Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:41:04 (2457477): wrapper (7.7.26015): starting
00:41:04 (2457477): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:41:04] Arguments: --nthreads 12
[2025-06-05 00:41:04] Threads: 12
[2025-06-05 00:41:04] Checking for CVMFS
[2025-06-05 00:41:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:41:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:41:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:41:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:41:04] 2.12.7.0 28267 2622 77892 146799 1 56 3510355 4096000 0 130560 0 6753939 99.997 631411 161 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 00:41:04] CVMFS is ok
[2025-06-05 00:41:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:41:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 00:41:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 00:41:04] Further information can be found at the LHC@home message board.
[2025-06-05 00:41:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:41:04] Checking for apptainer binary...
[2025-06-05 00:41:04] apptainer is not installed, using version from CVMFS
[2025-06-05 00:41:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:41:05] ryzen7
[2025-06-05 00:41:05] apptainer works
[2025-06-05 00:41:05] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:41:05] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:41:05] Starting ATLAS job with PandaID=6677675629
[2025-06-05 00:41:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:54:40]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:54:40] 2025-06-05 01:53:42,170 | INFO     | monitor loop #331: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:53:42,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:53:44,682 | INFO     | monitor loop #332: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:53:44,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:53:47,194 | INFO     | monitor loop #333: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:53:47,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:53:49,706 | INFO     | monitor loop #334: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:53:49,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:53:51,025 | INFO     | PID=2461230 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 01:54:40] 2025-06-05 01:53:51,025 | INFO     | .. there are 3 such processes running
[2025-06-05 01:54:40] 2025-06-05 01:53:52,218 | INFO     | monitor loop #335: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:53:52,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:53:54,730 | INFO     | monitor loop #336: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:53:54,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:53:57,242 | INFO     | monitor loop #337: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:53:57,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:53:59,750 | INFO     | monitor loop #338: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:53:59,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:00,066 | INFO     | 4372s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 01:54:40] 2025-06-05 01:54:02,251 | INFO     | monitor loop #339: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:02,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:04,758 | INFO     | monitor loop #340: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:04,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:07,258 | INFO     | monitor loop #341: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:07,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:09,766 | INFO     | monitor loop #342: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:09,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:12,278 | INFO     | monitor loop #343: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:12,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:13,307 | INFO     | PID=2461230 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 01:54:40] 2025-06-05 01:54:13,307 | INFO     | .. there are 3 such processes running
[2025-06-05 01:54:40] 2025-06-05 01:54:14,790 | INFO     | monitor loop #344: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:14,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:17,302 | INFO     | monitor loop #345: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:17,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:19,815 | INFO     | monitor loop #346: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:19,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:22,326 | INFO     | monitor loop #347: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:22,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:24,838 | INFO     | monitor loop #348: job 0:6677675629 is in state 'finished'
[2025-06-05 01:54:40] 2025-06-05 01:54:24,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:54:40] 2025-06-05 01:54:26,310 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:54:40] 2025-06-05 01:54:26,310 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6677675629/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:54:40] 2025-06-05 01:54:26,311 | INFO     | extracted standard info from prmon json
[2025-06-05 01:54:40] 2025-06-05 01:54:26,311 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:54:40] 2025-06-05 01:54:26,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:54:40] 2025-06-05 01:54:26,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:54:40] 2025-06-05 01:54:26,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:54:40] 2025-06-05 01:54:26,319 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:54:40] 2025-06-05 01:54:26,319 | INFO     | sum of square deviations: 81266640.0
[2025-06-05 01:54:40] 2025-06-05 01:54:26,319 | INFO     | sum of deviations: -3647781761.0
[2025-06-05 01:54:40] 2025-06-05 01:54:26,319 | INFO     | mean x: 1749086311.5
[2025-06-05 01:54:40] 2025-06-05 01:54:26,319 | INFO     | mean y: 2730615.125
[2025-06-05 01:54:40] 2025-06-05 01:54:26,319 | INFO     | -- intersect: 78513238069.40715
[2025-06-05 01:54:40] 2025-06-05 01:54:26,319 | INFO     | intersect: 78513238069.40715
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | chi2: 0.012567165185078607
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | -- intersect: 78513238069.40715
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | current memory leak: -44.89 B/s (using 64 data points, chi2=0.01)
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | ..............................
