Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:41:18 (1745577): wrapper (7.7.26015): starting
20:41:18 (1745577): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 20:41:18] Arguments: --nthreads 3
[2025-06-04 20:41:18] Threads: 3
[2025-06-04 20:41:18] Checking for CVMFS
[2025-06-04 20:41:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:41:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:41:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:41:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:41:18] 2.9.2.0 902724 2841 70284 146791 3 56 29399310 36864001 0 130560 0 2273555 99.991 680683 43519 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 20:41:18] CVMFS is ok
[2025-06-04 20:41:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:41:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:41:18] Further information can be found at the LHC@home message board.
[2025-06-04 20:41:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:41:18] Checking for apptainer binary...
[2025-06-04 20:41:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:41:18] Running /usr/bin/apptainer --version
[2025-06-04 20:41:18] apptainer version 1.3.6-6.1
[2025-06-04 20:41:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:41:19] thA383
[2025-06-04 20:41:19] apptainer works
[2025-06-04 20:41:19] Set ATHENA_PROC_NUMBER=3
[2025-06-04 20:41:19] Set ATHENA_CORE_NUMBER=3
[2025-06-04 20:41:19] Starting ATLAS job with PandaID=6678286616
[2025-06-04 20:41:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:05:32]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:05:32]  status_code=0
[2025-06-04 22:05:32]  storage_token=
[2025-06-04 22:05:32]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678286616/log.45006595._051529.job.log.tgz.1
[2025-06-04 22:05:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/5f/log.45006595._051529.job.log.tgz.1
[2025-06-04 22:05:32]  workdir=None
[2025-06-04 22:05:32] ]
[2025-06-04 22:05:32] 2025-06-04 20:05:02,039 | INFO     | transferring file log.45006595._051529.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678286616/log.45006595._051529.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 22:05:32] 2025-06-04 20:05:02,039 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678286616/log.45006595._051529.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0515
[2025-06-04 22:05:32] 2025-06-04 20:05:02,052 | INFO     | adding to output.list: log.45006595._051529.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/5f/log.45006595._051529.job.log.tg
[2025-06-04 22:05:32] 2025-06-04 20:05:02,053 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 22:05:32] 2025-06-04 20:05:02,053 | INFO     | summary of transferred files:
[2025-06-04 22:05:32] 2025-06-04 20:05:02,053 | INFO     |  -- lfn=log.45006595._051529.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 22:05:32] 2025-06-04 20:05:02,053 | INFO     | stage-out finished correctly
[2025-06-04 22:05:32] 2025-06-04 20:05:03,938 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 22:05:32] 2025-06-04 20:05:03,971 | INFO     | job 6678286616 has state=finished
[2025-06-04 22:05:32] 2025-06-04 20:05:03,971 | INFO     | preparing for final server update for job 6678286616 in state='finished'
[2025-06-04 22:05:32] 2025-06-04 20:05:03,971 | INFO     | this job has now completed (state=finished)
[2025-06-04 22:05:32] 2025-06-04 20:05:03,971 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 22:05:32] 2025-06-04 20:05:03,971 | INFO     | log transfer has been attempted: DONE
[2025-06-04 22:05:32] 2025-06-04 20:05:03,971 | INFO     | job 6678286616 has finished - writing final server update
[2025-06-04 22:05:32] 2025-06-04 20:05:03,972 | INFO     | total number of processed events: 400 (read)
[2025-06-04 22:05:32] 2025-06-04 20:05:03,972 | INFO     | executing command: lscpu
[2025-06-04 22:05:32] 2025-06-04 20:05:03,987 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 22:05:32] 2025-06-04 20:05:07,955 | WARNING  | process 1755723 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 22:05:32] 2025-06-04 20:05:07,955 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678286616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:05:32] 2025-06-04 20:05:07,956 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678286616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:05:32] 2025-06-04 20:05:07,956 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2654596 B
[2025-06-04 22:05:32] 2025-06-04 20:05:07,956 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16036 B
[2025-06-04 22:05:32] 2025-06-04 20:05:07,957 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 22:05:32] 2025-06-04 20:05:08,830 | INFO     | PID=1749226 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 22:05:32] 2025-06-04 20:05:11,642 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 22:05:32] 2025-06-04 20:05:11,643 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678286616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,643 | INFO     | extracted standard info from prmon json
[2025-06-04 22:05:32] 2025-06-04 20:05:11,643 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:05:32] 2025-06-04 20:05:11,643 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:05:32] 2025-06-04 20:05:11,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:05:32] 2025-06-04 20:05:11,646 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | sum of square deviations: 130793150.0
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | sum of deviations: -12876532090.0
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | mean x: 1749065079.0
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | mean y: 2465694.44
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | -- intersect: 172197206911.71237
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | intersect: 172197206911.71237
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | chi2: 0.07619644964777783
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | -- intersect: 172197206911.71237
[2025-06-04 22:05:32] 2025-06-04 20:05:11,647 | INFO     | current memory leak: -98.45 B/s (using 75 data points, chi2=0.08)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | ..............................
