Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:03 (4156094): wrapper (7.7.26015): starting
01:40:03 (4156094): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 01:40:03] Arguments: --nthreads 12
[2025-06-05 01:40:03] Threads: 12
[2025-06-05 01:40:03] Checking for CVMFS
[2025-06-05 01:40:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:40:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:40:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:40:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:40:03] 2.12.7.0 8354 9089 90524 146798 3 56 37828729 46080000 922 130560 0 11832397 99.996 1200036 37509 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-05 01:40:03] CVMFS is ok
[2025-06-05 01:40:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:40:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:40:03] Further information can be found at the LHC@home message board.
[2025-06-05 01:40:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:40:03] Checking for apptainer binary...
[2025-06-05 01:40:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:40:03] Running /usr/bin/apptainer --version
[2025-06-05 01:40:03] apptainer version 1.4.1-1.el9
[2025-06-05 01:40:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:40:03] minis01.farm.particle.cz
[2025-06-05 01:40:03] apptainer works
[2025-06-05 01:40:03] Set ATHENA_PROC_NUMBER=12
[2025-06-05 01:40:03] Set ATHENA_CORE_NUMBER=12
[2025-06-05 01:40:03] Starting ATLAS job with PandaID=6678285923
[2025-06-05 01:40:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:27:18]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:27:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 02:27:18]  is_altstaged=None
[2025-06-05 02:27:18]  is_tar=False
[2025-06-05 02:27:18]  lfn=log.45006595._051017.job.log.tgz.1
[2025-06-05 02:27:18]  mtime=0
[2025-06-05 02:27:18]  protocol_id=None
[2025-06-05 02:27:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 02:27:18]  replicas=None
[2025-06-05 02:27:18]  scope=mc23_13p6TeV
[2025-06-05 02:27:18]  status=None
[2025-06-05 02:27:18]  status_code=0
[2025-06-05 02:27:18]  storage_token=
[2025-06-05 02:27:18]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-6678285923/log.45006595._051017.job.log.tgz.1
[2025-06-05 02:27:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/ce/log.45006595._051017.job.log.tgz.1
[2025-06-05 02:27:18]  workdir=None
[2025-06-05 02:27:18] ]
[2025-06-05 02:27:18] 2025-06-05 00:26:51,489 | INFO     | transferring file log.45006595._051017.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-6678285923/log.45006595._051017.job.log.tgz.1 to /scratch/.boinc/slot
[2025-06-05 02:27:18] 2025-06-05 00:26:51,489 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-6678285923/log.45006595._051017.job.log.tgz.1 /scratch/.boinc/slots/2/log.45006595._051017.j
[2025-06-05 02:27:18] 2025-06-05 00:26:51,505 | INFO     | adding to output.list: log.45006595._051017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/ce/log.45006595._051017.job.log.tg
[2025-06-05 02:27:18] 2025-06-05 00:26:51,506 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 02:27:18] 2025-06-05 00:26:51,506 | INFO     | summary of transferred files:
[2025-06-05 02:27:18] 2025-06-05 00:26:51,506 | INFO     |  -- lfn=log.45006595._051017.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 02:27:18] 2025-06-05 00:26:51,506 | INFO     | stage-out finished correctly
[2025-06-05 02:27:18] 2025-06-05 00:26:53,797 | INFO     | monitor loop #215: job 0:6678285923 is in state 'finished'
[2025-06-05 02:27:18] 2025-06-05 00:26:53,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:27:18] 2025-06-05 00:26:54,656 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 02:27:18] 2025-06-05 00:26:54,746 | INFO     | job 6678285923 has state=finished
