Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:21:25 (18953): wrapper (7.7.26015): starting
04:21:25 (18953): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:21:25] Arguments: --nthreads 8
[2025-06-04 04:21:25] Threads: 8
[2025-06-04 04:21:25] Checking for CVMFS
[2025-06-04 04:21:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:21:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:21:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:21:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:21:27] 2.11.2.0 5091 18367 340364 146773 1 187 16271680 18432000 12553 130560 0 65790686 99.609 50984157 26915 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 04:21:27] CVMFS is ok
[2025-06-04 04:21:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:21:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:21:27] Further information can be found at the LHC@home message board.
[2025-06-04 04:21:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:21:27] Checking for apptainer binary...
[2025-06-04 04:21:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:21:27] Running /usr/bin/apptainer --version
[2025-06-04 04:21:27] apptainer version 1.3.2-1.el7
[2025-06-04 04:21:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:21:36] c-210-41.aglt2.org
[2025-06-04 04:21:36] apptainer works
[2025-06-04 04:21:36] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:21:36] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:21:37] Starting ATLAS job with PandaID=6678286038
[2025-06-04 04:21:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:15:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:15:18] 2025-06-04 10:14:55,112 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286038/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:15:18] 2025-06-04 10:14:55,113 | INFO     | extracted standard info from prmon json
[2025-06-04 06:15:18] 2025-06-04 10:14:55,113 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:15:18] 2025-06-04 10:14:55,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:15:18] 2025-06-04 10:14:55,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:15:18] 2025-06-04 10:14:55,114 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:15:18] 2025-06-04 10:14:55,119 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:15:18] 2025-06-04 10:14:55,119 | INFO     | sum of square deviations: 358929369.9619045
[2025-06-04 06:15:18] 2025-06-04 10:14:55,119 | INFO     | sum of deviations: 32080721383.676205
[2025-06-04 06:15:18] 2025-06-04 10:14:55,120 | INFO     | mean x: 1749028849.0190477
[2025-06-04 06:15:18] 2025-06-04 10:14:55,120 | INFO     | mean y: 2353857.161904762
[2025-06-04 06:15:18] 2025-06-04 10:14:55,120 | INFO     | -- intersect: -156323965171.4182
[2025-06-04 06:15:18] 2025-06-04 10:14:55,120 | INFO     | intersect: -156323965171.4182
[2025-06-04 06:15:18] 2025-06-04 10:14:55,120 | INFO     | chi2: 6.2792361547642495
[2025-06-04 06:15:18] 2025-06-04 10:14:55,120 | INFO     | sum of square deviations: 310054644.9600007
[2025-06-04 06:15:18] 2025-06-04 10:14:55,121 | INFO     | sum of deviations: 37434359564.72002
[2025-06-04 06:15:18] 2025-06-04 10:14:55,121 | INFO     | mean x: 1749028696.52
[2025-06-04 06:15:18] 2025-06-04 10:14:55,121 | INFO     | mean y: 2369706.64
[2025-06-04 06:15:18] 2025-06-04 10:14:55,121 | INFO     | -- intersect: -211166113587.61877
[2025-06-04 06:15:18] 2025-06-04 10:14:55,121 | INFO     | intersect: -211166113587.61877
[2025-06-04 06:15:18] 2025-06-04 10:14:55,121 | INFO     | chi2: 5.550563421199296
