Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
16:26:38 (395379): wrapper (7.7.26015): starting
16:26:38 (395379): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 16:26:38] Arguments: --nthreads 12
[2025-06-04 16:26:38] Threads: 12
[2025-06-04 16:26:38] Checking for CVMFS
[2025-06-04 16:26:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:26:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:26:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:26:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:26:38] 2.13.0.0 3386825 3021 48896 146795 1 55 3722098 6144000 0 130560 0 1642841 99.993 437560 2841 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 16:26:38] CVMFS is ok
[2025-06-04 16:26:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:26:38] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 16:26:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 16:26:38] Further information can be found at the LHC@home message board.
[2025-06-04 16:26:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:26:38] Checking for apptainer binary...
[2025-06-04 16:26:38] apptainer is not installed, using version from CVMFS
[2025-06-04 16:26:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:26:38] ace
[2025-06-04 16:26:38] apptainer works
[2025-06-04 16:26:38] Set ATHENA_PROC_NUMBER=12
[2025-06-04 16:26:38] Set ATHENA_CORE_NUMBER=12
[2025-06-04 16:26:38] Starting ATLAS job with PandaID=6666240074
[2025-06-04 16:26:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:58:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:58:12]  lfn=log.44871837._056344.job.log.tgz.1
[2025-06-04 17:58:12]  mtime=0
[2025-06-04 17:58:12]  protocol_id=None
[2025-06-04 17:58:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:58:12]  replicas=None
[2025-06-04 17:58:12]  scope=mc23_13p6TeV
[2025-06-04 17:58:12]  status=None
[2025-06-04 17:58:12]  status_code=0
[2025-06-04 17:58:12]  storage_token=
[2025-06-04 17:58:12]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6666240074/log.44871837._056344.job.log.tgz.1
[2025-06-04 17:58:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/ba/log.44871837._056344.job.log.tgz.1
[2025-06-04 17:58:12]  workdir=None
[2025-06-04 17:58:12] ]
[2025-06-04 17:58:12] 2025-06-04 22:57:51,080 | INFO     | transferring file log.44871837._056344.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6666240074/log.44871837._056344.job.log.tgz.1 to /var/lib/boinc
[2025-06-04 17:58:12] 2025-06-04 22:57:51,080 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6666240074/log.44871837._056344.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.448718
[2025-06-04 17:58:12] 2025-06-04 22:57:51,094 | INFO     | adding to output.list: log.44871837._056344.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/ba/log.44871837._056344.job.log.tg
[2025-06-04 17:58:12] 2025-06-04 22:57:51,094 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:58:12] 2025-06-04 22:57:51,094 | INFO     | summary of transferred files:
[2025-06-04 17:58:12] 2025-06-04 22:57:51,095 | INFO     |  -- lfn=log.44871837._056344.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:58:12] 2025-06-04 22:57:51,095 | INFO     | stage-out finished correctly
[2025-06-04 17:58:12] 2025-06-04 22:57:51,641 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:58:12] 2025-06-04 22:57:51,688 | INFO     | job 6666240074 has state=finished
[2025-06-04 17:58:12] 2025-06-04 22:57:51,688 | INFO     | preparing for final server update for job 6666240074 in state='finished'
[2025-06-04 17:58:12] 2025-06-04 22:57:51,688 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:58:12] 2025-06-04 22:57:51,688 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:58:12] 2025-06-04 22:57:51,688 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:58:12] 2025-06-04 22:57:51,688 | INFO     | job 6666240074 has finished - writing final server update
[2025-06-04 17:58:12] 2025-06-04 22:57:51,688 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:58:12] 2025-06-04 22:57:51,690 | INFO     | executing command: lscpu
[2025-06-04 17:58:12] 2025-06-04 22:57:51,710 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:58:12] 2025-06-04 22:57:51,832 | INFO     | monitor loop #409: job 0:6666240074 is in state 'finished'
[2025-06-04 17:58:12] 2025-06-04 22:57:51,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:58:12] 2025-06-04 22:57:54,335 | INFO     | monitor loop #410: job 0:6666240074 is in state 'finished'
[2025-06-04 17:58:12] 2025-06-04 22:57:54,335 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:58:12] 2025-06-04 22:57:56,838 | INFO     | monitor loop #411: job 0:6666240074 is in state 'finished'
[2025-06-04 17:58:12] 2025-06-04 22:57:56,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:58:12] 2025-06-04 22:57:59,341 | INFO     | monitor loop #412: job 0:6666240074 is in state 'finished'
[2025-06-04 17:58:12] 2025-06-04 22:57:59,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:58:12] 2025-06-04 22:57:59,963 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:58:12] 2025-06-04 22:57:59,963 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6666240074/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:58:12] 2025-06-04 22:57:59,964 | INFO     | extracted standard info from prmon json
