Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:42:38 (652449): wrapper (7.7.26015): starting
18:42:38 (652449): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 18:42:38] Arguments: --nthreads 2
[2025-06-04 18:42:38] Threads: 2
[2025-06-04 18:42:38] Checking for CVMFS
[2025-06-04 18:42:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:42:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:42:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:42:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:42:38] 2.9.2.0 9469 2696 62232 146788 3 56 32699798 36864000 0 130560 0 1739136 99.990 677665 54230 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 18:42:38] CVMFS is ok
[2025-06-04 18:42:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:42:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:42:38] Further information can be found at the LHC@home message board.
[2025-06-04 18:42:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:42:38] Checking for apptainer binary...
[2025-06-04 18:42:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:42:38] Running /usr/bin/apptainer --version
[2025-06-04 18:42:38] apptainer version 1.3.6-6.1
[2025-06-04 18:42:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:42:38] atlasA219
[2025-06-04 18:42:38] apptainer works
[2025-06-04 18:42:38] Set ATHENA_PROC_NUMBER=2
[2025-06-04 18:42:38] Set ATHENA_CORE_NUMBER=2
[2025-06-04 18:42:38] Starting ATLAS job with PandaID=6667667667
[2025-06-04 18:42:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:17:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:17:01] 2025-06-04 19:16:35,557 | INFO     | monitor loop #708: job 0:6667667667 is in state 'finished'
[2025-06-04 21:17:01] 2025-06-04 19:16:35,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:17:01] 2025-06-04 19:16:38,062 | INFO     | monitor loop #709: job 0:6667667667 is in state 'finished'
[2025-06-04 21:17:01] 2025-06-04 19:16:38,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:17:01] 2025-06-04 19:16:40,569 | INFO     | monitor loop #710: job 0:6667667667 is in state 'finished'
[2025-06-04 21:17:01] 2025-06-04 19:16:40,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:17:01] 2025-06-04 19:16:41,426 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 21:17:01] 2025-06-04 19:16:41,426 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6667667667/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:17:01] 2025-06-04 19:16:41,426 | INFO     | extracted standard info from prmon json
[2025-06-04 21:17:01] 2025-06-04 19:16:41,426 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:17:01] 2025-06-04 19:16:41,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:17:01] 2025-06-04 19:16:41,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:17:01] 2025-06-04 19:16:41,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:17:01] 2025-06-04 19:16:41,427 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:17:01] 2025-06-04 19:16:41,427 | INFO     | sum of square deviations: 1067554900.0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | sum of deviations: -9013121551.000002
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | mean x: 1749059978.0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | mean y: 2326138.1258278145
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | -- intersect: 14769238998.25451
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | intersect: 14769238998.25451
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | chi2: 1.5863230106257045
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | sum of square deviations: 964976232.5
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | sum of deviations: -8645150183.500002
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | mean x: 1749059825.5
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | mean y: 2326678.51369863
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | -- intersect: 15672023363.373558
[2025-06-04 21:17:01] 2025-06-04 19:16:41,428 | INFO     | intersect: 15672023363.373558
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | chi2: 1.5837288868896815
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | current chi2=1.5837288868896815 (change=0.16353061253267392 %)
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | right removable region: 145
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | sum of square deviations: 964976232.5
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | sum of deviations: -26251068363.000004
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | mean x: 1749060130.5
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | mean y: 2351192.684931507
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | -- intersect: 47583520044.68897
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | intersect: 47583520044.68897
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | chi2: 0.15980937377100385
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | current chi2=0.15980937377100385 (change=89.92579867400593 %)
[2025-06-04 21:17:01] 2025-06-04 19:16:41,429 | INFO     | sum of square deviations: 869188390.0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | sum of deviations: -19117858415.0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | mean x: 1749060283.0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | mean y: 2339826.744680851
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | -- intersect: 38473041039.96939
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | intersect: 38473041039.96939
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | chi2: 0.1205979769800518
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | current chi2=0.1205979769800518 (change=24.53635595064615 %)
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | left removable region: 20
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | sum of square deviations: 605592750.0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | sum of deviations: -8986078238.0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | mean x: 1749060405.0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | mean y: 2322976.128
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | -- intersect: 25955727541.02407
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | intersect: 25955727541.02407
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | chi2: 0.06692910524157754
[2025-06-04 21:17:01] 2025-06-04 19:16:41,430 | INFO     | -- intersect: 25955727541.02407
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | current memory leak: -14.84 B/s (using 125 data points, chi2=0.07)
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | ..............................