[2025-06-05 02:27:18] 2025-06-05 00:26:54,747 | INFO     | preparing for final server update for job 6678285923 in state='finished'
[2025-06-05 02:27:18] 2025-06-05 00:26:54,747 | INFO     | this job has now completed (state=finished)
[2025-06-05 02:27:18] 2025-06-05 00:26:54,747 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 02:27:18] 2025-06-05 00:26:54,747 | INFO     | log transfer has been attempted: DONE
[2025-06-05 02:27:18] 2025-06-05 00:26:54,748 | INFO     | job 6678285923 has finished - writing final server update
[2025-06-05 02:27:18] 2025-06-05 00:26:54,748 | INFO     | total number of processed events: 400 (read)
[2025-06-05 02:27:18] 2025-06-05 00:26:54,751 | INFO     | executing command: lscpu
[2025-06-05 02:27:18] 2025-06-05 00:26:54,786 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 02:27:18] 2025-06-05 00:26:56,301 | INFO     | monitor loop #216: job 0:6678285923 is in state 'finished'
[2025-06-05 02:27:18] 2025-06-05 00:26:56,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:27:18] 2025-06-05 00:26:57,617 | INFO     | PID=4159890 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 02:27:18] 2025-06-05 00:26:57,617 | INFO     | .. there are 2 such processes running
[2025-06-05 02:27:18] 2025-06-05 00:26:58,248 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 02:27:18] 2025-06-05 00:26:58,249 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6678285923/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:27:18] 2025-06-05 00:26:58,250 | INFO     | extracted standard info from prmon json
[2025-06-05 02:27:18] 2025-06-05 00:26:58,250 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:27:18] 2025-06-05 00:26:58,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:27:18] 2025-06-05 00:26:58,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:27:18] 2025-06-05 00:26:58,250 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:27:18] 2025-06-05 00:26:58,251 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:27:18] 2025-06-05 00:26:58,251 | INFO     | sum of square deviations: 18381740.0
[2025-06-05 02:27:18] 2025-06-05 00:26:58,251 | INFO     | sum of deviations: -2004966543.9999998
[2025-06-05 02:27:18] 2025-06-05 00:26:58,252 | INFO     | mean x: 1749081900.0
[2025-06-05 02:27:18] 2025-06-05 00:26:58,252 | INFO     | mean y: 2880378.1025641025
[2025-06-05 02:27:18] 2025-06-05 00:26:58,252 | INFO     | -- intersect: 190781919370.9266
[2025-06-05 02:27:18] 2025-06-05 00:26:58,252 | INFO     | intersect: 190781919370.9266
[2025-06-05 02:27:18] 2025-06-05 00:26:58,252 | INFO     | chi2: 0.04145379363977147
[2025-06-05 02:27:18] 2025-06-05 00:26:58,252 | INFO     | -- intersect: 190781919370.9266
[2025-06-05 02:27:18] 2025-06-05 00:26:58,252 | INFO     | current memory leak: -109.07 B/s (using 39 data points, chi2=0.04)
[2025-06-05 02:27:18] 2025-06-05 00:26:58,252 | INFO     | ..............................
[2025-06-05 02:27:18] 2025-06-05 00:26:58,252 | INFO     | . Timing measurements:
[2025-06-05 02:27:18] 2025-06-05 00:26:58,253 | INFO     | . get job = 0 s
[2025-06-05 02:27:18] 2025-06-05 00:26:58,253 | INFO     | . initial setup = 1 s
[2025-06-05 02:27:18] 2025-06-05 00:26:58,253 | INFO     | . payload setup = 5 s
[2025-06-05 02:27:18] 2025-06-05 00:26:58,253 | INFO     | . stage-in = 0 s
[2025-06-05 02:27:18] 2025-06-05 00:26:58,253 | INFO     | . payload execution = 2774 s
[2025-06-05 02:27:18] 2025-06-05 00:26:58,253 | INFO     | . stage-out = 0 s
[2025-06-05 02:27:18] 2025-06-05 00:26:58,253 | INFO     | . log creation = 0 s
[2025-06-05 02:27:18] 2025-06-05 00:26:58,253 | INFO     | ..............................
