Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:20:20 (4183185): wrapper (7.7.26015): starting
02:20:20 (4183185): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 02:20:20] Arguments: --nthreads 4
[2025-06-06 02:20:20] Threads: 4
[2025-06-06 02:20:20] Checking for CVMFS
[2025-06-06 02:20:20] No cvmfs_config command found, will try listing directly
[2025-06-06 02:20:20] CVMFS is ok
[2025-06-06 02:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 02:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 02:20:20] Further information can be found at the LHC@home message board.
[2025-06-06 02:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 02:20:20] Checking for apptainer binary...
[2025-06-06 02:20:20] which: no apptainer in ((null))
[2025-06-06 02:20:20] apptainer is not installed, using version from CVMFS
[2025-06-06 02:20:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 02:20:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-06 02:20:20] apptainer works
[2025-06-06 02:20:20] Set ATHENA_PROC_NUMBER=4
[2025-06-06 02:20:20] Set ATHENA_CORE_NUMBER=4
[2025-06-06 02:20:20] Starting ATLAS job with PandaID=6678072139
[2025-06-06 02:20:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:03:42]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:03:42] 2025-06-06 03:01:47,623 | INFO     | total number of processed events: 400 (read)
[2025-06-06 05:03:42] 2025-06-06 03:01:47,627 | INFO     | executing command: lscpu
[2025-06-06 05:03:42] 2025-06-06 03:01:47,684 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 05:03:42] 2025-06-06 03:01:50,311 | WARNING  | process 4193822 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 05:03:42] 2025-06-06 03:01:50,311 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6678072139/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:03:42] 2025-06-06 03:01:50,619 | INFO     | number of running child processes to parent process 4193822: 1
[2025-06-06 05:03:42] 2025-06-06 03:01:50,619 | INFO     | maximum number of monitored processes: 6
[2025-06-06 05:03:42] 2025-06-06 03:01:51,086 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 05:03:42] 2025-06-06 03:01:51,087 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6678072139/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:03:42] 2025-06-06 03:01:51,088 | INFO     | extracted standard info from prmon json
[2025-06-06 05:03:42] 2025-06-06 03:01:51,088 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:03:42] 2025-06-06 03:01:51,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:03:42] 2025-06-06 03:01:51,089 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:03:42] 2025-06-06 03:01:51,089 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:03:42] 2025-06-06 03:01:51,093 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:03:42] 2025-06-06 03:01:51,093 | INFO     | sum of square deviations: 1223016419.5
[2025-06-06 05:03:42] 2025-06-06 03:01:51,094 | INFO     | sum of deviations: -18766327340.500004
[2025-06-06 05:03:42] 2025-06-06 03:01:51,094 | INFO     | mean x: 1749174053.5
[2025-06-06 05:03:42] 2025-06-06 03:01:51,094 | INFO     | mean y: 2379809.6265822784
[2025-06-06 05:03:42] 2025-06-06 03:01:51,094 | INFO     | -- intersect: 26842226225.51541
[2025-06-06 05:03:42] 2025-06-06 03:01:51,094 | INFO     | intersect: 26842226225.51541
[2025-06-06 05:03:42] 2025-06-06 03:01:51,095 | INFO     | chi2: 1.8337763248896888
[2025-06-06 05:03:42] 2025-06-06 03:01:51,095 | INFO     | sum of square deviations: 1110539892.0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,096 | INFO     | sum of deviations: -17622246567.99999
[2025-06-06 05:03:42] 2025-06-06 03:01:51,096 | INFO     | mean x: 1749173901.0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,096 | INFO     | mean y: 2381361.522875817
