Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:46:58 (23765): wrapper (7.7.26015): starting
18:46:58 (23765): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:46:58] Arguments: --nthreads 8
[2025-06-04 18:46:58] Threads: 8
[2025-06-04 18:46:58] Checking for CVMFS
[2025-06-04 18:46:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:46:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:46:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:47:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:47:00] 2.11.2.0 1205 33455 90388 146788 2 60 21048558 25165824 3135 130560 0 17230763 99.794 19482266 2237 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:47:00] CVMFS is ok
[2025-06-04 18:47:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:47:00] Checking for apptainer binary...
[2025-06-04 18:47:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:47:00] Running /usr/bin/apptainer --version
[2025-06-04 18:47:00] apptainer version 1.3.2-1.el7
[2025-06-04 18:47:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:47:04] cg-vwn325.simple-grid.lan
[2025-06-04 18:47:04] apptainer works
[2025-06-04 18:47:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:47:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:47:04] Starting ATLAS job with PandaID=6678286750
[2025-06-04 18:47:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:53:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:53:09] 2025-06-04 20:41:50,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:53:09] 2025-06-04 20:41:50,443 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:53:09] 2025-06-04 20:41:50,443 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:53:09] 2025-06-04 20:41:50,448 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:53:09] 2025-06-04 20:41:50,449 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 22:53:09] 2025-06-04 20:41:50,455 | INFO     | sum of deviations: 102907824598.0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,455 | INFO     | mean x: 1749062931.5
[2025-06-04 22:53:09] 2025-06-04 20:41:50,455 | INFO     | mean y: 2398824.1559633026
[2025-06-04 22:53:09] 2025-06-04 20:41:50,456 | INFO     | -- intersect: -56026884456.859566
[2025-06-04 22:53:09] 2025-06-04 20:41:50,456 | INFO     | intersect: -56026884456.859566
[2025-06-04 22:53:09] 2025-06-04 20:41:50,456 | INFO     | chi2: 7.117933828769653
[2025-06-04 22:53:09] 2025-06-04 20:41:50,457 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,458 | INFO     | sum of deviations: 115021063016.99998
[2025-06-04 22:53:09] 2025-06-04 20:41:50,459 | INFO     | mean x: 1749062779.0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,459 | INFO     | mean y: 2407182.488262911
[2025-06-04 22:53:09] 2025-06-04 20:41:50,459 | INFO     | -- intersect: -67136630662.003235
[2025-06-04 22:53:09] 2025-06-04 20:41:50,459 | INFO     | intersect: -67136630662.003235
[2025-06-04 22:53:09] 2025-06-04 20:41:50,460 | INFO     | chi2: 6.365843258661861
[2025-06-04 22:53:09] 2025-06-04 20:41:50,460 | INFO     | current chi2=6.365843258661861 (change=10.566136019246924 %)
[2025-06-04 22:53:09] 2025-06-04 20:41:50,462 | INFO     | right removable region: 212
[2025-06-04 22:53:09] 2025-06-04 20:41:50,463 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,464 | INFO     | sum of deviations: 28101179940.999992
[2025-06-04 22:53:09] 2025-06-04 20:41:50,465 | INFO     | mean x: 1749063084.0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,465 | INFO     | mean y: 2451598.9483568077