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | . Timing measurements:
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | . get job = 0 s
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | . initial setup = 1 s
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | . payload setup = 7 s
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | . stage-in = 0 s
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | . payload execution = 4984 s
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | . stage-out = 0 s
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | . log creation = 0 s
[2025-06-04 22:05:32] 2025-06-04 20:05:11,648 | INFO     | ..............................
[2025-06-04 22:05:32] 2025-06-04 20:05:11,672 | INFO     | sufficient remaining disk space (828557492224 B)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,682 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,682 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6678286616: 2953342 B (within 2537553920 B limit)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,682 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6678286616/HITS.45006595._051529.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,682 | INFO     | total size of present files: 0 B (workdir size: 2953342 B)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,682 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6678286616/HITS.45006595._051529.pool.root.1 since it does not exist
[2025-06-04 22:05:32] 2025-06-04 20:05:11,721 | INFO     | number of running child processes to parent process 1755723: 1
[2025-06-04 22:05:32] 2025-06-04 20:05:11,721 | INFO     | maximum number of monitored processes: 6
[2025-06-04 22:05:32] 2025-06-04 20:05:11,721 | INFO     | aborting job monitoring since job object (job id=6678286616) has expired
[2025-06-04 22:05:32] 2025-06-04 20:05:11,824 | INFO     | 
[2025-06-04 22:05:32] 2025-06-04 20:05:11,825 | INFO     | job summary report
[2025-06-04 22:05:32] 2025-06-04 20:05:11,825 | INFO     | --------------------------------------------------
[2025-06-04 22:05:32] 2025-06-04 20:05:11,825 | INFO     | PanDA job id: 6678286616
[2025-06-04 22:05:32] 2025-06-04 20:05:11,825 | INFO     | task id: 45006595
[2025-06-04 22:05:32] 2025-06-04 20:05:11,825 | INFO     | errors: (none)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,826 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:05:32] 2025-06-04 20:05:11,826 | INFO     | pilot state: finished 
[2025-06-04 22:05:32] 2025-06-04 20:05:11,826 | INFO     | transexitcode: 0
[2025-06-04 22:05:32] 2025-06-04 20:05:11,826 | INFO     | exeerrorcode: 0
[2025-06-04 22:05:32] 2025-06-04 20:05:11,826 | INFO     | exeerrordiag: 
[2025-06-04 22:05:32] 2025-06-04 20:05:11,826 | INFO     | exitcode: 0
[2025-06-04 22:05:32] 2025-06-04 20:05:11,826 | INFO     | exitmsg: OK
[2025-06-04 22:05:32] 2025-06-04 20:05:11,827 | INFO     | cpuconsumptiontime: 14228 s
[2025-06-04 22:05:32] 2025-06-04 20:05:11,827 | INFO     | nevents: 400
[2025-06-04 22:05:32] 2025-06-04 20:05:11,827 | INFO     | neventsw: 0
[2025-06-04 22:05:32] 2025-06-04 20:05:11,827 | INFO     | pid: 1755723
[2025-06-04 22:05:32] 2025-06-04 20:05:11,827 | INFO     | pgrp: 1755723
[2025-06-04 22:05:32] 2025-06-04 20:05:11,827 | INFO     | corecount: 3
[2025-06-04 22:05:32] 2025-06-04 20:05:11,827 | INFO     | event service: False
[2025-06-04 22:05:32] 2025-06-04 20:05:11,828 | INFO     | sizes: {0: 2397345, 6: 2397551, 10: 2397579, 4995: 2423831, 4996: 2432833, 4998: 2432833, 5006: 2433131}
[2025-06-04 22:05:32] 2025-06-04 20:05:11,828 | INFO     | --------------------------------------------------