[2025-06-04 06:15:18] 2025-06-04 10:14:55,121 | INFO     | current chi2=5.550563421199296 (change=11.604480475098661 %)
[2025-06-04 06:15:18] 2025-06-04 10:14:55,121 | INFO     | right removable region: 99
[2025-06-04 06:15:18] 2025-06-04 10:14:55,126 | INFO     | sum of square deviations: 310053424.9600007
[2025-06-04 06:15:18] 2025-06-04 10:14:55,126 | INFO     | sum of deviations: -2393450953.92
[2025-06-04 06:15:18] 2025-06-04 10:14:55,126 | INFO     | mean x: 1749029001.52
[2025-06-04 06:15:18] 2025-06-04 10:14:55,126 | INFO     | mean y: 2461253.46
[2025-06-04 06:15:18] 2025-06-04 10:14:55,126 | INFO     | -- intersect: 13504054189.135015
[2025-06-04 06:15:18] 2025-06-04 10:14:55,127 | INFO     | intersect: 13504054189.135015
[2025-06-04 06:15:18] 2025-06-04 10:14:55,127 | INFO     | chi2: 1.4068600784164018
[2025-06-04 06:15:18] 2025-06-04 10:14:55,127 | INFO     | current chi2=1.4068600784164018 (change=77.595044305684 %)
[2025-06-04 06:15:18] 2025-06-04 10:14:55,127 | INFO     | sum of square deviations: 265828729.9578947
[2025-06-04 06:15:18] 2025-06-04 10:14:55,127 | INFO     | sum of deviations: -11584201728.221054
[2025-06-04 06:15:18] 2025-06-04 10:14:55,128 | INFO     | mean x: 1749029154.0210526
[2025-06-04 06:15:18] 2025-06-04 10:14:55,128 | INFO     | mean y: 2492347.610526316
[2025-06-04 06:15:18] 2025-06-04 10:14:55,128 | INFO     | -- intersect: 76221140918.54901
[2025-06-04 06:15:18] 2025-06-04 10:14:55,128 | INFO     | intersect: 76221140918.54901
[2025-06-04 06:15:18] 2025-06-04 10:14:55,128 | INFO     | chi2: 0.8963046925721988
[2025-06-04 06:15:18] 2025-06-04 10:14:55,128 | INFO     | current chi2=0.8963046925721988 (change=36.29041677114738 %)
[2025-06-04 06:15:18] 2025-06-04 10:14:55,128 | INFO     | sum of square deviations: 226022722.45555517
[2025-06-04 06:15:18] 2025-06-04 10:14:55,129 | INFO     | sum of deviations: -11648203479.133335
[2025-06-04 06:15:18] 2025-06-04 10:14:55,129 | INFO     | mean x: 1749029306.5222223
[2025-06-04 06:15:18] 2025-06-04 10:14:55,129 | INFO     | mean y: 2492440.066666667
[2025-06-04 06:15:18] 2025-06-04 10:14:55,129 | INFO     | -- intersect: 90139665517.18703
[2025-06-04 06:15:18] 2025-06-04 10:14:55,129 | INFO     | intersect: 90139665517.18703
[2025-06-04 06:15:18] 2025-06-04 10:14:55,129 | INFO     | chi2: 0.8823153776418098
[2025-06-04 06:15:18] 2025-06-04 10:14:55,129 | INFO     | current chi2=0.8823153776418098 (change=1.5607767142491176 %)
[2025-06-04 06:15:18] 2025-06-04 10:14:55,129 | INFO     | left removable region: 30
[2025-06-04 06:15:18] 2025-06-04 10:14:55,129 | INFO     | sum of square deviations: 101842551.94202887
[2025-06-04 06:15:18] 2025-06-04 10:14:55,134 | INFO     | sum of deviations: -1987343113.5072472
[2025-06-04 06:15:18] 2025-06-04 10:14:55,134 | INFO     | mean x: 1749029581.0289855
[2025-06-04 06:15:18] 2025-06-04 10:14:55,134 | INFO     | mean y: 2502166.7536231885
[2025-06-04 06:15:18] 2025-06-04 10:14:55,134 | INFO     | -- intersect: 34132851680.746513
[2025-06-04 06:15:18] 2025-06-04 10:14:55,134 | INFO     | intersect: 34132851680.746513
[2025-06-04 06:15:18] 2025-06-04 10:14:55,134 | INFO     | chi2: 0.008866294797424732
[2025-06-04 06:15:18] 2025-06-04 10:14:55,134 | INFO     | -- intersect: 34132851680.746513
[2025-06-04 06:15:18] 2025-06-04 10:14:55,134 | INFO     | current memory leak: -19.51 B/s (using 69 data points, chi2=0.01)
[2025-06-04 06:15:18] 2025-06-04 10:14:55,135 | INFO     | ..............................