[2025-06-04 22:53:09] 2025-06-04 20:41:50,465 | INFO     | -- intersect: -16400513762.739002
[2025-06-04 22:53:09] 2025-06-04 20:41:50,465 | INFO     | intersect: -16400513762.739002
[2025-06-04 22:53:09] 2025-06-04 20:41:50,466 | INFO     | chi2: 2.2285686608324706
[2025-06-04 22:53:09] 2025-06-04 20:41:50,466 | INFO     | current chi2=2.2285686608324706 (change=68.6907926591714 %)
[2025-06-04 22:53:09] 2025-06-04 20:41:50,466 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,468 | INFO     | sum of deviations: -8372974649.499999
[2025-06-04 22:53:09] 2025-06-04 20:41:50,468 | INFO     | mean x: 1749063236.5
[2025-06-04 22:53:09] 2025-06-04 20:41:50,468 | INFO     | mean y: 2478398.2548076925
[2025-06-04 22:53:09] 2025-06-04 20:41:50,468 | INFO     | -- intersect: 5250878041.166075
[2025-06-04 22:53:09] 2025-06-04 20:41:50,469 | INFO     | intersect: 5250878041.166075
[2025-06-04 22:53:09] 2025-06-04 20:41:50,469 | INFO     | chi2: 0.8574189892946006
[2025-06-04 22:53:09] 2025-06-04 20:41:50,469 | INFO     | current chi2=0.8574189892946006 (change=61.526023211045434 %)
[2025-06-04 22:53:09] 2025-06-04 20:41:50,470 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,474 | INFO     | sum of deviations: -7915216283.999998
[2025-06-04 22:53:09] 2025-06-04 20:41:50,475 | INFO     | mean x: 1749063389.0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,475 | INFO     | mean y: 2477995.369458128
[2025-06-04 22:53:09] 2025-06-04 20:41:50,475 | INFO     | -- intersect: 5339663981.965099
[2025-06-04 22:53:09] 2025-06-04 20:41:50,475 | INFO     | intersect: 5339663981.965099
[2025-06-04 22:53:09] 2025-06-04 20:41:50,476 | INFO     | chi2: 0.8402025067098701
[2025-06-04 22:53:09] 2025-06-04 20:41:50,476 | INFO     | current chi2=0.8402025067098701 (change=2.007942767735356 %)
[2025-06-04 22:53:09] 2025-06-04 20:41:50,476 | INFO     | left removable region: 30
[2025-06-04 22:53:09] 2025-06-04 20:41:50,476 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 22:53:09] 2025-06-04 20:41:50,478 | INFO     | sum of deviations: 1855012013.0000005
[2025-06-04 22:53:09] 2025-06-04 20:41:50,478 | INFO     | mean x: 1749063663.5
[2025-06-04 22:53:09] 2025-06-04 20:41:50,478 | INFO     | mean y: 2492497.208791209
[2025-06-04 22:53:09] 2025-06-04 20:41:50,478 | INFO     | -- intersect: -1733200324.5151055
[2025-06-04 22:53:09] 2025-06-04 20:41:50,478 | INFO     | intersect: -1733200324.5151055
[2025-06-04 22:53:09] 2025-06-04 20:41:50,479 | INFO     | chi2: 0.00016442898018475359
[2025-06-04 22:53:09] 2025-06-04 20:41:50,479 | INFO     | -- intersect: -1733200324.5151055
[2025-06-04 22:53:09] 2025-06-04 20:41:50,479 | INFO     | current memory leak: 0.99 B/s (using 182 data points, chi2=0.00)
[2025-06-04 22:53:09] 2025-06-04 20:41:50,480 | INFO     | ..............................
[2025-06-04 22:53:09] 2025-06-04 20:41:50,480 | INFO     | . Timing measurements:
[2025-06-04 22:53:09] 2025-06-04 20:41:50,480 | INFO     | . get job = 0 s
[2025-06-04 22:53:09] 2025-06-04 20:41:50,480 | INFO     | . initial setup = 8 s
[2025-06-04 22:53:09] 2025-06-04 20:41:50,480 | INFO     | . payload setup = 176 s
[2025-06-04 22:53:09] 2025-06-04 20:41:50,481 | INFO     | . stage-in = 0 s
[2025-06-04 22:53:09] 2025-06-04 20:41:50,481 | INFO     | . payload execution = 13446 s
[2025-06-04 22:53:09] 2025-06-04 20:41:50,481 | INFO     | . stage-out = 3 s
[2025-06-04 22:53:09] 2025-06-04 20:41:50,481 | INFO     | . log creation = 1 s
[2025-06-04 22:53:09] 2025-06-04 20:41:50,481 | INFO     | ..............................