[2025-06-04 22:05:32] 2025-06-04 20:05:11,828 | INFO     | 
[2025-06-04 22:05:32] 2025-06-04 20:05:11,828 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 22:05:32] 2025-06-04 20:05:11,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,874 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,875 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,876 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:05:32] 2025-06-04 20:05:11,876 | INFO     | job 6678286616 has completed (purged errors)
[2025-06-04 22:05:32] 2025-06-04 20:05:11,876 | INFO     | overall cleanup function is called
[2025-06-04 22:05:32] 2025-06-04 20:05:12,885 | INFO     | --- collectZombieJob: --- 10, [1755723]
[2025-06-04 22:05:32] 2025-06-04 20:05:12,886 | INFO     | zombie collector waiting for pid 1755723
[2025-06-04 22:05:32] 2025-06-04 20:05:12,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:05:32] 2025-06-04 20:05:12,886 | INFO     | collected zombie processes
[2025-06-04 22:05:32] 2025-06-04 20:05:12,886 | INFO     | will attempt to kill all subprocesses of pid=1755723
[2025-06-04 22:05:32] 2025-06-04 20:05:12,926 | INFO     | process IDs to be killed: [1755723] (in reverse order)
[2025-06-04 22:05:32] 2025-06-04 20:05:12,952 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:05:32] 2025-06-04 20:05:12,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:05:32] 2025-06-04 20:05:12,953 | INFO     | did not find any defunct processes belonging to 1755723
[2025-06-04 22:05:32] 2025-06-04 20:05:12,954 | INFO     | did not find any defunct processes belonging to 1755723
[2025-06-04 22:05:32] 2025-06-04 20:05:12,954 | INFO     | ready for new job
[2025-06-04 22:05:32] 2025-06-04 20:05:12,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:05:32] 2025-06-04 20:05:12,955 | INFO     | **************************************
[2025-06-04 22:05:32] 2025-06-04 20:05:12,955 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:05:32] 2025-06-04 20:05:12,955 | INFO     | **************************************
[2025-06-04 22:05:32] 2025-06-04 20:05:12,955 | INFO     | 
[2025-06-04 22:05:32] 2025-06-04 20:05:12,955 | INFO     | architecture information:
[2025-06-04 22:05:32] 2025-06-04 20:05:12,956 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:05:32] 2025-06-04 20:05:12,966 | INFO     | cat /etc/os-release:
[2025-06-04 22:05:32] NAME="CentOS Linux"
[2025-06-04 22:05:32] VERSION="7 (Core)"
[2025-06-04 22:05:32] ID="centos"
[2025-06-04 22:05:32] ID_LIKE="rhel fedora"
[2025-06-04 22:05:32] VERSION_ID="7"
[2025-06-04 22:05:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:05:32] ANSI_COLOR="0;31"
[2025-06-04 22:05:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:05:32] HOME_URL="https://www.centos.org/"
[2025-06-04 22:05:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:05:32] 
[2025-06-04 22:05:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:05:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:05:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:05:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:05:32] 
[2025-06-04 22:05:32] 2025-06-04 20:05:12,966 | INFO     | **************************************
[2025-06-04 22:05:32] 2025-06-04 20:05:13,470 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | INFO     | sufficient remaining disk space (828561686528 B)
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | INFO     | update_server=False
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | INFO     | aborting loop
