Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:14:49 (1624598): wrapper (7.7.26015): starting
21:14:49 (1624598): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 21:14:49] Arguments: --nthreads 4
[2025-06-05 21:14:49] Threads: 4
[2025-06-05 21:14:49] Checking for CVMFS
[2025-06-05 21:14:49] No cvmfs_config command found, will try listing directly
[2025-06-05 21:14:49] CVMFS is ok
[2025-06-05 21:14:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 21:14:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 21:14:49] Further information can be found at the LHC@home message board.
[2025-06-05 21:14:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 21:14:49] Checking for apptainer binary...
[2025-06-05 21:14:49] which: no apptainer in ((null))
[2025-06-05 21:14:49] apptainer is not installed, using version from CVMFS
[2025-06-05 21:14:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 21:14:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-05 21:14:49] apptainer works
[2025-06-05 21:14:49] Set ATHENA_PROC_NUMBER=4
[2025-06-05 21:14:49] Set ATHENA_CORE_NUMBER=4
[2025-06-05 21:14:49] Starting ATLAS job with PandaID=6678244582
[2025-06-05 21:14:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 23:35:55]  *** The last 200 lines of the pilot log: ***
[2025-06-05 23:35:55] 2025-06-05 21:35:30,692 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6678244582/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:35:55] 2025-06-05 21:35:30,693 | INFO     | extracted standard info from prmon json
[2025-06-05 23:35:55] 2025-06-05 21:35:30,693 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 23:35:55] 2025-06-05 21:35:30,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 23:35:55] 2025-06-05 21:35:30,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 23:35:55] 2025-06-05 21:35:30,694 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 23:35:55] 2025-06-05 21:35:30,697 | INFO     | fitting pss+swap vs Time
[2025-06-05 23:35:55] 2025-06-05 21:35:30,697 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 23:35:55] 2025-06-05 21:35:30,698 | INFO     | sum of deviations: -299637062.99999905
[2025-06-05 23:35:55] 2025-06-05 21:35:30,698 | INFO     | mean x: 1749155115.5
[2025-06-05 23:35:55] 2025-06-05 21:35:30,698 | INFO     | mean y: 2305714.2463768115
[2025-06-05 23:35:55] 2025-06-05 21:35:30,698 | INFO     | -- intersect: 645483414.173683
[2025-06-05 23:35:55] 2025-06-05 21:35:30,698 | INFO     | intersect: 645483414.173683
[2025-06-05 23:35:55] 2025-06-05 21:35:30,699 | INFO     | chi2: 2.3404323793397497
[2025-06-05 23:35:55] 2025-06-05 21:35:30,699 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,700 | INFO     | sum of deviations: 8336796007.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,700 | INFO     | mean x: 1749154963.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,700 | INFO     | mean y: 2320686.984962406
[2025-06-05 23:35:55] 2025-06-05 21:35:30,700 | INFO     | -- intersect: -19987949637.17608
[2025-06-05 23:35:55] 2025-06-05 21:35:30,700 | INFO     | intersect: -19987949637.17608
[2025-06-05 23:35:55] 2025-06-05 21:35:30,700 | INFO     | chi2: 1.5511124240840233
[2025-06-05 23:35:55] 2025-06-05 21:35:30,700 | INFO     | current chi2=1.5511124240840233 (change=33.7253903263122 %)
[2025-06-05 23:35:55] 2025-06-05 21:35:30,701 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,701 | INFO     | sum of deviations: 8248689620.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,701 | INFO     | mean x: 1749154810.5
[2025-06-05 23:35:55] 2025-06-05 21:35:30,702 | INFO     | mean y: 2320517.296875