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | . Timing measurements:
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | . get job = 0 s
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | . initial setup = 1 s
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | . payload setup = 2 s
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | . stage-in = 0 s
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | . payload execution = 4287 s
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | . stage-out = 1 s
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | . log creation = 0 s
[2025-06-05 01:54:40] 2025-06-05 01:54:26,320 | INFO     | ..............................
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | 
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | job summary report
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | --------------------------------------------------
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | PanDA job id: 6677675629
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | task id: 45006595
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | errors: (none)
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | pilot state: finished 
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | transexitcode: 0
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | exeerrorcode: 0
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | exeerrordiag: 
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | exitcode: 0
[2025-06-05 01:54:40] 2025-06-05 01:54:26,526 | INFO     | exitmsg: OK
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | cpuconsumptiontime: 20708 s
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | nevents: 400
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | neventsw: 0
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | pid: 2480466
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | pgrp: 2480466
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | corecount: 12
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | event service: False
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | sizes: {0: 2397251, 1: 2397571, 10: 2397599, 4293: 2423514, 4296: 2432501, 4297: 2432557, 4385: 2432855}
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | --------------------------------------------------
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | 
[2025-06-05 01:54:40] 2025-06-05 01:54:26,527 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 01:54:40] 2025-06-05 01:54:26,742 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,742 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,742 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,742 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | job 6677675629 has completed (purged errors)
[2025-06-05 01:54:40] 2025-06-05 01:54:26,743 | INFO     | overall cleanup function is called
[2025-06-05 01:54:40] 2025-06-05 01:54:27,754 | INFO     | --- collectZombieJob: --- 10, [2480466]
[2025-06-05 01:54:40] 2025-06-05 01:54:27,754 | INFO     | zombie collector waiting for pid 2480466
[2025-06-05 01:54:40] 2025-06-05 01:54:27,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:54:40] 2025-06-05 01:54:27,754 | INFO     | collected zombie processes
[2025-06-05 01:54:40] 2025-06-05 01:54:27,754 | INFO     | will attempt to kill all subprocesses of pid=2480466
[2025-06-05 01:54:40] 2025-06-05 01:54:27,868 | INFO     | process IDs to be killed: [2480466] (in reverse order)
[2025-06-05 01:54:40] 2025-06-05 01:54:27,966 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:54:40] 2025-06-05 01:54:27,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:54:40] 2025-06-05 01:54:27,968 | INFO     | did not find any defunct processes belonging to 2480466
[2025-06-05 01:54:40] 2025-06-05 01:54:27,974 | INFO     | did not find any defunct processes belonging to 2480466
[2025-06-05 01:54:40] 2025-06-05 01:54:27,974 | INFO     | ready for new job
[2025-06-05 01:54:40] 2025-06-05 01:54:27,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:54:40] 2025-06-05 01:54:27,975 | INFO     | **************************************
[2025-06-05 01:54:40] 2025-06-05 01:54:27,975 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:54:40] 2025-06-05 01:54:27,975 | INFO     | **************************************
[2025-06-05 01:54:40] 2025-06-05 01:54:27,975 | INFO     | 
[2025-06-05 01:54:40] 2025-06-05 01:54:27,998 | INFO     | architecture information:
[2025-06-05 01:54:40] 2025-06-05 01:54:27,998 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:54:40] 2025-06-05 01:54:28,050 | INFO     | cat /etc/os-release:
[2025-06-05 01:54:40] NAME="CentOS Linux"
[2025-06-05 01:54:40] VERSION="7 (Core)"
[2025-06-05 01:54:40] ID="centos"
[2025-06-05 01:54:40] ID_LIKE="rhel fedora"
[2025-06-05 01:54:40] VERSION_ID="7"
[2025-06-05 01:54:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:54:40] ANSI_COLOR="0;31"
[2025-06-05 01:54:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:54:40] HOME_URL="https://www.centos.org/"
[2025-06-05 01:54:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:54:40] 
[2025-06-05 01:54:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:54:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:54:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:54:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:54:40] 
[2025-06-05 01:54:40] 2025-06-05 01:54:28,050 | INFO     | **************************************
[2025-06-05 01:54:40] 2025-06-05 01:54:28,554 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 01:54:40] 2025-06-05 01:54:28,638 | INFO     | sufficient remaining disk space (182118776832 B)
[2025-06-05 01:54:40] 2025-06-05 01:54:28,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:54:40] 2025-06-05 01:54:28,638 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:54:40] 2025-06-05 01:54:28,638 | INFO     | update_server=False
[2025-06-05 01:54:40] 2025-06-05 01:54:28,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:54:40] 2025-06-05 01:54:28,638 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:54:40] 2025-06-05 01:54:28,639 | INFO     | aborting loop
[2025-06-05 01:54:40] 2025-06-05 01:54:28,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:54:40] 2025-06-05 01:54:28,994 | INFO     | all data control threads have been joined
[2025-06-05 01:54:40] 2025-06-05 01:54:29,082 | INFO     | all payload control threads have been joined
[2025-06-05 01:54:40] 2025-06-05 01:54:29,402 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:54:40] 2025-06-05 01:54:29,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:54:40] 2025-06-05 01:54:29,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:54:40] 2025-06-05 01:54:29,562 | INFO     | all job control threads have been joined
[2025-06-05 01:54:40] 2025-06-05 01:54:29,646 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:29,650 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:29,822 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:29,966 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,002 | INFO     | [data] control thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:54:40] 2025-06-05 01:54:30,090 | INFO     | [payload] control thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,098 | INFO     | [job] validate thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,230 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,322 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,450 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,514 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,570 | INFO     | [job] control thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,602 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:30,658 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:31,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:54:40] 2025-06-05 01:54:32,426 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:34,102 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:54:40] 2025-06-05 01:54:35,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719877498688)>', '<ExcThread(monitor, started 140719301850880)>']
[2025-06-05 01:54:40] 2025-06-05 01:54:35,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:54:40] 2025-06-05 01:54:35,446 | INFO     | [monitor] control thread has ended
[2025-06-05 01:54:40] 2025-06-05 01:54:40,394 | INFO     | all workflow threads have been joined
[2025-06-05 01:54:40] 2025-06-05 01:54:40,394 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:54:40] 2025-06-05 01:54:40,394 | INFO     | traces error code: 0
[2025-06-05 01:54:40] 2025-06-05 01:54:40,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:54:40] 2025-06-05 01:54:40,452 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:54:40] 2025-06-05 01:54:40,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:54:40] 2025-06-05 01:54:40,455 [wrapper] pilotpid: 2461230
[2025-06-05 01:54:40] 2025-06-05 01:54:40,457 [wrapper] Pilot exit status: 0
[2025-06-05 01:54:40] 2025-06-05 01:54:40,465 [wrapper] pandaids: 6677675629