[2025-06-04 22:05:32] 2025-06-04 20:05:13,484 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 22:05:32] 2025-06-04 20:05:13,485 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:05:32] 2025-06-04 20:05:13,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:05:32] 2025-06-04 20:05:13,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:05:32] 2025-06-04 20:05:13,656 | INFO     | all data control threads have been joined
[2025-06-04 22:05:32] 2025-06-04 20:05:14,308 | INFO     | all payload control threads have been joined
[2025-06-04 22:05:32] 2025-06-04 20:05:14,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:05:32] 2025-06-04 20:05:14,490 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:14,490 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:14,491 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:14,554 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:14,561 | INFO     | all job control threads have been joined
[2025-06-04 22:05:32] 2025-06-04 20:05:14,662 | INFO     | [data] control thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:15,055 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:15,314 | INFO     | [payload] control thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:15,490 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:15,567 | INFO     | [job] control thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:15,588 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:15,717 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:15,778 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:15,870 | INFO     | [job] validate thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:15,919 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:18,492 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:24,287 | INFO     | job.realtimelogging is not enabled
[2025-06-04 22:05:32] 2025-06-04 20:05:25,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:05:32] 2025-06-04 20:05:26,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591720265536)>', '<ExcThread(monitor, started 140591232960256)>']
[2025-06-04 22:05:32] 2025-06-04 20:05:27,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:05:32] 2025-06-04 20:05:27,557 | INFO     | [monitor] control thread has ended
[2025-06-04 22:05:32] 2025-06-04 20:05:32,003 | INFO     | all workflow threads have been joined
[2025-06-04 22:05:32] 2025-06-04 20:05:32,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:05:32] 2025-06-04 20:05:32,004 | INFO     | traces error code: 0
[2025-06-04 22:05:32] 2025-06-04 20:05:32,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:05:32] 2025-06-04 20:05:32,054 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:05:32] 2025-06-04 20:05:32,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:05:32] 2025-06-04 20:05:32,060 [wrapper] pilotpid: 1749226
[2025-06-04 22:05:32] 2025-06-04 20:05:32,063 [wrapper] Pilot exit status: 0
[2025-06-04 22:05:32] 2025-06-04 20:05:32,071 [wrapper] pandaids: 6678286616
[2025-06-04 22:05:32] 2025-06-04 20:05:32,086 [wrapper] cleanup supervisor_pilot 1767822 1749227
[2025-06-04 22:05:32] 2025-06-04 20:05:32,089 [wrapper] Test setup, not cleaning
[2025-06-04 22:05:32] 2025-06-04 20:05:32,091 [wrapper] apfmon messages muted
[2025-06-04 22:05:32] 2025-06-04 20:05:32,094 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:05:32] 2025-06-04 20:05:32,097 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:05:32]  *** Error codes and diagnostics ***
[2025-06-04 22:05:32]     "exeErrorCode": 0,
[2025-06-04 22:05:32]     "exeErrorDiag": "",
[2025-06-04 22:05:32]     "pilotErrorCode": 0,
[2025-06-04 22:05:32]     "pilotErrorDiag": "",
[2025-06-04 22:05:32]  *** Listing of results directory ***
[2025-06-04 22:05:32] total 385560
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:13 queuedata.json