[2025-06-05 23:35:55] 2025-06-05 21:35:30,702 | INFO     | -- intersect: -22186355363.62106
[2025-06-05 23:35:55] 2025-06-05 21:35:30,702 | INFO     | intersect: -22186355363.62106
[2025-06-05 23:35:55] 2025-06-05 21:35:30,702 | INFO     | chi2: 1.5533863358500797
[2025-06-05 23:35:55] 2025-06-05 21:35:30,702 | INFO     | current chi2=1.5533863358500797 (change=-0.1465987720006313 %)
[2025-06-05 23:35:55] 2025-06-05 21:35:30,702 | INFO     | right removable region: 127
[2025-06-05 23:35:55] 2025-06-05 21:35:30,702 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,703 | INFO     | sum of deviations: -19373483551.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,703 | INFO     | mean x: 1749155268.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,703 | INFO     | mean y: 2339143.4511278197
[2025-06-05 23:35:55] 2025-06-05 21:35:30,704 | INFO     | -- intersect: 46456785253.22531
[2025-06-05 23:35:55] 2025-06-05 21:35:30,704 | INFO     | intersect: 46456785253.22531
[2025-06-05 23:35:55] 2025-06-05 21:35:30,704 | INFO     | chi2: 0.8363998265118967
[2025-06-05 23:35:55] 2025-06-05 21:35:30,704 | INFO     | current chi2=0.8363998265118967 (change=64.26302105990132 %)
[2025-06-05 23:35:55] 2025-06-05 21:35:30,704 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,705 | INFO     | sum of deviations: -18337747532.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,705 | INFO     | mean x: 1749155420.5
[2025-06-05 23:35:55] 2025-06-05 21:35:30,705 | INFO     | mean y: 2337145.640625
[2025-06-05 23:35:55] 2025-06-05 21:35:30,705 | INFO     | -- intersect: 49330230061.622215
[2025-06-05 23:35:55] 2025-06-05 21:35:30,706 | INFO     | intersect: 49330230061.622215
[2025-06-05 23:35:55] 2025-06-05 21:35:30,706 | INFO     | chi2: 0.8365910661202304
[2025-06-05 23:35:55] 2025-06-05 21:35:30,706 | INFO     | current chi2=0.8365910661202304 (change=-0.022864615973345232 %)
[2025-06-05 23:35:55] 2025-06-05 21:35:30,706 | INFO     | left removable region: 20
[2025-06-05 23:35:55] 2025-06-05 21:35:30,707 | INFO     | sum of square deviations: 379832238.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,707 | INFO     | sum of deviations: -6859302563.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,707 | INFO     | mean x: 1749155390.0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,707 | INFO     | mean y: 2350406.1775700934
[2025-06-05 23:35:55] 2025-06-05 21:35:30,707 | INFO     | -- intersect: 31589943162.62039
[2025-06-05 23:35:55] 2025-06-05 21:35:30,707 | INFO     | intersect: 31589943162.62039
[2025-06-05 23:35:55] 2025-06-05 21:35:30,708 | INFO     | chi2: 0.010181336109195657
[2025-06-05 23:35:55] 2025-06-05 21:35:30,708 | INFO     | -- intersect: 31589943162.62039
[2025-06-05 23:35:55] 2025-06-05 21:35:30,708 | INFO     | current memory leak: -18.06 B/s (using 107 data points, chi2=0.01)
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | ..............................
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | . Timing measurements:
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | . get job = 0 s
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | . initial setup = 1 s
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | . payload setup = 9 s
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | . stage-in = 0 s
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | . payload execution = 8386 s
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | . stage-out = 1 s
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | . log creation = 0 s
[2025-06-05 23:35:55] 2025-06-05 21:35:30,709 | INFO     | ..............................