[2025-06-04 06:15:18] 2025-06-04 10:14:55,135 | INFO     | . Timing measurements:
[2025-06-04 06:15:18] 2025-06-04 10:14:55,135 | INFO     | . get job = 0 s
[2025-06-04 06:15:18] 2025-06-04 10:14:55,135 | INFO     | . initial setup = 3 s
[2025-06-04 06:15:18] 2025-06-04 10:14:55,135 | INFO     | . payload setup = 101 s
[2025-06-04 06:15:18] 2025-06-04 10:14:55,135 | INFO     | . stage-in = 0 s
[2025-06-04 06:15:18] 2025-06-04 10:14:55,135 | INFO     | . payload execution = 6434 s
[2025-06-04 06:15:18] 2025-06-04 10:14:55,135 | INFO     | . stage-out = 1 s
[2025-06-04 06:15:18] 2025-06-04 10:14:55,136 | INFO     | . log creation = 0 s
[2025-06-04 06:15:18] 2025-06-04 10:14:55,136 | INFO     | ..............................
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | 
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | job summary report
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | --------------------------------------------------
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | PanDA job id: 6678286038
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | task id: 45006595
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | errors: (none)
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | pilot state: finished 
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | transexitcode: 0
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | exeerrorcode: 0
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | exeerrordiag: 
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | exitcode: 0
[2025-06-04 06:15:18] 2025-06-04 10:14:55,712 | INFO     | exitmsg: OK
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | cpuconsumptiontime: 29459 s
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | nevents: 400
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | neventsw: 0
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | pid: 30765
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | pgrp: 30765
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | corecount: 8
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | event service: False
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | sizes: {0: 2405182, 1: 2405182, 11: 2405210, 22: 2405238, 33: 2405266, 43: 2405322, 50: 2405684, 54: 2405712, 6539: 2432615, 6542: 2441556, 6545: 2441612, 6594: 24
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | --------------------------------------------------
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | 
[2025-06-04 06:15:18] 2025-06-04 10:14:55,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 06:15:18] 2025-06-04 10:14:55,954 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,954 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,954 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,954 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:15:18] 2025-06-04 10:14:55,956 | INFO     | job 6678286038 has completed (purged errors)
[2025-06-04 06:15:18] 2025-06-04 10:14:55,956 | INFO     | overall cleanup function is called
[2025-06-04 06:15:18] 2025-06-04 10:14:56,964 | INFO     | --- collectZombieJob: --- 10, [30765]
[2025-06-04 06:15:18] 2025-06-04 10:14:56,964 | INFO     | zombie collector waiting for pid 30765
[2025-06-04 06:15:18] 2025-06-04 10:14:56,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:15:18] 2025-06-04 10:14:56,964 | INFO     | collected zombie processes
[2025-06-04 06:15:18] 2025-06-04 10:14:56,964 | INFO     | will attempt to kill all subprocesses of pid=30765
[2025-06-04 06:15:18] 2025-06-04 10:14:57,551 | INFO     | process IDs to be killed: [30765] (in reverse order)
[2025-06-04 06:15:18] 2025-06-04 10:14:58,258 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:15:18] 2025-06-04 10:14:58,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:15:18] 2025-06-04 10:14:58,269 | INFO     | did not find any defunct processes belonging to 30765
[2025-06-04 06:15:18] 2025-06-04 10:14:58,278 | INFO     | did not find any defunct processes belonging to 30765
[2025-06-04 06:15:18] 2025-06-04 10:14:58,278 | INFO     | ready for new job
[2025-06-04 06:15:18] 2025-06-04 10:14:58,278 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:15:18] 2025-06-04 10:14:58,283 | INFO     | **************************************
[2025-06-04 06:15:18] 2025-06-04 10:14:58,283 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:15:18] 2025-06-04 10:14:58,284 | INFO     | **************************************
[2025-06-04 06:15:18] 2025-06-04 10:14:58,284 | INFO     | 
[2025-06-04 06:15:18] 2025-06-04 10:14:58,286 | INFO     | architecture information:
[2025-06-04 06:15:18] 2025-06-04 10:14:58,299 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:15:18] 2025-06-04 10:14:58,419 | INFO     | cat /etc/os-release:
[2025-06-04 06:15:18] NAME="CentOS Linux"
[2025-06-04 06:15:18] VERSION="7 (Core)"
[2025-06-04 06:15:18] ID="centos"
[2025-06-04 06:15:18] ID_LIKE="rhel fedora"
[2025-06-04 06:15:18] VERSION_ID="7"
[2025-06-04 06:15:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:15:18] ANSI_COLOR="0;31"
[2025-06-04 06:15:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:15:18] HOME_URL="https://www.centos.org/"
[2025-06-04 06:15:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:15:18] 
[2025-06-04 06:15:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:15:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:15:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:15:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:15:18] 
[2025-06-04 06:15:18] 2025-06-04 10:14:58,419 | INFO     | **************************************
[2025-06-04 06:15:18] 2025-06-04 10:14:58,923 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 06:15:18] 2025-06-04 10:14:59,059 | INFO     | sufficient remaining disk space (74759274496 B)
[2025-06-04 06:15:18] 2025-06-04 10:14:59,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:15:18] 2025-06-04 10:14:59,060 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:15:18] 2025-06-04 10:14:59,060 | INFO     | update_server=False
[2025-06-04 06:15:18] 2025-06-04 10:14:59,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:15:18] 2025-06-04 10:14:59,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:15:18] 2025-06-04 10:14:59,060 | INFO     | aborting loop
[2025-06-04 06:15:18] 2025-06-04 10:14:59,101 | INFO     | all payload control threads have been joined
[2025-06-04 06:15:18] 2025-06-04 10:14:59,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:15:18] 2025-06-04 10:14:59,608 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:15:18] 2025-06-04 10:14:59,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:15:18] 2025-06-04 10:14:59,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:15:18] 2025-06-04 10:14:59,744 | INFO     | all job control threads have been joined
[2025-06-04 06:15:18] 2025-06-04 10:15:00,066 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:00,066 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:00,107 | INFO     | [payload] control thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:00,150 | INFO     | all data control threads have been joined
[2025-06-04 06:15:18] 2025-06-04 10:15:00,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:15:18] 2025-06-04 10:15:00,573 | INFO     | [job] validate thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:00,617 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:00,750 | INFO     | [job] control thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:00,872 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:01,070 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:01,079 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:01,200 | INFO     | [data] control thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:01,226 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:01,252 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:01,281 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:01,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:15:18] 2025-06-04 10:15:01,539 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:05,384 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:09,904 | INFO     | job.realtimelogging is not enabled
[2025-06-04 06:15:18] 2025-06-04 10:15:10,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:15:18] 2025-06-04 10:15:11,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140061867976512)>', '<ExcThread(monitor, started 140061257475840)>']
[2025-06-04 06:15:18] 2025-06-04 10:15:11,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:15:18] 2025-06-04 10:15:11,681 | INFO     | [monitor] control thread has ended
[2025-06-04 06:15:18] 2025-06-04 10:15:16,092 | INFO     | all workflow threads have been joined
[2025-06-04 06:15:18] 2025-06-04 10:15:16,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:15:18] 2025-06-04 10:15:16,092 | INFO     | traces error code: 0
[2025-06-04 06:15:18] 2025-06-04 10:15:16,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:15:18] 2025-06-04 10:15:16,413 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:15:18] 2025-06-04 10:15:16,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:15:18] 2025-06-04 10:15:16,489 [wrapper] pilotpid: 23310
[2025-06-04 06:15:18] 2025-06-04 10:15:16,526 [wrapper] Pilot exit status: 0
[2025-06-04 06:15:18] 2025-06-04 10:15:16,720 [wrapper] pandaids: 6678286038