[2025-06-04 22:53:09] 2025-06-04 20:41:50,990 | INFO     | 
[2025-06-04 22:53:09] 2025-06-04 20:41:50,990 | INFO     | job summary report
[2025-06-04 22:53:09] 2025-06-04 20:41:50,991 | INFO     | --------------------------------------------------
[2025-06-04 22:53:09] 2025-06-04 20:41:50,991 | INFO     | PanDA job id: 6678286750
[2025-06-04 22:53:09] 2025-06-04 20:41:50,991 | INFO     | task id: 45006595
[2025-06-04 22:53:09] 2025-06-04 20:41:50,991 | INFO     | errors: (none)
[2025-06-04 22:53:09] 2025-06-04 20:41:50,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:53:09] 2025-06-04 20:41:50,991 | INFO     | pilot state: finished 
[2025-06-04 22:53:09] 2025-06-04 20:41:50,991 | INFO     | transexitcode: 0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,991 | INFO     | exeerrorcode: 0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,991 | INFO     | exeerrordiag: 
[2025-06-04 22:53:09] 2025-06-04 20:41:50,992 | INFO     | exitcode: 0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,992 | INFO     | exitmsg: OK
[2025-06-04 22:53:09] 2025-06-04 20:41:50,992 | INFO     | cpuconsumptiontime: 49817 s
[2025-06-04 22:53:09] 2025-06-04 20:41:50,992 | INFO     | nevents: 400
[2025-06-04 22:53:09] 2025-06-04 20:41:50,992 | INFO     | neventsw: 0
[2025-06-04 22:53:09] 2025-06-04 20:41:50,992 | INFO     | pid: 5262
[2025-06-04 22:53:09] 2025-06-04 20:41:50,992 | INFO     | pgrp: 5262
[2025-06-04 22:53:09] 2025-06-04 20:41:50,992 | INFO     | corecount: 8
[2025-06-04 22:53:09] 2025-06-04 20:41:50,992 | INFO     | event service: False
[2025-06-04 22:53:09] 2025-06-04 20:41:50,993 | INFO     | sizes: {0: 2396513, 1: 2397370, 2: 2397370, 12: 2397398, 23: 2397426, 34: 2397454, 45: 2397610, 55: 2397638, 66: 2397666, 77: 2397694, 87: 2397750, 91: 2398264, 98
[2025-06-04 22:53:09] 2025-06-04 20:41:50,993 | INFO     | --------------------------------------------------
[2025-06-04 22:53:09] 2025-06-04 20:41:50,993 | INFO     | 
[2025-06-04 22:53:09] 2025-06-04 20:41:50,993 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-04 22:53:09] 2025-06-04 20:41:51,148 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:53:09] 2025-06-04 20:41:51,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:53:09] 2025-06-04 20:41:51,151 | INFO     | job 6678286750 has completed (purged errors)
[2025-06-04 22:53:09] 2025-06-04 20:41:51,151 | INFO     | overall cleanup function is called
[2025-06-04 22:53:09] 2025-06-04 20:41:52,160 | INFO     | --- collectZombieJob: --- 10, [5262]
[2025-06-04 22:53:09] 2025-06-04 20:41:52,160 | INFO     | zombie collector waiting for pid 5262
[2025-06-04 22:53:09] 2025-06-04 20:41:52,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:53:09] 2025-06-04 20:41:52,161 | INFO     | collected zombie processes
[2025-06-04 22:53:09] 2025-06-04 20:41:52,161 | INFO     | will attempt to kill all subprocesses of pid=5262
[2025-06-04 22:53:09] 2025-06-04 20:41:52,286 | INFO     | process IDs to be killed: [5262] (in reverse order)
[2025-06-04 22:53:09] 2025-06-04 20:41:52,796 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:53:09] 2025-06-04 20:41:52,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:53:09] 2025-06-04 20:41:52,807 | INFO     | did not find any defunct processes belonging to 5262
[2025-06-04 22:53:09] 2025-06-04 20:41:52,810 | INFO     | did not find any defunct processes belonging to 5262
[2025-06-04 22:53:09] 2025-06-04 20:41:52,810 | INFO     | ready for new job
[2025-06-04 22:53:09] 2025-06-04 20:41:52,811 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:53:09] 2025-06-04 20:41:52,813 | INFO     | **************************************
[2025-06-04 22:53:09] 2025-06-04 20:41:52,813 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:53:09] 2025-06-04 20:41:52,813 | INFO     | **************************************
[2025-06-04 22:53:09] 2025-06-04 20:41:52,813 | INFO     | 
[2025-06-04 22:53:09] 2025-06-04 20:41:52,814 | INFO     | pilot is running in a VM
[2025-06-04 22:53:09] 2025-06-04 20:41:52,814 | INFO     | architecture information:
[2025-06-04 22:53:09] 2025-06-04 20:41:52,828 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:53:09] 2025-06-04 20:41:53,034 | INFO     | cat /etc/os-release:
[2025-06-04 22:53:09] NAME="CentOS Linux"
[2025-06-04 22:53:09] VERSION="7 (Core)"
[2025-06-04 22:53:09] ID="centos"
[2025-06-04 22:53:09] ID_LIKE="rhel fedora"
[2025-06-04 22:53:09] VERSION_ID="7"
[2025-06-04 22:53:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:53:09] ANSI_COLOR="0;31"