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | . Timing measurements:
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | . get job = 0 s
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | . initial setup = 1 s
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | . payload setup = 9 s
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | . stage-in = 0 s
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | . payload execution = 9185 s
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | . stage-out = 0 s
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | . log creation = 0 s
[2025-06-04 21:17:01] 2025-06-04 19:16:41,431 | INFO     | ..............................
[2025-06-04 21:17:01] 2025-06-04 19:16:41,751 | INFO     | 
[2025-06-04 21:17:01] 2025-06-04 19:16:41,752 | INFO     | job summary report
[2025-06-04 21:17:01] 2025-06-04 19:16:41,752 | INFO     | --------------------------------------------------
[2025-06-04 21:17:01] 2025-06-04 19:16:41,752 | INFO     | PanDA job id: 6667667667
[2025-06-04 21:17:01] 2025-06-04 19:16:41,752 | INFO     | task id: 44871837
[2025-06-04 21:17:01] 2025-06-04 19:16:41,752 | INFO     | errors: (none)
[2025-06-04 21:17:01] 2025-06-04 19:16:41,753 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:17:01] 2025-06-04 19:16:41,753 | INFO     | pilot state: finished 
[2025-06-04 21:17:01] 2025-06-04 19:16:41,753 | INFO     | transexitcode: 0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,753 | INFO     | exeerrorcode: 0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,753 | INFO     | exeerrordiag: 
[2025-06-04 21:17:01] 2025-06-04 19:16:41,753 | INFO     | exitcode: 0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,753 | INFO     | exitmsg: OK
[2025-06-04 21:17:01] 2025-06-04 19:16:41,754 | INFO     | cpuconsumptiontime: 18011 s
[2025-06-04 21:17:01] 2025-06-04 19:16:41,754 | INFO     | nevents: 400
[2025-06-04 21:17:01] 2025-06-04 19:16:41,754 | INFO     | neventsw: 0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,754 | INFO     | pid: 662532
[2025-06-04 21:17:01] 2025-06-04 19:16:41,754 | INFO     | pgrp: 662532
[2025-06-04 21:17:01] 2025-06-04 19:16:41,754 | INFO     | corecount: 2
[2025-06-04 21:17:01] 2025-06-04 19:16:41,754 | INFO     | event service: False
[2025-06-04 21:17:01] 2025-06-04 19:16:41,754 | INFO     | sizes: {0: 2397394, 7: 2397600, 11: 2397628, 9198: 2434834, 9201: 2434834, 9211: 2435032}
[2025-06-04 21:17:01] 2025-06-04 19:16:41,755 | INFO     | --------------------------------------------------
[2025-06-04 21:17:01] 2025-06-04 19:16:41,755 | INFO     | 
[2025-06-04 21:17:01] 2025-06-04 19:16:41,755 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,767 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:17:01] 2025-06-04 19:16:41,768 | INFO     | job 6667667667 has completed (purged errors)
[2025-06-04 21:17:01] 2025-06-04 19:16:41,768 | INFO     | overall cleanup function is called
[2025-06-04 21:17:01] 2025-06-04 19:16:42,774 | INFO     | --- collectZombieJob: --- 10, [662532]
[2025-06-04 21:17:01] 2025-06-04 19:16:42,774 | INFO     | zombie collector waiting for pid 662532
[2025-06-04 21:17:01] 2025-06-04 19:16:42,774 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:17:01] 2025-06-04 19:16:42,775 | INFO     | collected zombie processes
[2025-06-04 21:17:01] 2025-06-04 19:16:42,775 | INFO     | will attempt to kill all subprocesses of pid=662532
[2025-06-04 21:17:01] 2025-06-04 19:16:42,807 | INFO     | process IDs to be killed: [662532] (in reverse order)
[2025-06-04 21:17:01] 2025-06-04 19:16:42,828 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:17:01] 2025-06-04 19:16:42,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:17:01] 2025-06-04 19:16:42,829 | INFO     | did not find any defunct processes belonging to 662532
[2025-06-04 21:17:01] 2025-06-04 19:16:42,829 | INFO     | did not find any defunct processes belonging to 662532
[2025-06-04 21:17:01] 2025-06-04 19:16:42,830 | INFO     | ready for new job
[2025-06-04 21:17:01] 2025-06-04 19:16:42,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:17:01] 2025-06-04 19:16:42,830 | INFO     | **************************************
[2025-06-04 21:17:01] 2025-06-04 19:16:42,830 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:17:01] 2025-06-04 19:16:42,830 | INFO     | **************************************
[2025-06-04 21:17:01] 2025-06-04 19:16:42,830 | INFO     | 
[2025-06-04 21:17:01] 2025-06-04 19:16:42,830 | INFO     | architecture information:
[2025-06-04 21:17:01] 2025-06-04 19:16:42,830 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:17:01] 2025-06-04 19:16:42,839 | INFO     | cat /etc/os-release:
[2025-06-04 21:17:01] NAME="CentOS Linux"
[2025-06-04 21:17:01] VERSION="7 (Core)"
[2025-06-04 21:17:01] ID="centos"
[2025-06-04 21:17:01] ID_LIKE="rhel fedora"
[2025-06-04 21:17:01] VERSION_ID="7"
[2025-06-04 21:17:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:17:01] ANSI_COLOR="0;31"
[2025-06-04 21:17:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:17:01] HOME_URL="https://www.centos.org/"
[2025-06-04 21:17:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:17:01] 
[2025-06-04 21:17:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:17:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:17:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:17:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:17:01] 
[2025-06-04 21:17:01] 2025-06-04 19:16:42,839 | INFO     | **************************************
[2025-06-04 21:17:01] 2025-06-04 19:16:43,342 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 21:17:01] 2025-06-04 19:16:43,356 | INFO     | sufficient remaining disk space (173253066752 B)
[2025-06-04 21:17:01] 2025-06-04 19:16:43,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:17:01] 2025-06-04 19:16:43,357 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:17:01] 2025-06-04 19:16:43,357 | INFO     | update_server=False
[2025-06-04 21:17:01] 2025-06-04 19:16:43,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:17:01] 2025-06-04 19:16:43,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:17:01] 2025-06-04 19:16:43,357 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:17:01] 2025-06-04 19:16:43,357 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:17:01] 2025-06-04 19:16:43,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:17:01] 2025-06-04 19:16:43,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:17:01] 2025-06-04 19:16:43,533 | INFO     | all payload control threads have been joined
[2025-06-04 21:17:01] 2025-06-04 19:16:43,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:17:01] 2025-06-04 19:16:44,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:17:01] 2025-06-04 19:16:44,078 | INFO     | aborting loop
[2025-06-04 21:17:01] 2025-06-04 19:16:44,360 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:44,362 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:44,376 | INFO     | all job control threads have been joined
[2025-06-04 21:17:01] 2025-06-04 19:16:44,380 | INFO     | all data control threads have been joined
[2025-06-04 21:17:01] 2025-06-04 19:16:44,482 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:44,539 | INFO     | [payload] control thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:44,561 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:44,591 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:44,964 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:45,084 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:45,208 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:45,382 | INFO     | [job] control thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:45,385 | INFO     | [data] control thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:45,399 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:45,766 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:45,812 | INFO     | [job] validate thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:46,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:17:01] 2025-06-04 19:16:50,200 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:53,777 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:17:01] 2025-06-04 19:16:54,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:17:01] 2025-06-04 19:16:56,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640187324224)>', '<ExcThread(monitor, started 140639526164224)>']
[2025-06-04 21:17:01] 2025-06-04 19:16:56,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:17:01] 2025-06-04 19:16:56,424 | INFO     | [monitor] control thread has ended
[2025-06-04 21:17:01] 2025-06-04 19:17:01,320 | INFO     | all workflow threads have been joined
[2025-06-04 21:17:01] 2025-06-04 19:17:01,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:17:01] 2025-06-04 19:17:01,321 | INFO     | traces error code: 0
[2025-06-04 21:17:01] 2025-06-04 19:17:01,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:17:01] 2025-06-04 19:17:01,364 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:17:01] 2025-06-04 19:17:01,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:17:01] 2025-06-04 19:17:01,370 [wrapper] pilotpid: 656067
[2025-06-04 21:17:01] 2025-06-04 19:17:01,372 [wrapper] Pilot exit status: 0
[2025-06-04 21:17:01] 2025-06-04 19:17:01,379 [wrapper] pandaids: 6667667667