[2025-06-05 23:35:55] 2025-06-05 21:35:30,804 | INFO     | 
[2025-06-05 23:35:55] 2025-06-05 21:35:30,804 | INFO     | job summary report
[2025-06-05 23:35:55] 2025-06-05 21:35:30,804 | INFO     | --------------------------------------------------
[2025-06-05 23:35:55] 2025-06-05 21:35:30,804 | INFO     | PanDA job id: 6678244582
[2025-06-05 23:35:55] 2025-06-05 21:35:30,804 | INFO     | task id: 45006595
[2025-06-05 23:35:55] 2025-06-05 21:35:30,804 | INFO     | errors: (none)
[2025-06-05 23:35:55] 2025-06-05 21:35:30,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | pilot state: finished 
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | transexitcode: 0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | exeerrorcode: 0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | exeerrordiag: 
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | exitcode: 0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | exitmsg: OK
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | cpuconsumptiontime: 31599 s
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | nevents: 400
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | neventsw: 0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | pid: 1636954
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | pgrp: 1636954
[2025-06-05 23:35:55] 2025-06-05 21:35:30,805 | INFO     | corecount: 4
[2025-06-05 23:35:55] 2025-06-05 21:35:30,806 | INFO     | event service: False
[2025-06-05 23:35:55] 2025-06-05 21:35:30,806 | INFO     | sizes: {0: 2397354, 7: 2397560, 11: 2397588, 8400: 2425743, 8402: 2434708, 8404: 2434764, 8411: 2435062}
[2025-06-05 23:35:55] 2025-06-05 21:35:30,806 | INFO     | --------------------------------------------------
[2025-06-05 23:35:55] 2025-06-05 21:35:30,806 | INFO     | 
[2025-06-05 23:35:55] 2025-06-05 21:35:30,806 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-06-05 23:35:55] 2025-06-05 21:35:30,838 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,838 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,838 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,838 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,840 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,840 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 23:35:55] 2025-06-05 21:35:30,840 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,840 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 23:35:55] 2025-06-05 21:35:30,840 | INFO     | job 6678244582 has completed (purged errors)
[2025-06-05 23:35:55] 2025-06-05 21:35:30,840 | INFO     | overall cleanup function is called
[2025-06-05 23:35:55] 2025-06-05 21:35:31,849 | INFO     | --- collectZombieJob: --- 10, [1636954]
[2025-06-05 23:35:55] 2025-06-05 21:35:31,849 | INFO     | zombie collector waiting for pid 1636954
[2025-06-05 23:35:55] 2025-06-05 21:35:31,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 23:35:55] 2025-06-05 21:35:31,849 | INFO     | collected zombie processes
[2025-06-05 23:35:55] 2025-06-05 21:35:31,850 | INFO     | will attempt to kill all subprocesses of pid=1636954
[2025-06-05 23:35:55] 2025-06-05 21:35:32,509 | INFO     | process IDs to be killed: [1636954] (in reverse order)
[2025-06-05 23:35:55] 2025-06-05 21:35:32,752 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 23:35:55] 2025-06-05 21:35:32,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 23:35:55] 2025-06-05 21:35:32,782 | INFO     | did not find any defunct processes belonging to 1636954
[2025-06-05 23:35:55] 2025-06-05 21:35:32,808 | INFO     | did not find any defunct processes belonging to 1636954
[2025-06-05 23:35:55] 2025-06-05 21:35:32,808 | INFO     | ready for new job
[2025-06-05 23:35:55] 2025-06-05 21:35:32,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 23:35:55] 2025-06-05 21:35:32,810 | INFO     | **************************************
[2025-06-05 23:35:55] 2025-06-05 21:35:32,811 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 23:35:55] 2025-06-05 21:35:32,811 | INFO     | **************************************
[2025-06-05 23:35:55] 2025-06-05 21:35:32,811 | INFO     | 
[2025-06-05 23:35:55] 2025-06-05 21:35:32,819 | INFO     | architecture information:
[2025-06-05 23:35:55] 2025-06-05 21:35:32,819 | INFO     | executing command: cat /etc/os-release
[2025-06-05 23:35:55] 2025-06-05 21:35:32,845 | INFO     | cat /etc/os-release:
[2025-06-05 23:35:55] NAME="CentOS Linux"
[2025-06-05 23:35:55] VERSION="7 (Core)"
[2025-06-05 23:35:55] ID="centos"
[2025-06-05 23:35:55] ID_LIKE="rhel fedora"
[2025-06-05 23:35:55] VERSION_ID="7"