[2025-06-04 22:53:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:53:09] HOME_URL="https://www.centos.org/"
[2025-06-04 22:53:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:53:09] 
[2025-06-04 22:53:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:53:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:53:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:53:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:53:09] 
[2025-06-04 22:53:09] 2025-06-04 20:41:53,035 | INFO     | **************************************
[2025-06-04 22:53:09] 2025-06-04 20:41:53,538 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-04 22:53:09] 2025-06-04 20:41:53,693 | INFO     | sufficient remaining disk space (497288216576 B)
[2025-06-04 22:53:09] 2025-06-04 20:41:53,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:53:09] 2025-06-04 20:41:53,694 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:53:09] 2025-06-04 20:41:53,694 | INFO     | update_server=False
[2025-06-04 22:53:09] 2025-06-04 20:41:53,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:53:09] 2025-06-04 20:41:53,708 | INFO     | all data control threads have been joined
[2025-06-04 22:53:09] 2025-06-04 20:41:53,789 | INFO     | all payload control threads have been joined
[2025-06-04 22:53:09] 2025-06-04 20:41:54,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:53:09] 2025-06-04 20:41:54,113 | INFO     | aborting loop
[2025-06-04 22:53:09] 2025-06-04 20:41:54,176 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:53:09] 2025-06-04 20:41:54,340 | INFO     | all job control threads have been joined
[2025-06-04 22:53:09] 2025-06-04 20:41:54,622 | INFO     | PID=30891 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 22:53:09] 2025-06-04 20:41:54,622 | INFO     | .. there are 9 such processes running
[2025-06-04 22:53:09] 2025-06-04 20:41:54,623 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:53:09] 2025-06-04 20:41:54,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:53:09] 2025-06-04 20:41:54,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:53:09] 2025-06-04 20:41:54,700 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:54,714 | INFO     | [data] control thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:54,795 | INFO     | [payload] control thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:55,080 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:55,087 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:55,119 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:55,346 | INFO     | [job] control thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:55,519 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:55,567 | INFO     | [job] validate thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:55,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:53:09] 2025-06-04 20:41:55,735 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:55,742 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:55,758 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:56,183 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:56,668 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:41:56,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:53:09] 2025-06-04 20:42:00,749 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:42:03,754 | INFO     | job.realtimelogging is not enabled
[2025-06-04 22:53:09] 2025-06-04 20:42:04,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:53:09] 2025-06-04 20:42:06,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633740670784)>', '<ExcThread(monitor, started 139633430075136)>']
[2025-06-04 22:53:09] 2025-06-04 20:42:06,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:53:09] 2025-06-04 20:42:06,695 | INFO     | [monitor] control thread has ended
[2025-06-04 22:53:09] 2025-06-04 20:42:11,523 | INFO     | all workflow threads have been joined
[2025-06-04 22:53:09] 2025-06-04 20:42:11,523 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:53:09] 2025-06-04 20:42:11,524 | INFO     | traces error code: 0
[2025-06-04 22:53:09] 2025-06-04 20:42:11,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:53:09] 2025-06-04 20:42:11,960 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:53:09] 2025-06-04 20:42:12,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:53:09] 2025-06-04 20:42:12,097 [wrapper] pilotpid: 30891
[2025-06-04 22:53:09] 2025-06-04 20:42:12,181 [wrapper] Pilot exit status: 0
[2025-06-04 22:53:09] 2025-06-04 20:42:12,601 [wrapper] pandaids: 6678286750