[2025-06-05 01:54:40] 2025-06-05 01:54:40,483 [wrapper] cleanup supervisor_pilot 2515325 2461231
[2025-06-05 01:54:40] 2025-06-05 01:54:40,486 [wrapper] Test setup, not cleaning
[2025-06-05 01:54:40] 2025-06-05 01:54:40,487 [wrapper] apfmon messages muted
[2025-06-05 01:54:40] 2025-06-05 01:54:40,489 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:54:40] 2025-06-05 01:54:40,490 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:54:40]  *** Error codes and diagnostics ***
[2025-06-05 01:54:40]     "exeErrorCode": 0,
[2025-06-05 01:54:40]     "exeErrorDiag": "",
[2025-06-05 01:54:40]     "pilotErrorCode": 0,
[2025-06-05 01:54:40]     "pilotErrorDiag": "",
[2025-06-05 01:54:40]  *** Listing of results directory ***
[2025-06-05 01:54:40] total 387336
[2025-06-05 01:54:40] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:47 pilot3.tar.gz
[2025-06-05 01:54:40] -rw-r--r-- 1 boinc boinc      5111 Jun  3 14:51 queuedata.json
[2025-06-05 01:54:40] -rwx------ 1 boinc boinc     37140 Jun  3 14:51 runpilot2-wrapper.sh
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc       100 Jun  5 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:54:40] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:41 run_atlas
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc       105 Jun  5 00:41 job.xml
[2025-06-05 01:54:40] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:41 start_atlas.sh
[2025-06-05 01:54:40] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:41 shared
[2025-06-05 01:54:40] -rw-r--r-- 2 boinc boinc    508876 Jun  5 00:41 input.tar.gz
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc      9704 Jun  5 00:41 init_data.xml
[2025-06-05 01:54:40] -rw-r--r-- 2 boinc boinc 216096826 Jun  5 00:41 EVNT.45006593._001444.pool.root.1
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc         0 Jun  5 00:41 boinc_lockfile
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 00:41 pandaJob.out
[2025-06-05 01:54:40] -rw------- 1 boinc boinc    987117 Jun  5 00:41 agis_schedconf.cvmfs.json
[2025-06-05 01:54:40] -rw------- 1 boinc boinc   1598969 Jun  5 00:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:54:40] drwx------ 4 boinc boinc      4096 Jun  5 00:41 pilot3
[2025-06-05 01:54:40] -rw------- 1 boinc boinc 175109764 Jun  5 01:52 HITS.45006595._035929.pool.root.1
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc       530 Jun  5 01:52 boinc_task_state.xml
[2025-06-05 01:54:40] -rw------- 1 boinc boinc      1016 Jun  5 01:52 memory_monitor_summary.json
[2025-06-05 01:54:40] -rw------- 1 boinc boinc    346653 Jun  5 01:52 log.45006595._035929.job.log.tgz.1
[2025-06-05 01:54:40] -rw------- 1 boinc boinc        95 Jun  5 01:53 pilot_heartbeat.json
[2025-06-05 01:54:40] -rw------- 1 boinc boinc      7652 Jun  5 01:54 heartbeat.json
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc        27 Jun  5 01:54 wrapper_checkpoint.txt
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 01:54 boinc_mmap_file
[2025-06-05 01:54:40] -rw------- 1 boinc boinc      4377 Jun  5 01:54 pilotlog.txt
[2025-06-05 01:54:40] -rw------- 1 boinc boinc    447189 Jun  5 01:54 log.45006595._035929.job.log.1
[2025-06-05 01:54:40] -rw------- 1 boinc boinc       357 Jun  5 01:54 output.list
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc       620 Jun  5 01:54 runtime_log
[2025-06-05 01:54:40] -rw------- 1 boinc boinc    808960 Jun  5 01:54 result.tar.gz
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc      8953 Jun  5 01:54 runtime_log.err
[2025-06-05 01:54:40] -rw------- 1 boinc boinc       648 Jun  5 01:54 fscMDmHAig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrdkKDmo1PNUn.diag
[2025-06-05 01:54:40] -rw-rw-r-- 1 boinc boinc     22583 Jun  5 01:54 stderr.txt
[2025-06-05 01:54:40] HITS file was successfully produced:
[2025-06-05 01:54:40] -rw------- 1 boinc boinc 175109764 Jun  5 01:52 shared/HITS.pool.root.1
[2025-06-05 01:54:40]  *** Contents of shared directory: ***
[2025-06-05 01:54:40] total 383360
[2025-06-05 01:54:40] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:41 start_atlas.sh
[2025-06-05 01:54:40] -rw-r--r-- 2 boinc boinc    508876 Jun  5 00:41 input.tar.gz
[2025-06-05 01:54:40] -rw-r--r-- 2 boinc boinc 216096826 Jun  5 00:41 ATLAS.root_0
[2025-06-05 01:54:40] -rw------- 1 boinc boinc 175109764 Jun  5 01:52 HITS.pool.root.1
[2025-06-05 01:54:40] -rw------- 1 boinc boinc    808960 Jun  5 01:54 result.tar.gz
01:54:42 (2457477): run_atlas exited; CPU time 20722.466024
01:54:42 (2457477): called boinc_finish(0)

</stderr_txt>
]]>

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