[2025-06-06 05:03:42] 2025-06-06 03:01:51,096 | INFO     | -- intersect: 27758587145.558235
[2025-06-06 05:03:42] 2025-06-06 03:01:51,096 | INFO     | intersect: 27758587145.558235
[2025-06-06 05:03:42] 2025-06-06 03:01:51,096 | INFO     | chi2: 1.830926538986907
[2025-06-06 05:03:42] 2025-06-06 03:01:51,097 | INFO     | current chi2=1.830926538986907 (change=0.15540531656461823 %)
[2025-06-06 05:03:42] 2025-06-06 03:01:51,097 | INFO     | right removable region: 152
[2025-06-06 05:03:42] 2025-06-06 03:01:51,097 | INFO     | sum of square deviations: 1110539892.0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,098 | INFO     | sum of deviations: -43179931225.0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,098 | INFO     | mean x: 1749174206.0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,098 | INFO     | mean y: 2412465.777777778
[2025-06-06 05:03:42] 2025-06-06 03:01:51,098 | INFO     | -- intersect: 68013676590.29424
[2025-06-06 05:03:42] 2025-06-06 03:01:51,098 | INFO     | intersect: 68013676590.29424
[2025-06-06 05:03:42] 2025-06-06 03:01:51,098 | INFO     | chi2: 0.19731638899350998
[2025-06-06 05:03:42] 2025-06-06 03:01:51,098 | INFO     | current chi2=0.19731638899350998 (change=89.23988785789459 %)
[2025-06-06 05:03:42] 2025-06-06 03:01:51,099 | INFO     | sum of square deviations: 1005179777.0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,100 | INFO     | sum of deviations: -38684050421.00001
[2025-06-06 05:03:42] 2025-06-06 03:01:51,100 | INFO     | mean x: 1749174358.5
[2025-06-06 05:03:42] 2025-06-06 03:01:51,100 | INFO     | mean y: 2405926.756756757
[2025-06-06 05:03:42] 2025-06-06 03:01:51,100 | INFO     | -- intersect: 67318870729.98205
[2025-06-06 05:03:42] 2025-06-06 03:01:51,100 | INFO     | intersect: 67318870729.98205
[2025-06-06 05:03:42] 2025-06-06 03:01:51,100 | INFO     | chi2: 0.19414167692997783
[2025-06-06 05:03:42] 2025-06-06 03:01:51,100 | INFO     | current chi2=0.19414167692997783 (change=1.6089449435629843 %)
[2025-06-06 05:03:42] 2025-06-06 03:01:51,100 | INFO     | left removable region: 20
[2025-06-06 05:03:42] 2025-06-06 03:01:51,101 | INFO     | sum of square deviations: 713140813.0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,101 | INFO     | sum of deviations: -25782088559.5
[2025-06-06 05:03:42] 2025-06-06 03:01:51,101 | INFO     | mean x: 1749174480.5
[2025-06-06 05:03:42] 2025-06-06 03:01:51,101 | INFO     | mean y: 2389934.507575758
[2025-06-06 05:03:42] 2025-06-06 03:01:51,101 | INFO     | -- intersect: 63240071105.15235
[2025-06-06 05:03:42] 2025-06-06 03:01:51,102 | INFO     | intersect: 63240071105.15235
[2025-06-06 05:03:42] 2025-06-06 03:01:51,102 | INFO     | chi2: 0.16776807230365925
[2025-06-06 05:03:42] 2025-06-06 03:01:51,102 | INFO     | -- intersect: 63240071105.15235
[2025-06-06 05:03:42] 2025-06-06 03:01:51,102 | INFO     | current memory leak: -36.15 B/s (using 132 data points, chi2=0.17)
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | ..............................
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | . Timing measurements:
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | . get job = 0 s
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | . initial setup = 1 s
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | . payload setup = 8 s
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | . stage-in = 0 s
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | . payload execution = 9645 s
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | . stage-out = 0 s
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | . log creation = 0 s
[2025-06-06 05:03:42] 2025-06-06 03:01:51,103 | INFO     | ..............................