[2025-06-05 23:35:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 23:35:55] ANSI_COLOR="0;31"
[2025-06-05 23:35:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 23:35:55] HOME_URL="https://www.centos.org/"
[2025-06-05 23:35:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 23:35:55] 
[2025-06-05 23:35:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 23:35:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 23:35:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 23:35:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 23:35:55] 
[2025-06-05 23:35:55] 2025-06-05 21:35:32,846 | INFO     | **************************************
[2025-06-05 23:35:55] 2025-06-05 21:35:33,349 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-06-05 23:35:55] 2025-06-05 21:35:33,376 | INFO     | sufficient remaining disk space (3260626763776 B)
[2025-06-05 23:35:55] 2025-06-05 21:35:33,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 23:35:55] 2025-06-05 21:35:33,376 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 23:35:55] 2025-06-05 21:35:33,376 | INFO     | update_server=False
[2025-06-05 23:35:55] 2025-06-05 21:35:33,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 23:35:55] 2025-06-05 21:35:33,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:35:55] 2025-06-05 21:35:33,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 23:35:55] 2025-06-05 21:35:33,378 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 23:35:55] 2025-06-05 21:35:33,378 | INFO     | aborting loop
[2025-06-05 23:35:55] 2025-06-05 21:35:33,378 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 23:35:55] 2025-06-05 21:35:33,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 23:35:55] 2025-06-05 21:35:33,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 23:35:55] 2025-06-05 21:35:33,959 | INFO     | all data control threads have been joined
[2025-06-05 23:35:55] 2025-06-05 21:35:34,373 | INFO     | all payload control threads have been joined
[2025-06-05 23:35:55] 2025-06-05 21:35:34,382 | INFO     | [job] retrieve thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:34,384 | INFO     | [job] job monitor thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:34,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:34,695 | INFO     | [payload] failed_post thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:34,715 | INFO     | [job] validate thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:34,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 23:35:55] 2025-06-05 21:35:34,953 | INFO     | all job control threads have been joined
[2025-06-05 23:35:55] 2025-06-05 21:35:34,964 | INFO     | [data] control thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:35,012 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:35,300 | INFO     | [payload] validate_post thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:35,317 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:35,378 | INFO     | [payload] control thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:35,383 | INFO     | [data] copytool_out thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:35,472 | INFO     | [data] copytool_in thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:35,680 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:35,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:35:55] 2025-06-05 21:35:35,958 | INFO     | [job] control thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:36,818 | INFO     | [job] queue monitor thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:38,768 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 23:35:55] 2025-06-05 21:35:39,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22788391089984)>', '<ExcThread(monitor, started 22787949315840)>']
[2025-06-05 23:35:55] 2025-06-05 21:35:39,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 23:35:55] 2025-06-05 21:35:39,409 | INFO     | [monitor] control thread has ended
[2025-06-05 23:35:55] 2025-06-05 21:35:44,430 | INFO     | all workflow threads have been joined
[2025-06-05 23:35:55] 2025-06-05 21:35:44,430 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 23:35:55] 2025-06-05 21:35:44,430 | INFO     | traces error code: 0
[2025-06-05 23:35:55] 2025-06-05 21:35:44,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 23:35:55] 2025-06-05 21:35:44,585 [wrapper] ==== pilot stdout END ====
[2025-06-05 23:35:55] 2025-06-05 21:35:44,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 23:35:55] 2025-06-05 21:35:44,593 [wrapper] pilotpid: 1628816
[2025-06-05 23:35:55] 2025-06-05 21:35:44,597 [wrapper] Pilot exit status: 0
[2025-06-05 23:35:55] 2025-06-05 21:35:44,611 [wrapper] pandaids: 6678244582