[2025-06-04 17:58:12] 2025-06-04 22:57:59,964 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:58:12] 2025-06-04 22:57:59,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:58:12] 2025-06-04 22:57:59,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:58:12] 2025-06-04 22:57:59,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:58:12] 2025-06-04 22:57:59,965 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:58:12] 2025-06-04 22:57:59,966 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 17:58:12] 2025-06-04 22:57:59,966 | INFO     | sum of deviations: -20079370854.000004
[2025-06-04 17:58:12] 2025-06-04 22:57:59,966 | INFO     | mean x: 1749075234.0
[2025-06-04 17:58:12] 2025-06-04 22:57:59,966 | INFO     | mean y: 2935667.373493976
[2025-06-04 17:58:12] 2025-06-04 22:57:59,966 | INFO     | -- intersect: 198114093704.2735
[2025-06-04 17:58:12] 2025-06-04 22:57:59,966 | INFO     | intersect: 198114093704.2735
[2025-06-04 17:58:12] 2025-06-04 22:57:59,966 | INFO     | chi2: 0.12259070274872796
[2025-06-04 17:58:12] 2025-06-04 22:57:59,966 | INFO     | -- intersect: 198114093704.2735
[2025-06-04 17:58:12] 2025-06-04 22:57:59,966 | INFO     | current memory leak: -113.27 B/s (using 83 data points, chi2=0.12)
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | ..............................
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | . Timing measurements:
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | . get job = 0 s
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | . initial setup = 3 s
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | . payload setup = 3 s
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | . stage-in = 0 s
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | . payload execution = 5441 s
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | . stage-out = 0 s
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | . log creation = 0 s
[2025-06-04 17:58:12] 2025-06-04 22:57:59,967 | INFO     | ..............................
[2025-06-04 17:58:12] 2025-06-04 22:58:00,022 | INFO     | 
[2025-06-04 17:58:12] 2025-06-04 22:58:00,022 | INFO     | job summary report
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | --------------------------------------------------
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | PanDA job id: 6666240074
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | task id: 44871837
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | errors: (none)
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | pilot state: finished 
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | transexitcode: 0
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | exeerrorcode: 0
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | exeerrordiag: 
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | exitcode: 0
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | exitmsg: OK
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | cpuconsumptiontime: 60883 s
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | nevents: 400
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | neventsw: 0
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | pid: 405577
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | pgrp: 405577
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | corecount: 12
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | event service: False
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | sizes: {0: 2397393, 3: 2397599, 11: 2397627, 5448: 2424196, 5450: 2433151, 5451: 2433207, 5459: 2433505}
[2025-06-04 17:58:12] 2025-06-04 22:58:00,023 | INFO     | --------------------------------------------------
[2025-06-04 17:58:12] 2025-06-04 22:58:00,024 | INFO     | 
[2025-06-04 17:58:12] 2025-06-04 22:58:00,024 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-04 17:58:12] 2025-06-04 22:58:00,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,043 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,043 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,044 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:58:12] 2025-06-04 22:58:00,045 | INFO     | job 6666240074 has completed (purged errors)
[2025-06-04 17:58:12] 2025-06-04 22:58:00,045 | INFO     | overall cleanup function is called
[2025-06-04 17:58:12] 2025-06-04 22:58:00,378 | INFO     | PID=399068 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 17:58:12] 2025-06-04 22:58:01,052 | INFO     | --- collectZombieJob: --- 10, [405577]
[2025-06-04 17:58:12] 2025-06-04 22:58:01,052 | INFO     | zombie collector waiting for pid 405577
[2025-06-04 17:58:12] 2025-06-04 22:58:01,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:58:12] 2025-06-04 22:58:01,053 | INFO     | collected zombie processes
[2025-06-04 17:58:12] 2025-06-04 22:58:01,053 | INFO     | will attempt to kill all subprocesses of pid=405577
[2025-06-04 17:58:12] 2025-06-04 22:58:01,128 | INFO     | process IDs to be killed: [405577] (in reverse order)