[2025-06-05 02:27:18] 2025-06-05 00:26:58,716 | INFO     | 
[2025-06-05 02:27:18] 2025-06-05 00:26:58,717 | INFO     | job summary report
[2025-06-05 02:27:18] 2025-06-05 00:26:58,717 | INFO     | --------------------------------------------------
[2025-06-05 02:27:18] 2025-06-05 00:26:58,717 | INFO     | PanDA job id: 6678285923
[2025-06-05 02:27:18] 2025-06-05 00:26:58,717 | INFO     | task id: 45006595
[2025-06-05 02:27:18] 2025-06-05 00:26:58,717 | INFO     | errors: (none)
[2025-06-05 02:27:18] 2025-06-05 00:26:58,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:27:18] 2025-06-05 00:26:58,718 | INFO     | pilot state: finished 
[2025-06-05 02:27:18] 2025-06-05 00:26:58,718 | INFO     | transexitcode: 0
[2025-06-05 02:27:18] 2025-06-05 00:26:58,718 | INFO     | exeerrorcode: 0
[2025-06-05 02:27:18] 2025-06-05 00:26:58,718 | INFO     | exeerrordiag: 
[2025-06-05 02:27:18] 2025-06-05 00:26:58,718 | INFO     | exitcode: 0
[2025-06-05 02:27:18] 2025-06-05 00:26:58,718 | INFO     | exitmsg: OK
[2025-06-05 02:27:18] 2025-06-05 00:26:58,718 | INFO     | cpuconsumptiontime: 28637 s
[2025-06-05 02:27:18] 2025-06-05 00:26:58,718 | INFO     | nevents: 400
[2025-06-05 02:27:18] 2025-06-05 00:26:58,719 | INFO     | neventsw: 0
[2025-06-05 02:27:18] 2025-06-05 00:26:58,719 | INFO     | pid: 4166648
[2025-06-05 02:27:18] 2025-06-05 00:26:58,719 | INFO     | pgrp: 4166648
[2025-06-05 02:27:18] 2025-06-05 00:26:58,719 | INFO     | corecount: 12
[2025-06-05 02:27:18] 2025-06-05 00:26:58,719 | INFO     | event service: False
[2025-06-05 02:27:18] 2025-06-05 00:26:58,719 | INFO     | sizes: {0: 2397343, 4: 2397549, 11: 2397577, 2783: 2422837, 2784: 2422836, 2785: 2431835, 2789: 2432019, 2792: 2432189}
[2025-06-05 02:27:18] 2025-06-05 00:26:58,719 | INFO     | --------------------------------------------------
[2025-06-05 02:27:18] 2025-06-05 00:26:58,719 | INFO     | 
[2025-06-05 02:27:18] 2025-06-05 00:26:58,719 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-06-05 02:27:18] 2025-06-05 00:26:58,736 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:27:18] 2025-06-05 00:26:58,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:27:18] 2025-06-05 00:26:58,739 | INFO     | job 6678285923 has completed (purged errors)
[2025-06-05 02:27:18] 2025-06-05 00:26:58,739 | INFO     | overall cleanup function is called
[2025-06-05 02:27:18] 2025-06-05 00:26:59,748 | INFO     | --- collectZombieJob: --- 10, [4166648]
[2025-06-05 02:27:18] 2025-06-05 00:26:59,749 | INFO     | zombie collector waiting for pid 4166648
[2025-06-05 02:27:18] 2025-06-05 00:26:59,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:27:18] 2025-06-05 00:26:59,749 | INFO     | collected zombie processes
[2025-06-05 02:27:18] 2025-06-05 00:26:59,749 | INFO     | will attempt to kill all subprocesses of pid=4166648
[2025-06-05 02:27:18] 2025-06-05 00:26:59,876 | INFO     | process IDs to be killed: [4166648] (in reverse order)
[2025-06-05 02:27:18] 2025-06-05 00:26:59,922 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:27:18] 2025-06-05 00:26:59,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:27:18] 2025-06-05 00:26:59,927 | INFO     | did not find any defunct processes belonging to 4166648
[2025-06-05 02:27:18] 2025-06-05 00:26:59,930 | INFO     | did not find any defunct processes belonging to 4166648
[2025-06-05 02:27:18] 2025-06-05 00:26:59,931 | INFO     | ready for new job
[2025-06-05 02:27:18] 2025-06-05 00:26:59,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:27:18] 2025-06-05 00:26:59,932 | INFO     | **************************************
[2025-06-05 02:27:18] 2025-06-05 00:26:59,932 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:27:18] 2025-06-05 00:26:59,932 | INFO     | **************************************
[2025-06-05 02:27:18] 2025-06-05 00:26:59,932 | INFO     | 
[2025-06-05 02:27:18] 2025-06-05 00:26:59,934 | INFO     | architecture information:
[2025-06-05 02:27:18] 2025-06-05 00:26:59,934 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:27:18] 2025-06-05 00:26:59,947 | INFO     | cat /etc/os-release:
[2025-06-05 02:27:18] NAME="CentOS Linux"
[2025-06-05 02:27:18] VERSION="7 (Core)"
[2025-06-05 02:27:18] ID="centos"
[2025-06-05 02:27:18] ID_LIKE="rhel fedora"
[2025-06-05 02:27:18] VERSION_ID="7"
[2025-06-05 02:27:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:27:18] ANSI_COLOR="0;31"