[2025-06-04 21:17:01] 2025-06-04 19:17:01,392 [wrapper] cleanup supervisor_pilot  679288 656068
[2025-06-04 21:17:01] 2025-06-04 19:17:01,394 [wrapper] Test setup, not cleaning
[2025-06-04 21:17:01] 2025-06-04 19:17:01,397 [wrapper] apfmon messages muted
[2025-06-04 21:17:01] 2025-06-04 19:17:01,399 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:17:01] 2025-06-04 19:17:01,401 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:17:01]  *** Error codes and diagnostics ***
[2025-06-04 21:17:01]     "exeErrorCode": 0,
[2025-06-04 21:17:01]     "exeErrorDiag": "",
[2025-06-04 21:17:01]     "pilotErrorCode": 0,
[2025-06-04 21:17:01]     "pilotErrorDiag": "",
[2025-06-04 21:17:01]  *** Listing of results directory ***
[2025-06-04 21:17:01] total 412208
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc    495897 May 28 00:42 pilot3.tar.gz
[2025-06-04 21:17:01] -rwx------ 1 boinc boinc     37140 May 28 00:50 runpilot2-wrapper.sh
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc      5111 May 28 00:50 queuedata.json
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc       100 Jun  4 18:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:17:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 18:42 run_atlas
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc       105 Jun  4 18:42 job.xml
[2025-06-04 21:17:01] -rw-r--r-- 2 boinc boinc 223697488 Jun  4 18:42 EVNT.44871834._002924.pool.root.1
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc      6691 Jun  4 18:42 init_data.xml
[2025-06-04 21:17:01] drwxrwx--x 2 boinc boinc      4096 Jun  4 18:42 shared
[2025-06-04 21:17:01] -rw-r--r-- 2 boinc boinc    508871 Jun  4 18:42 input.tar.gz
[2025-06-04 21:17:01] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:42 start_atlas.sh
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc         0 Jun  4 18:42 boinc_lockfile
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc      2558 Jun  4 18:42 pandaJob.out
[2025-06-04 21:17:01] -rw------- 1 boinc boinc    990984 Jun  4 18:42 agis_schedconf.cvmfs.json
[2025-06-04 21:17:01] -rw------- 1 boinc boinc   1598969 Jun  4 18:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:17:01] drwx------ 4 boinc boinc      4096 Jun  4 18:42 pilot3
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc       530 Jun  4 21:16 boinc_task_state.xml
[2025-06-04 21:17:01] -rw------- 1 boinc boinc 192338247 Jun  4 21:16 HITS.44871837._074579.pool.root.1
[2025-06-04 21:17:01] -rw------- 1 boinc boinc      1012 Jun  4 21:16 memory_monitor_summary.json
[2025-06-04 21:17:01] -rw------- 1 boinc boinc    254206 Jun  4 21:16 log.44871837._074579.job.log.tgz.1
[2025-06-04 21:17:01] -rw------- 1 boinc boinc        95 Jun  4 21:16 pilot_heartbeat.json
[2025-06-04 21:17:01] -rw------- 1 boinc boinc      7657 Jun  4 21:16 heartbeat.json
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc      8192 Jun  4 21:16 boinc_mmap_file
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc        27 Jun  4 21:16 wrapper_checkpoint.txt
[2025-06-04 21:17:01] -rw------- 1 boinc boinc      4552 Jun  4 21:17 pilotlog.txt
[2025-06-04 21:17:01] -rw------- 1 boinc boinc    859797 Jun  4 21:17 log.44871837._074579.job.log.1
[2025-06-04 21:17:01] -rw------- 1 boinc boinc       357 Jun  4 21:17 output.list
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc       620 Jun  4 21:17 runtime_log
[2025-06-04 21:17:01] -rw------- 1 boinc boinc   1136640 Jun  4 21:17 result.tar.gz
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc      8748 Jun  4 21:17 runtime_log.err
[2025-06-04 21:17:01] -rw------- 1 boinc boinc       662 Jun  4 21:17 7vUKDmXJIe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQXSKDmMkKPhn.diag
[2025-06-04 21:17:01] -rw-r--r-- 1 boinc boinc     21011 Jun  4 21:17 stderr.txt
[2025-06-04 21:17:01] HITS file was successfully produced:
[2025-06-04 21:17:01] -rw------- 1 boinc boinc 192338247 Jun  4 21:16 shared/HITS.pool.root.1
[2025-06-04 21:17:01]  *** Contents of shared directory: ***
[2025-06-04 21:17:01] total 407920
[2025-06-04 21:17:01] -rw-r--r-- 2 boinc boinc 223697488 Jun  4 18:42 ATLAS.root_0
[2025-06-04 21:17:01] -rw-r--r-- 2 boinc boinc    508871 Jun  4 18:42 input.tar.gz
[2025-06-04 21:17:01] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:42 start_atlas.sh
[2025-06-04 21:17:01] -rw------- 1 boinc boinc 192338247 Jun  4 21:16 HITS.pool.root.1
[2025-06-04 21:17:01] -rw------- 1 boinc boinc   1136640 Jun  4 21:17 result.tar.gz
21:17:03 (652449): run_atlas exited; CPU time 18047.388543
21:17:03 (652449): called boinc_finish(0)

</stderr_txt>
]]>

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