[2025-06-04 06:15:18] 2025-06-04 10:15:16,860 [wrapper] cleanup supervisor_pilot 22526 23311
[2025-06-04 06:15:18] 2025-06-04 10:15:16,904 [wrapper] Test setup, not cleaning
[2025-06-04 06:15:18] 2025-06-04 10:15:16,939 [wrapper] apfmon messages muted
[2025-06-04 06:15:18] 2025-06-04 10:15:16,980 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:15:18] 2025-06-04 10:15:17,019 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:15:18]  *** Error codes and diagnostics ***
[2025-06-04 06:15:18]     "exeErrorCode": 0,
[2025-06-04 06:15:18]     "exeErrorDiag": "",
[2025-06-04 06:15:18]     "pilotErrorCode": 0,
[2025-06-04 06:15:18]     "pilotErrorDiag": "",
[2025-06-04 06:15:18]  *** Listing of results directory ***
[2025-06-04 06:15:18] total 389640
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 06:15:18] -rwx------ 1 boincer umatlas     37140 Jun  3 23:07 runpilot2-wrapper.sh
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:07 queuedata.json
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas       100 Jun  4 04:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:15:18] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 04:21 run_atlas
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas       105 Jun  4 04:21 job.xml
[2025-06-04 06:15:18] -rw-r--r-- 2 boincer umatlas 214788916 Jun  4 04:21 EVNT.45006593._002049.pool.root.1
[2025-06-04 06:15:18] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:21 start_atlas.sh
[2025-06-04 06:15:18] drwxrwx--x 2 boincer umatlas      4096 Jun  4 04:21 shared
[2025-06-04 06:15:18] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 04:21 input.tar.gz
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas         0 Jun  4 04:21 boinc_lockfile
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 04:21 pandaJob.out
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas    986774 Jun  4 04:23 agis_schedconf.cvmfs.json
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas   1603667 Jun  4 04:23 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:15:18] drwx------ 4 boincer umatlas      4096 Jun  4 04:23 pilot3
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas 178505131 Jun  4 06:13 HITS.45006595._051132.pool.root.1
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas       530 Jun  4 06:13 boinc_task_state.xml
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas      6252 Jun  4 06:13 init_data.xml
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas      1063 Jun  4 06:13 memory_monitor_summary.json
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas    309569 Jun  4 06:14 log.45006595._051132.job.log.tgz.1
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas        95 Jun  4 06:14 pilot_heartbeat.json
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas      7733 Jun  4 06:14 heartbeat.json
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas        27 Jun  4 06:15 wrapper_checkpoint.txt
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 06:15 boinc_mmap_file
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas      4425 Jun  4 06:15 pilotlog.txt
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas    620888 Jun  4 06:15 log.45006595._051132.job.log.1
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas       357 Jun  4 06:15 output.list
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas       620 Jun  4 06:15 runtime_log
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas    952320 Jun  4 06:15 result.tar.gz
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas       657 Jun  4 06:15 TdHKDmKetg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZZaKDmrfQcEm.diag
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 06:15 runtime_log.err
[2025-06-04 06:15:18] -rw-r--r-- 1 boincer umatlas     20885 Jun  4 06:15 stderr.txt
[2025-06-04 06:15:18] HITS file was successfully produced:
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas 178505131 Jun  4 06:13 shared/HITS.pool.root.1
[2025-06-04 06:15:18]  *** Contents of shared directory: ***
[2025-06-04 06:15:18] total 385532
[2025-06-04 06:15:18] -rw-r--r-- 2 boincer umatlas 214788916 Jun  4 04:21 ATLAS.root_0
[2025-06-04 06:15:18] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:21 start_atlas.sh
[2025-06-04 06:15:18] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 04:21 input.tar.gz
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas 178505131 Jun  4 06:13 HITS.pool.root.1
[2025-06-04 06:15:18] -rw------- 1 boincer umatlas    952320 Jun  4 06:15 result.tar.gz
06:15:19 (18953): run_atlas exited; CPU time 29120.540335
06:15:19 (18953): called boinc_finish(0)

</stderr_txt>
]]>

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