrorDiag": "",
[2025-06-05 00:19:25]     "pilotErrorCode": 0,
[2025-06-05 00:19:25]     "pilotErrorDiag": "",
[2025-06-05 00:19:25]  *** Listing of results directory ***
[2025-06-05 00:19:25] total 396584
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-05 00:19:25] -rwx------. 1 boinc boinc     37140 Jun  4 05:16 runpilot2-wrapper.sh
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:16 queuedata.json
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc       100 Jun  4 20:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:19:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 20:34 run_atlas
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc       105 Jun  4 20:34 job.xml
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc      6392 Jun  4 20:34 init_data.xml
[2025-06-05 00:19:25] -rw-r--r--. 2 boinc boinc 217737260 Jun  4 20:34 EVNT.45006593._002063.pool.root.1
[2025-06-05 00:19:25] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:34 start_atlas.sh
[2025-06-05 00:19:25] drwxrwx--x. 2 boinc boinc        68 Jun  4 20:34 shared
[2025-06-05 00:19:25] -rw-r--r--. 2 boinc boinc    508876 Jun  4 20:34 input.tar.gz
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc         0 Jun  4 20:34 boinc_lockfile
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc      2525 Jun  4 20:34 pandaJob.out
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc    990984 Jun  4 20:37 agis_schedconf.cvmfs.json
[2025-06-05 00:19:25] drwx------. 4 boinc boinc      4096 Jun  4 20:37 pilot3
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc 181494782 Jun  5 00:18 HITS.45006595._051497.pool.root.1
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc       531 Jun  5 00:18 boinc_task_state.xml
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc      1020 Jun  5 00:18 memory_monitor_summary.json
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc   1598969 Jun  5 00:18 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc    383921 Jun  5 00:18 log.45006595._051497.job.log.tgz.1
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc        95 Jun  5 00:18 pilot_heartbeat.json
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc      7692 Jun  5 00:19 heartbeat.json
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc      8192 Jun  5 00:19 boinc_mmap_file
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc        28 Jun  5 00:19 wrapper_checkpoint.txt
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc      4539 Jun  5 00:19 pilotlog.txt
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc   1138271 Jun  5 00:19 log.45006595._051497.job.log.1
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc       357 Jun  5 00:19 output.list
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc       620 Jun  5 00:19 runtime_log
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc   1546240 Jun  5 00:19 result.tar.gz
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc       657 Jun  5 00:19 TEHLDmRntg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO3mKDmUrse5n.diag
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc      8659 Jun  5 00:19 runtime_log.err
[2025-06-05 00:19:25] -rw-r--r--. 1 boinc boinc     20498 Jun  5 00:19 stderr.txt
[2025-06-05 00:19:25] HITS file was successfully produced:
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc 181494782 Jun  5 00:18 shared/HITS.pool.root.1
[2025-06-05 00:19:25]  *** Contents of shared directory: ***
[2025-06-05 00:19:25] total 391908
[2025-06-05 00:19:25] -rw-r--r--. 2 boinc boinc 217737260 Jun  4 20:34 ATLAS.root_0
[2025-06-05 00:19:25] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:34 start_atlas.sh
[2025-06-05 00:19:25] -rw-r--r--. 2 boinc boinc    508876 Jun  4 20:34 input.tar.gz
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc 181494782 Jun  5 00:18 HITS.pool.root.1
[2025-06-05 00:19:25] -rw-------. 1 boinc boinc   1546240 Jun  5 00:19 result.tar.gz
00:19:27 (16240): run_atlas exited; CPU time 46659.212751
00:19:27 (16240): called boinc_finish(0)

</stderr_txt>
]]>

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