[2025-06-04 17:58:12] 2025-06-04 22:58:01,161 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:58:12] 2025-06-04 22:58:01,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:58:12] 2025-06-04 22:58:01,164 | INFO     | did not find any defunct processes belonging to 405577
[2025-06-04 17:58:12] 2025-06-04 22:58:01,166 | INFO     | did not find any defunct processes belonging to 405577
[2025-06-04 17:58:12] 2025-06-04 22:58:01,166 | INFO     | ready for new job
[2025-06-04 17:58:12] 2025-06-04 22:58:01,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:58:12] 2025-06-04 22:58:01,167 | INFO     | **************************************
[2025-06-04 17:58:12] 2025-06-04 22:58:01,167 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:58:12] 2025-06-04 22:58:01,167 | INFO     | **************************************
[2025-06-04 17:58:12] 2025-06-04 22:58:01,167 | INFO     | 
[2025-06-04 17:58:12] 2025-06-04 22:58:01,168 | INFO     | architecture information:
[2025-06-04 17:58:12] 2025-06-04 22:58:01,169 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:58:12] 2025-06-04 22:58:01,179 | INFO     | cat /etc/os-release:
[2025-06-04 17:58:12] NAME="CentOS Linux"
[2025-06-04 17:58:12] VERSION="7 (Core)"
[2025-06-04 17:58:12] ID="centos"
[2025-06-04 17:58:12] ID_LIKE="rhel fedora"
[2025-06-04 17:58:12] VERSION_ID="7"
[2025-06-04 17:58:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:58:12] ANSI_COLOR="0;31"
[2025-06-04 17:58:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:58:12] HOME_URL="https://www.centos.org/"
[2025-06-04 17:58:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:58:12] 
[2025-06-04 17:58:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:58:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:58:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:58:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:58:12] 
[2025-06-04 17:58:12] 2025-06-04 22:58:01,180 | INFO     | **************************************
[2025-06-04 17:58:12] 2025-06-04 22:58:01,681 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-04 17:58:12] 2025-06-04 22:58:01,695 | INFO     | sufficient remaining disk space (24238882816 B)
[2025-06-04 17:58:12] 2025-06-04 22:58:01,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:58:12] 2025-06-04 22:58:01,695 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:58:12] 2025-06-04 22:58:01,695 | INFO     | update_server=False
[2025-06-04 17:58:12] 2025-06-04 22:58:01,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:58:12] 2025-06-04 22:58:01,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:58:12] 2025-06-04 22:58:01,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:58:12] 2025-06-04 22:58:01,741 | INFO     | all data control threads have been joined
[2025-06-04 17:58:12] 2025-06-04 22:58:01,844 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 17:58:12] 2025-06-04 22:58:01,844 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 17:58:12] 2025-06-04 22:58:01,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:58:12] 2025-06-04 22:58:01,844 | INFO     | will abort loop
[2025-06-04 17:58:12] 2025-06-04 22:58:01,885 | INFO     | all payload control threads have been joined
[2025-06-04 17:58:12] 2025-06-04 22:58:02,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:58:12] 2025-06-04 22:58:02,381 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:58:12] 2025-06-04 22:58:02,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:58:12] 2025-06-04 22:58:02,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:58:12] 2025-06-04 22:58:02,701 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:02,701 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:02,746 | INFO     | [data] control thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:02,849 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:02,889 | INFO     | [payload] control thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:03,001 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:03,020 | INFO     | all job control threads have been joined
[2025-06-04 17:58:12] 2025-06-04 22:58:03,169 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:03,647 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:03,701 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:03,740 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:03,751 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:03,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:04,025 | INFO     | [job] control thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:04,072 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:04,161 | INFO     | [job] validate thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:06,201 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:58:12] 2025-06-04 22:58:07,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814110398272)>', '<ExcThread(monitor, started 139813575444224)>']
[2025-06-04 17:58:12] 2025-06-04 22:58:08,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:58:12] 2025-06-04 22:58:08,405 | INFO     | [monitor] control thread has ended
[2025-06-04 17:58:12] 2025-06-04 22:58:12,774 | INFO     | all workflow threads have been joined