[2025-06-04 22:53:09] 2025-06-04 20:42:13,492 [wrapper] cleanup supervisor_pilot 13499 30892
[2025-06-04 22:53:09] 2025-06-04 20:42:13,581 [wrapper] Test setup, not cleaning
[2025-06-04 22:53:09] 2025-06-04 20:42:13,685 [wrapper] apfmon messages muted
[2025-06-04 22:53:09] 2025-06-04 20:42:13,777 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:53:09] 2025-06-04 20:42:13,803 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:53:09]  *** Error codes and diagnostics ***
[2025-06-04 22:53:09]     "exeErrorCode": 0,
[2025-06-04 22:53:09]     "exeErrorDiag": "",
[2025-06-04 22:53:09]     "pilotErrorCode": 0,
[2025-06-04 22:53:09]     "pilotErrorDiag": "",
[2025-06-04 22:53:09]  *** Listing of results directory ***
[2025-06-04 22:53:09] total 389368
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc    495897 Jun  4 05:29 pilot3.tar.gz
[2025-06-04 22:53:09] -rwx------. 1 boinc boinc     37140 Jun  4 05:33 runpilot2-wrapper.sh
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:33 queuedata.json
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:53:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:46 run_atlas
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:46 job.xml
[2025-06-04 22:53:09] -rw-r--r--. 2 boinc boinc 216262970 Jun  4 18:46 EVNT.45006593._002070.pool.root.1
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc      6392 Jun  4 18:46 init_data.xml
[2025-06-04 22:53:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:46 start_atlas.sh
[2025-06-04 22:53:09] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:46 shared
[2025-06-04 22:53:09] -rw-r--r--. 2 boinc boinc    508877 Jun  4 18:46 input.tar.gz
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:46 boinc_lockfile
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc      2524 Jun  4 18:47 pandaJob.out
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc    990984 Jun  4 18:49 agis_schedconf.cvmfs.json
[2025-06-04 22:53:09] drwx------. 4 boinc boinc      4096 Jun  4 18:50 pilot3
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc 175490299 Jun  4 22:38 HITS.45006595._051663.pool.root.1
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc       531 Jun  4 22:39 boinc_task_state.xml
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc      1013 Jun  4 22:40 memory_monitor_summary.json
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc   1598969 Jun  4 22:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc    378846 Jun  4 22:40 log.45006595._051663.job.log.tgz.1
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc        95 Jun  4 22:41 pilot_heartbeat.json
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc      7685 Jun  4 22:41 heartbeat.json
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc      4881 Jun  4 22:42 pilotlog.txt
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc   1191624 Jun  4 22:42 log.45006595._051663.job.log.1
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc       357 Jun  4 22:42 output.list
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:42 runtime_log
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc   1587200 Jun  4 22:42 result.tar.gz
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc       656 Jun  4 22:42 3MaKDmQ3tg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmldaKDmDB973m.diag
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc      8673 Jun  4 22:42 runtime_log.err
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc      8192 Jun  4 22:53 boinc_mmap_file
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc        28 Jun  4 22:53 wrapper_checkpoint.txt
[2025-06-04 22:53:09] -rw-r--r--. 1 boinc boinc     20583 Jun  4 22:53 stderr.txt
[2025-06-04 22:53:09] HITS file was successfully produced:
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc 175490299 Jun  4 22:38 shared/HITS.pool.root.1
[2025-06-04 22:53:09]  *** Contents of shared directory: ***
[2025-06-04 22:53:09] total 384644
[2025-06-04 22:53:09] -rw-r--r--. 2 boinc boinc 216262970 Jun  4 18:46 ATLAS.root_0
[2025-06-04 22:53:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:46 start_atlas.sh
[2025-06-04 22:53:09] -rw-r--r--. 2 boinc boinc    508877 Jun  4 18:46 input.tar.gz
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc 175490299 Jun  4 22:38 HITS.pool.root.1
[2025-06-04 22:53:09] -rw-------. 1 boinc boinc   1587200 Jun  4 22:42 result.tar.gz
22:53:11 (23765): run_atlas exited; CPU time 50019.253334
22:53:11 (23765): called boinc_finish(0)

</stderr_txt>
]]>

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