[2025-06-06 05:03:42] 2025-06-06 03:01:51,213 | INFO     | 
[2025-06-06 05:03:42] 2025-06-06 03:01:51,213 | INFO     | job summary report
[2025-06-06 05:03:42] 2025-06-06 03:01:51,213 | INFO     | --------------------------------------------------
[2025-06-06 05:03:42] 2025-06-06 03:01:51,213 | INFO     | PanDA job id: 6678072139
[2025-06-06 05:03:42] 2025-06-06 03:01:51,213 | INFO     | task id: 45006595
[2025-06-06 05:03:42] 2025-06-06 03:01:51,213 | INFO     | errors: (none)
[2025-06-06 05:03:42] 2025-06-06 03:01:51,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | pilot state: finished 
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | transexitcode: 0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | exeerrorcode: 0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | exeerrordiag: 
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | exitcode: 0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | exitmsg: OK
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | cpuconsumptiontime: 37078 s
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | nevents: 400
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | neventsw: 0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | pid: 4193822
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | pgrp: 4193822
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | corecount: 4
[2025-06-06 05:03:42] 2025-06-06 03:01:51,214 | INFO     | event service: False
[2025-06-06 05:03:42] 2025-06-06 03:01:51,215 | INFO     | sizes: {0: 2397182, 1: 2397381, 6: 2397587, 12: 2397615, 9658: 2425964, 9659: 2435111, 9664: 2435225}
[2025-06-06 05:03:42] 2025-06-06 03:01:51,215 | INFO     | --------------------------------------------------
[2025-06-06 05:03:42] 2025-06-06 03:01:51,215 | INFO     | 
[2025-06-06 05:03:42] 2025-06-06 03:01:51,215 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-06-06 05:03:42] 2025-06-06 03:01:51,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,235 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,235 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:03:42] 2025-06-06 03:01:51,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:03:42] 2025-06-06 03:01:51,237 | INFO     | job 6678072139 has completed (purged errors)
[2025-06-06 05:03:42] 2025-06-06 03:01:51,237 | INFO     | overall cleanup function is called
[2025-06-06 05:03:42] 2025-06-06 03:01:52,244 | INFO     | --- collectZombieJob: --- 10, [4193822]
[2025-06-06 05:03:42] 2025-06-06 03:01:52,244 | INFO     | zombie collector waiting for pid 4193822
[2025-06-06 05:03:42] 2025-06-06 03:01:52,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:03:42] 2025-06-06 03:01:52,244 | INFO     | collected zombie processes
[2025-06-06 05:03:42] 2025-06-06 03:01:52,245 | INFO     | will attempt to kill all subprocesses of pid=4193822
[2025-06-06 05:03:42] 2025-06-06 03:01:52,591 | INFO     | process IDs to be killed: [4193822] (in reverse order)
[2025-06-06 05:03:42] 2025-06-06 03:01:52,703 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:03:42] 2025-06-06 03:01:52,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:03:42] 2025-06-06 03:01:52,714 | INFO     | did not find any defunct processes belonging to 4193822
[2025-06-06 05:03:42] 2025-06-06 03:01:52,725 | INFO     | did not find any defunct processes belonging to 4193822
[2025-06-06 05:03:42] 2025-06-06 03:01:52,725 | INFO     | ready for new job
[2025-06-06 05:03:42] 2025-06-06 03:01:52,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:03:42] 2025-06-06 03:01:52,727 | INFO     | **************************************
[2025-06-06 05:03:42] 2025-06-06 03:01:52,727 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:03:42] 2025-06-06 03:01:52,727 | INFO     | **************************************
[2025-06-06 05:03:42] 2025-06-06 03:01:52,727 | INFO     | 
[2025-06-06 05:03:42] 2025-06-06 03:01:52,731 | INFO     | architecture information:
[2025-06-06 05:03:42] 2025-06-06 03:01:52,731 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:03:42] 2025-06-06 03:01:52,746 | INFO     | cat /etc/os-release:
[2025-06-06 05:03:42] NAME="CentOS Linux"
[2025-06-06 05:03:42] VERSION="7 (Core)"
[2025-06-06 05:03:42] ID="centos"
[2025-06-06 05:03:42] ID_LIKE="rhel fedora"
[2025-06-06 05:03:42] VERSION_ID="7"
[2025-06-06 05:03:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:03:42] ANSI_COLOR="0;31"