[2025-06-05 23:35:55] 2025-06-05 21:35:44,758 [wrapper] cleanup supervisor_pilot 2131123 1628817
[2025-06-05 23:35:55] 2025-06-05 21:35:44,762 [wrapper] Test setup, not cleaning
[2025-06-05 23:35:55] 2025-06-05 21:35:44,766 [wrapper] apfmon messages muted
[2025-06-05 23:35:55] 2025-06-05 21:35:44,769 [wrapper] ==== wrapper stdout END ====
[2025-06-05 23:35:55] 2025-06-05 21:35:44,772 [wrapper] ==== wrapper stderr END ====
[2025-06-05 23:35:55]  *** Error codes and diagnostics ***
[2025-06-05 23:35:55]     "exeErrorCode": 0,
[2025-06-05 23:35:55]     "exeErrorDiag": "",
[2025-06-05 23:35:55]     "pilotErrorCode": 0,
[2025-06-05 23:35:55]     "pilotErrorDiag": "",
[2025-06-05 23:35:55]  *** Listing of results directory ***
[2025-06-05 23:35:55] total 395940
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:59 pilot3.tar.gz
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:03 queuedata.json
[2025-06-05 23:35:55] -rwx------ 1 boinc boinc     37140 Jun  4 03:03 runpilot2-wrapper.sh
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc       100 Jun  5 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 23:35:55] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 21:14 run_atlas
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc       105 Jun  5 21:14 job.xml
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc      6687 Jun  5 21:14 init_data.xml
[2025-06-05 23:35:55] -rw-r--r-- 2 boinc boinc 218031211 Jun  5 21:14 EVNT.45006593._001988.pool.root.1
[2025-06-05 23:35:55] -rw-r--r-- 2 boinc boinc     15093 Jun  5 21:14 start_atlas.sh
[2025-06-05 23:35:55] drwxrwx--x 2 boinc boinc      4096 Jun  5 21:14 shared
[2025-06-05 23:35:55] -rw-r--r-- 2 boinc boinc    508885 Jun  5 21:14 input.tar.gz
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc         0 Jun  5 21:14 boinc_lockfile
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc      2525 Jun  5 21:14 pandaJob.out
[2025-06-05 23:35:55] -rw------- 1 boinc boinc    987543 Jun  5 21:15 agis_schedconf.cvmfs.json
[2025-06-05 23:35:55] -rw------- 1 boinc boinc   1598969 Jun  5 21:15 agis_ddmendpoints.agis.ALL.json
[2025-06-05 23:35:55] drwx------ 4 boinc boinc      4096 Jun  5 21:15 pilot3
[2025-06-05 23:35:55] -rw------- 1 boinc boinc 181415318 Jun  5 23:34 HITS.45006595._049587.pool.root.1
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc       528 Jun  5 23:34 boinc_task_state.xml
[2025-06-05 23:35:55] -rw------- 1 boinc boinc        95 Jun  5 23:34 pilot_heartbeat.json
[2025-06-05 23:35:55] -rw------- 1 boinc boinc      1030 Jun  5 23:35 memory_monitor_summary.json
[2025-06-05 23:35:55] -rw------- 1 boinc boinc    282715 Jun  5 23:35 log.45006595._049587.job.log.tgz.1
[2025-06-05 23:35:55] -rw------- 1 boinc boinc      7702 Jun  5 23:35 heartbeat.json
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc      8192 Jun  5 23:35 boinc_mmap_file
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc        26 Jun  5 23:35 wrapper_checkpoint.txt
[2025-06-05 23:35:55] -rw------- 1 boinc boinc      4488 Jun  5 23:35 pilotlog.txt
[2025-06-05 23:35:55] -rw------- 1 boinc boinc    796132 Jun  5 23:35 log.45006595._049587.job.log.1
[2025-06-05 23:35:55] -rw------- 1 boinc boinc       357 Jun  5 23:35 output.list
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc       620 Jun  5 23:35 runtime_log
[2025-06-05 23:35:55] -rw------- 1 boinc boinc   1095680 Jun  5 23:35 result.tar.gz
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc      9040 Jun  5 23:35 runtime_log.err
[2025-06-05 23:35:55] -rw------- 1 boinc boinc       662 Jun  5 23:35 YFANDmVirg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFRaKDm65EDfm.diag
[2025-06-05 23:35:55] -rw-r--r-- 1 boinc boinc     20619 Jun  5 23:35 stderr.txt
[2025-06-05 23:35:55] HITS file was successfully produced:
[2025-06-05 23:35:55] -rw------- 1 boinc boinc 181415318 Jun  5 23:34 shared/HITS.pool.root.1
[2025-06-05 23:35:55]  *** Contents of shared directory: ***
[2025-06-05 23:35:55] total 391684
[2025-06-05 23:35:55] -rw-r--r-- 2 boinc boinc 218031211 Jun  5 21:14 ATLAS.root_0
[2025-06-05 23:35:55] -rw-r--r-- 2 boinc boinc     15093 Jun  5 21:14 start_atlas.sh
[2025-06-05 23:35:55] -rw-r--r-- 2 boinc boinc    508885 Jun  5 21:14 input.tar.gz
[2025-06-05 23:35:55] -rw------- 1 boinc boinc 181415318 Jun  5 23:34 HITS.pool.root.1
[2025-06-05 23:35:55] -rw------- 1 boinc boinc   1095680 Jun  5 23:35 result.tar.gz
23:35:57 (1624598): run_atlas exited; CPU time 32080.767439
23:35:57 (1624598): called boinc_finish(0)

</stderr_txt>
]]>

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