[2025-06-05 02:27:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:27:18] HOME_URL="https://www.centos.org/"
[2025-06-05 02:27:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:27:18] 
[2025-06-05 02:27:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:27:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:27:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:27:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:27:18] 
[2025-06-05 02:27:18] 2025-06-05 00:26:59,947 | INFO     | **************************************
[2025-06-05 02:27:18] 2025-06-05 00:27:00,450 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-06-05 02:27:18] 2025-06-05 00:27:00,463 | INFO     | sufficient remaining disk space (712342765568 B)
[2025-06-05 02:27:18] 2025-06-05 00:27:00,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:27:18] 2025-06-05 00:27:00,464 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:27:18] 2025-06-05 00:27:00,464 | INFO     | update_server=False
[2025-06-05 02:27:18] 2025-06-05 00:27:00,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:27:18] 2025-06-05 00:27:00,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:27:18] 2025-06-05 00:27:00,464 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:27:18] 2025-06-05 00:27:00,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:27:18] 2025-06-05 00:27:00,465 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:27:18] 2025-06-05 00:27:00,465 | INFO     | aborting loop
[2025-06-05 02:27:18] 2025-06-05 00:27:00,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:27:18] 2025-06-05 00:27:00,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:27:18] 2025-06-05 00:27:00,535 | INFO     | all payload control threads have been joined
[2025-06-05 02:27:18] 2025-06-05 00:27:00,590 | INFO     | all data control threads have been joined
[2025-06-05 02:27:18] 2025-06-05 00:27:00,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:27:18] 2025-06-05 00:27:01,469 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:01,471 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:01,505 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:01,541 | INFO     | [payload] control thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:01,593 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:01,596 | INFO     | [data] control thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:01,718 | INFO     | all job control threads have been joined
[2025-06-05 02:27:18] 2025-06-05 00:27:01,887 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:02,349 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:02,470 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:02,605 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:02,657 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:02,724 | INFO     | [job] control thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:02,773 | INFO     | [job] validate thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:03,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:27:18] 2025-06-05 00:27:04,342 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:04,758 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:11,047 | INFO     | job.realtimelogging is not enabled
[2025-06-05 02:27:18] 2025-06-05 00:27:12,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:27:18] 2025-06-05 00:27:13,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241683425088)>', '<ExcThread(monitor, started 140241193125632)>']
[2025-06-05 02:27:18] 2025-06-05 00:27:14,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:27:18] 2025-06-05 00:27:14,535 | INFO     | [monitor] control thread has ended
[2025-06-05 02:27:18] 2025-06-05 00:27:18,582 | INFO     | all workflow threads have been joined
[2025-06-05 02:27:18] 2025-06-05 00:27:18,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:27:18] 2025-06-05 00:27:18,582 | INFO     | traces error code: 0
[2025-06-05 02:27:18] 2025-06-05 00:27:18,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:27:18] 2025-06-05 00:27:18,684 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:27:18] 2025-06-05 00:27:18,686 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:27:18] 2025-06-05 00:27:18,689 [wrapper] pilotpid: 4159890
[2025-06-05 02:27:18] 2025-06-05 00:27:18,691 [wrapper] Pilot exit status: 0
[2025-06-05 02:27:18] 2025-06-05 00:27:18,701 [wrapper] pandaids: 6678285923
[2025-06-05 02:27:18] 2025-06-05 00:27:18,733 [wrapper] cleanup supervisor_pilot   25648 4159891