[2025-06-06 05:03:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:03:42] HOME_URL="https://www.centos.org/"
[2025-06-06 05:03:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:03:42] 
[2025-06-06 05:03:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:03:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:03:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:03:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:03:42] 
[2025-06-06 05:03:42] 2025-06-06 03:01:52,746 | INFO     | **************************************
[2025-06-06 05:03:42] 2025-06-06 03:01:53,249 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-06-06 05:03:42] 2025-06-06 03:01:53,267 | INFO     | sufficient remaining disk space (655232073728 B)
[2025-06-06 05:03:42] 2025-06-06 03:01:53,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:03:42] 2025-06-06 03:01:53,268 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:03:42] 2025-06-06 03:01:53,268 | INFO     | update_server=False
[2025-06-06 05:03:42] 2025-06-06 03:01:53,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:03:42] 2025-06-06 03:01:53,268 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 05:03:42] 2025-06-06 03:01:53,269 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:03:42] 2025-06-06 03:01:53,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:03:42] 2025-06-06 03:01:53,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:03:42] 2025-06-06 03:01:53,541 | INFO     | all payload control threads have been joined
[2025-06-06 05:03:42] 2025-06-06 03:01:53,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:03:42] 2025-06-06 03:01:54,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:03:42] 2025-06-06 03:01:54,127 | INFO     | aborting loop
[2025-06-06 05:03:42] 2025-06-06 03:01:54,142 | INFO     | all data control threads have been joined
[2025-06-06 05:03:42] 2025-06-06 03:01:54,146 | INFO     | all job control threads have been joined
[2025-06-06 05:03:42] 2025-06-06 03:01:54,269 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:54,281 | INFO     | [job] validate thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:54,546 | INFO     | [payload] control thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:54,652 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:54,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:54,743 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:55,131 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:55,147 | INFO     | [data] control thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:55,148 | INFO     | [job] control thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:55,162 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:55,276 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:55,344 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:55,659 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:55,860 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:01:56,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:03:42] 2025-06-06 03:01:56,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:03:42] 2025-06-06 03:01:57,223 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:02:00,635 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:03:42] 2025-06-06 03:02:01,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22401720166208)>', '<ExcThread(monitor, started 22401003808512)>']
[2025-06-06 05:03:42] 2025-06-06 03:02:02,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:03:42] 2025-06-06 03:02:02,303 | INFO     | [monitor] control thread has ended
[2025-06-06 05:03:42] 2025-06-06 03:02:06,754 | INFO     | all workflow threads have been joined
[2025-06-06 05:03:42] 2025-06-06 03:02:06,754 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:03:42] 2025-06-06 03:02:06,754 | INFO     | traces error code: 0
[2025-06-06 05:03:42] 2025-06-06 03:02:06,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:03:42] 2025-06-06 03:02:06,911 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:03:42] 2025-06-06 03:02:06,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:03:42] 2025-06-06 03:02:06,916 [wrapper] pilotpid: 4186845
[2025-06-06 05:03:42] 2025-06-06 03:02:06,918 [wrapper] Pilot exit status: 0
[2025-06-06 05:03:42] 2025-06-06 03:02:06,928 [wrapper] pandaids: 6678072139
[2025-06-06 05:03:42] 2025-06-06 03:02:06,994 [wrapper] cleanup supervisor_pilot  226569 4186846