[2025-06-04 22:05:32] -rwx------ 1 boinc boinc     37140 Jun  4 05:13 runpilot2-wrapper.sh
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc       100 Jun  4 20:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:05:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 20:41 run_atlas
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc       105 Jun  4 20:41 job.xml
[2025-06-04 22:05:32] -rw-r--r-- 2 boinc boinc 216410209 Jun  4 20:41 EVNT.45006593._002064.pool.root.1
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc      6679 Jun  4 20:41 init_data.xml
[2025-06-04 22:05:32] drwxrwx--x 2 boinc boinc      4096 Jun  4 20:41 shared
[2025-06-04 22:05:32] -rw-r--r-- 2 boinc boinc    508877 Jun  4 20:41 input.tar.gz
[2025-06-04 22:05:32] -rw-r--r-- 2 boinc boinc     15093 Jun  4 20:41 start_atlas.sh
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc         0 Jun  4 20:41 boinc_lockfile
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc      2525 Jun  4 20:41 pandaJob.out
[2025-06-04 22:05:32] -rw------- 1 boinc boinc    990984 Jun  4 20:41 agis_schedconf.cvmfs.json
[2025-06-04 22:05:32] -rw------- 1 boinc boinc   1598969 Jun  4 20:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:05:32] drwx------ 4 boinc boinc      4096 Jun  4 20:41 pilot3
[2025-06-04 22:05:32] -rw------- 1 boinc boinc 173090465 Jun  4 22:04 HITS.45006595._051529.pool.root.1
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc       530 Jun  4 22:04 boinc_task_state.xml
[2025-06-04 22:05:32] -rw------- 1 boinc boinc        95 Jun  4 22:04 pilot_heartbeat.json
[2025-06-04 22:05:32] -rw------- 1 boinc boinc      1017 Jun  4 22:04 memory_monitor_summary.json
[2025-06-04 22:05:32] -rw------- 1 boinc boinc    246677 Jun  4 22:05 log.45006595._051529.job.log.tgz.1
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc      8192 Jun  4 22:05 boinc_mmap_file
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc        27 Jun  4 22:05 wrapper_checkpoint.txt
[2025-06-04 22:05:32] -rw------- 1 boinc boinc      7652 Jun  4 22:05 heartbeat.json
[2025-06-04 22:05:32] -rw------- 1 boinc boinc      4552 Jun  4 22:05 pilotlog.txt
[2025-06-04 22:05:32] -rw------- 1 boinc boinc    487775 Jun  4 22:05 log.45006595._051529.job.log.1
[2025-06-04 22:05:32] -rw------- 1 boinc boinc       357 Jun  4 22:05 output.list
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc       620 Jun  4 22:05 runtime_log
[2025-06-04 22:05:32] -rw------- 1 boinc boinc    757760 Jun  4 22:05 result.tar.gz
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc      8733 Jun  4 22:05 runtime_log.err
[2025-06-04 22:05:32] -rw------- 1 boinc boinc       658 Jun  4 22:05 b4nLDmZktg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme2mKDmxCZR3n.diag
[2025-06-04 22:05:32] -rw-r--r-- 1 boinc boinc     22403 Jun  4 22:05 stderr.txt
[2025-06-04 22:05:32] HITS file was successfully produced:
[2025-06-04 22:05:32] -rw------- 1 boinc boinc 173090465 Jun  4 22:04 shared/HITS.pool.root.1
[2025-06-04 22:05:32]  *** Contents of shared directory: ***
[2025-06-04 22:05:32] total 381640
[2025-06-04 22:05:32] -rw-r--r-- 2 boinc boinc 216410209 Jun  4 20:41 ATLAS.root_0
[2025-06-04 22:05:32] -rw-r--r-- 2 boinc boinc    508877 Jun  4 20:41 input.tar.gz
[2025-06-04 22:05:32] -rw-r--r-- 2 boinc boinc     15093 Jun  4 20:41 start_atlas.sh
[2025-06-04 22:05:32] -rw------- 1 boinc boinc 173090465 Jun  4 22:04 HITS.pool.root.1
[2025-06-04 22:05:32] -rw------- 1 boinc boinc    757760 Jun  4 22:05 result.tar.gz
22:05:33 (1745577): run_atlas exited; CPU time 14251.682443
22:05:33 (1745577): called boinc_finish(0)

</stderr_txt>
]]>

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