[2025-06-04 17:58:12] 2025-06-04 22:58:12,775 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:58:12] 2025-06-04 22:58:12,775 | INFO     | traces error code: 0
[2025-06-04 17:58:12] 2025-06-04 22:58:12,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:58:12] 2025-06-04 22:58:12,854 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:58:12] 2025-06-04 22:58:12,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:58:12] 2025-06-04 22:58:12,858 [wrapper] pilotpid: 399068
[2025-06-04 17:58:12] 2025-06-04 22:58:12,861 [wrapper] Pilot exit status: 0
[2025-06-04 17:58:12] 2025-06-04 22:58:12,868 [wrapper] pandaids: 6666240074
[2025-06-04 17:58:12] 2025-06-04 22:58:12,889 [wrapper] cleanup supervisor_pilot  420019 399069
[2025-06-04 17:58:12] 2025-06-04 22:58:12,891 [wrapper] Test setup, not cleaning
[2025-06-04 17:58:12] 2025-06-04 22:58:12,893 [wrapper] apfmon messages muted
[2025-06-04 17:58:12] 2025-06-04 22:58:12,895 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:58:12] 2025-06-04 22:58:12,896 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:58:12]  *** Error codes and diagnostics ***
[2025-06-04 17:58:12]     "exeErrorCode": 0,
[2025-06-04 17:58:12]     "exeErrorDiag": "",
[2025-06-04 17:58:12]     "pilotErrorCode": 0,
[2025-06-04 17:58:12]     "pilotErrorDiag": "",
[2025-06-04 17:58:12]  *** Listing of results directory ***
[2025-06-04 17:58:12] total 426484
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc    495897 May 26 15:15 pilot3.tar.gz
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc      5111 May 26 15:17 queuedata.json
[2025-06-04 17:58:12] -rwx------ 1 boinc boinc     37140 May 26 15:17 runpilot2-wrapper.sh
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc       100 Jun  4 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:58:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 16:26 run_atlas
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc       105 Jun  4 16:26 job.xml
[2025-06-04 17:58:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:26 start_atlas.sh
[2025-06-04 17:58:12] drwxrwx--x 2 boinc boinc      4096 Jun  4 16:26 shared
[2025-06-04 17:58:12] -rw-r--r-- 2 boinc boinc    508875 Jun  4 16:26 input.tar.gz
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc      6748 Jun  4 16:26 init_data.xml
[2025-06-04 17:58:12] -rw-r--r-- 2 boinc boinc 225199858 Jun  4 16:26 EVNT.44871834._002235.pool.root.1
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc         0 Jun  4 16:26 boinc_lockfile
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc      2556 Jun  4 16:26 pandaJob.out
[2025-06-04 17:58:12] -rw------- 1 boinc boinc    987032 Jun  4 16:26 agis_schedconf.cvmfs.json
[2025-06-04 17:58:12] -rw------- 1 boinc boinc   1598969 Jun  4 16:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:58:12] drwx------ 4 boinc boinc      4096 Jun  4 16:26 pilot3
[2025-06-04 17:58:12] -rw------- 1 boinc boinc 205923734 Jun  4 17:57 HITS.44871837._056344.pool.root.1
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc       529 Jun  4 17:57 boinc_task_state.xml
[2025-06-04 17:58:12] -rw------- 1 boinc boinc      1030 Jun  4 17:57 memory_monitor_summary.json
[2025-06-04 17:58:12] -rw------- 1 boinc boinc        95 Jun  4 17:57 pilot_heartbeat.json
[2025-06-04 17:58:12] -rw------- 1 boinc boinc    357376 Jun  4 17:57 log.44871837._056344.job.log.tgz.1
[2025-06-04 17:58:12] -rw------- 1 boinc boinc      7672 Jun  4 17:57 heartbeat.json
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:58 boinc_mmap_file
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc        27 Jun  4 17:58 wrapper_checkpoint.txt
[2025-06-04 17:58:12] -rw------- 1 boinc boinc      4546 Jun  4 17:58 pilotlog.txt
[2025-06-04 17:58:12] -rw------- 1 boinc boinc    521371 Jun  4 17:58 log.44871837._056344.job.log.1
[2025-06-04 17:58:12] -rw------- 1 boinc boinc       357 Jun  4 17:58 output.list
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:58 runtime_log
[2025-06-04 17:58:12] -rw------- 1 boinc boinc    901120 Jun  4 17:58 result.tar.gz
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc      8696 Jun  4 17:58 runtime_log.err
[2025-06-04 17:58:12] -rw------- 1 boinc boinc       641 Jun  4 17:58 fI3LDmERtd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAiQKDmy9KPvm.diag
[2025-06-04 17:58:12] -rw-r--r-- 1 boinc boinc     21770 Jun  4 17:58 stderr.txt
[2025-06-04 17:58:12] HITS file was successfully produced:
[2025-06-04 17:58:12] -rw------- 1 boinc boinc 205923734 Jun  4 17:57 shared/HITS.pool.root.1
[2025-06-04 17:58:12]  *** Contents of shared directory: ***
[2025-06-04 17:58:12] total 422428
[2025-06-04 17:58:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:26 start_atlas.sh
[2025-06-04 17:58:12] -rw-r--r-- 2 boinc boinc    508875 Jun  4 16:26 input.tar.gz
[2025-06-04 17:58:12] -rw-r--r-- 2 boinc boinc 225199858 Jun  4 16:26 ATLAS.root_0
[2025-06-04 17:58:12] -rw------- 1 boinc boinc 205923734 Jun  4 17:57 HITS.pool.root.1
[2025-06-04 17:58:12] -rw------- 1 boinc boinc    901120 Jun  4 17:58 result.tar.gz
17:58:14 (395379): run_atlas exited; CPU time 60948.538775
17:58:14 (395379): called boinc_finish(0)

</stderr_txt>
]]>

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