[2025-06-06 05:03:42] 2025-06-06 03:02:06,997 [wrapper] Test setup, not cleaning
[2025-06-06 05:03:42] 2025-06-06 03:02:06,999 [wrapper] apfmon messages muted
[2025-06-06 05:03:42] 2025-06-06 03:02:07,002 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:03:42] 2025-06-06 03:02:07,004 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:03:42]  *** Error codes and diagnostics ***
[2025-06-06 05:03:42]     "exeErrorCode": 0,
[2025-06-06 05:03:42]     "exeErrorDiag": "",
[2025-06-06 05:03:42]     "pilotErrorCode": 0,
[2025-06-06 05:03:42]     "pilotErrorDiag": "",
[2025-06-06 05:03:42]  *** Listing of results directory ***
[2025-06-06 05:03:42] total 387436
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc      5111 Jun  3 22:53 queuedata.json
[2025-06-06 05:03:42] -rwx------ 1 boinc boinc     37140 Jun  3 22:55 runpilot2-wrapper.sh
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc       100 Jun  6 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:03:42] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 02:20 run_atlas
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc       105 Jun  6 02:20 job.xml
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc      6635 Jun  6 02:20 init_data.xml
[2025-06-06 05:03:42] -rw-r--r-- 2 boinc boinc 212874817 Jun  6 02:20 EVNT.45006593._001823.pool.root.1
[2025-06-06 05:03:42] -rw-r--r-- 2 boinc boinc     15093 Jun  6 02:20 start_atlas.sh
[2025-06-06 05:03:42] drwxrwx--x 2 boinc boinc      4096 Jun  6 02:20 shared
[2025-06-06 05:03:42] -rw-r--r-- 2 boinc boinc    508883 Jun  6 02:20 input.tar.gz
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc         0 Jun  6 02:20 boinc_lockfile
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc      2525 Jun  6 02:20 pandaJob.out
[2025-06-06 05:03:42] -rw------- 1 boinc boinc    987721 Jun  6 02:20 agis_schedconf.cvmfs.json
[2025-06-06 05:03:42] -rw------- 1 boinc boinc   1598969 Jun  6 02:20 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:03:42] drwx------ 4 boinc boinc      4096 Jun  6 02:20 pilot3
[2025-06-06 05:03:42] -rw------- 1 boinc boinc 177578067 Jun  6 05:01 HITS.45006595._045458.pool.root.1
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc       529 Jun  6 05:01 boinc_task_state.xml
[2025-06-06 05:03:42] -rw------- 1 boinc boinc        95 Jun  6 05:01 pilot_heartbeat.json
[2025-06-06 05:03:42] -rw------- 1 boinc boinc      1034 Jun  6 05:01 memory_monitor_summary.json
[2025-06-06 05:03:42] -rw------- 1 boinc boinc    303802 Jun  6 05:01 log.45006595._045458.job.log.tgz.1
[2025-06-06 05:03:42] -rw------- 1 boinc boinc      7727 Jun  6 05:01 heartbeat.json
[2025-06-06 05:03:42] -rw------- 1 boinc boinc      4486 Jun  6 05:02 pilotlog.txt
[2025-06-06 05:03:42] -rw------- 1 boinc boinc    914654 Jun  6 05:02 log.45006595._045458.job.log.1
[2025-06-06 05:03:42] -rw------- 1 boinc boinc       357 Jun  6 05:02 output.list
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:02 runtime_log
[2025-06-06 05:03:42] -rw------- 1 boinc boinc   1239040 Jun  6 05:02 result.tar.gz
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc      9025 Jun  6 05:02 runtime_log.err
[2025-06-06 05:03:42] -rw------- 1 boinc boinc       662 Jun  6 05:02 nkLKDmPqng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmK9lKDm3nGCmn.diag
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc        26 Jun  6 05:03 wrapper_checkpoint.txt
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:03 boinc_mmap_file
[2025-06-06 05:03:42] -rw-r--r-- 1 boinc boinc     20927 Jun  6 05:03 stderr.txt
[2025-06-06 05:03:42] HITS file was successfully produced:
[2025-06-06 05:03:42] -rw------- 1 boinc boinc 177578067 Jun  6 05:01 shared/HITS.pool.root.1
[2025-06-06 05:03:42]  *** Contents of shared directory: ***
[2025-06-06 05:03:42] total 383044
[2025-06-06 05:03:42] -rw-r--r-- 2 boinc boinc 212874817 Jun  6 02:20 ATLAS.root_0
[2025-06-06 05:03:42] -rw-r--r-- 2 boinc boinc     15093 Jun  6 02:20 start_atlas.sh
[2025-06-06 05:03:42] -rw-r--r-- 2 boinc boinc    508883 Jun  6 02:20 input.tar.gz
[2025-06-06 05:03:42] -rw------- 1 boinc boinc 177578067 Jun  6 05:01 HITS.pool.root.1
[2025-06-06 05:03:42] -rw------- 1 boinc boinc   1239040 Jun  6 05:02 result.tar.gz
05:03:44 (4183185): run_atlas exited; CPU time 37435.441063
05:03:44 (4183185): called boinc_finish(0)

</stderr_txt>
]]>

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