[2025-06-05 02:27:18] 2025-06-05 00:27:18,737 [wrapper] Test setup, not cleaning
[2025-06-05 02:27:18] 2025-06-05 00:27:18,739 [wrapper] apfmon messages muted
[2025-06-05 02:27:18] 2025-06-05 00:27:18,742 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:27:18] 2025-06-05 00:27:18,744 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:27:18]  *** Error codes and diagnostics ***
[2025-06-05 02:27:18]     "exeErrorCode": 0,
[2025-06-05 02:27:18]     "exeErrorDiag": "",
[2025-06-05 02:27:18]     "pilotErrorCode": 0,
[2025-06-05 02:27:18]     "pilotErrorDiag": "",
[2025-06-05 02:27:18]  *** Listing of results directory ***
[2025-06-05 02:27:18] total 389064
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-05 02:27:18] -rwx------ 1 boinc boinc     37140 Jun  4 05:01 runpilot2-wrapper.sh
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:01 queuedata.json
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:27:18] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:40 run_atlas
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:40 job.xml
[2025-06-05 02:27:18] -rw-r--r-- 2 boinc boinc 213884869 Jun  5 01:40 EVNT.45006593._002044.pool.root.1
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc      6523 Jun  5 01:40 init_data.xml
[2025-06-05 02:27:18] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:40 start_atlas.sh
[2025-06-05 02:27:18] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:40 shared
[2025-06-05 02:27:18] -rw-r--r-- 2 boinc boinc    508877 Jun  5 01:40 input.tar.gz
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:40 boinc_lockfile
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc      2525 Jun  5 01:40 pandaJob.out
[2025-06-05 02:27:18] -rw------- 1 boinc boinc    987117 Jun  5 01:40 agis_schedconf.cvmfs.json
[2025-06-05 02:27:18] -rw------- 1 boinc boinc   1598969 Jun  5 01:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:27:18] drwx------ 4 boinc boinc      4096 Jun  5 01:40 pilot3
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc       529 Jun  5 02:26 boinc_task_state.xml
[2025-06-05 02:27:18] -rw------- 1 boinc boinc 179389753 Jun  5 02:26 HITS.45006595._051017.pool.root.1
[2025-06-05 02:27:18] -rw------- 1 boinc boinc        95 Jun  5 02:26 pilot_heartbeat.json
[2025-06-05 02:27:18] -rw------- 1 boinc boinc      1012 Jun  5 02:26 memory_monitor_summary.json
[2025-06-05 02:27:18] -rw------- 1 boinc boinc    346782 Jun  5 02:26 log.45006595._051017.job.log.tgz.1
[2025-06-05 02:27:18] -rw------- 1 boinc boinc      7686 Jun  5 02:26 heartbeat.json
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc        27 Jun  5 02:27 wrapper_checkpoint.txt
[2025-06-05 02:27:18] -rw------- 1 boinc boinc      4550 Jun  5 02:27 pilotlog.txt
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc      8192 Jun  5 02:27 boinc_mmap_file
[2025-06-05 02:27:18] -rw------- 1 boinc boinc    300479 Jun  5 02:27 log.45006595._051017.job.log.1
[2025-06-05 02:27:18] -rw------- 1 boinc boinc       357 Jun  5 02:27 output.list
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc       620 Jun  5 02:27 runtime_log
[2025-06-05 02:27:18] -rw------- 1 boinc boinc    665600 Jun  5 02:27 result.tar.gz
[2025-06-05 02:27:18] -rw------- 1 boinc boinc       662 Jun  5 02:27 vseLDmXYtg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtYaKDm1RYsAn.diag
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc      8720 Jun  5 02:27 runtime_log.err
[2025-06-05 02:27:18] -rw-r--r-- 1 boinc boinc     21458 Jun  5 02:27 stderr.txt
[2025-06-05 02:27:18] HITS file was successfully produced:
[2025-06-05 02:27:18] -rw------- 1 boinc boinc 179389753 Jun  5 02:26 shared/HITS.pool.root.1
[2025-06-05 02:27:18]  *** Contents of shared directory: ***
[2025-06-05 02:27:18] total 385236
[2025-06-05 02:27:18] -rw-r--r-- 2 boinc boinc 213884869 Jun  5 01:40 ATLAS.root_0
[2025-06-05 02:27:18] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:40 start_atlas.sh
[2025-06-05 02:27:18] -rw-r--r-- 2 boinc boinc    508877 Jun  5 01:40 input.tar.gz
[2025-06-05 02:27:18] -rw------- 1 boinc boinc 179389753 Jun  5 02:26 HITS.pool.root.1
[2025-06-05 02:27:18] -rw------- 1 boinc boinc    665600 Jun  5 02:27 result.tar.gz
02:27:19 (4156094): run_atlas exited; CPU time 28653.724121
02:27:19 (4156094): called boinc_finish(0)

</stderr_txt>
]]>

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