Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:24 (399): wrapper (7.7.26015): starting
19:12:24 (399): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:12:24] Arguments: --nthreads 8
[2025-06-04 19:12:24] Threads: 8
[2025-06-04 19:12:24] Checking for CVMFS
[2025-06-04 19:12:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:12:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:12:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:12:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:12:26] 2.11.2.0 12812 33689 103440 146788 3 200 17711079 25165824 2769 130560 0 18189369 99.822 19272924 2254 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 19:12:26] CVMFS is ok
[2025-06-04 19:12:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:12:26] Checking for apptainer binary...
[2025-06-04 19:12:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:12:26] Running /usr/bin/apptainer --version
[2025-06-04 19:12:26] apptainer version 1.3.2-1.el7
[2025-06-04 19:12:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:12:28] cg-vwn215.simple-grid.lan
[2025-06-04 19:12:28] apptainer works
[2025-06-04 19:12:28] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:12:28] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:12:28] Starting ATLAS job with PandaID=6678286480
[2025-06-04 19:12:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:53:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:53:50] 2025-06-04 20:57:32,710 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:53:50] 2025-06-04 20:57:32,711 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:53:50] 2025-06-04 20:57:32,711 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:53:50] 2025-06-04 20:57:32,715 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:53:50] 2025-06-04 20:57:32,716 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,718 | INFO     | sum of deviations: 14892771311.999983
[2025-06-04 23:53:50] 2025-06-04 20:57:32,718 | INFO     | mean x: 1749063886.0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,718 | INFO     | mean y: 2458762.164383562
[2025-06-04 23:53:50] 2025-06-04 20:57:32,718 | INFO     | -- intersect: -7995505886.089264
[2025-06-04 23:53:50] 2025-06-04 20:57:32,718 | INFO     | intersect: -7995505886.089264
[2025-06-04 23:53:50] 2025-06-04 20:57:32,719 | INFO     | chi2: 2.3800575108978843
[2025-06-04 23:53:50] 2025-06-04 20:57:32,719 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 23:53:50] 2025-06-04 20:57:32,721 | INFO     | sum of deviations: 28808572815.49993
[2025-06-04 23:53:50] 2025-06-04 20:57:32,721 | INFO     | mean x: 1749063733.5
[2025-06-04 23:53:50] 2025-06-04 20:57:32,721 | INFO     | mean y: 2468309.855140187
[2025-06-04 23:53:50] 2025-06-04 20:57:32,721 | INFO     | -- intersect: -16578775986.458544
[2025-06-04 23:53:50] 2025-06-04 20:57:32,721 | INFO     | intersect: -16578775986.458544
[2025-06-04 23:53:50] 2025-06-04 20:57:32,722 | INFO     | chi2: 1.6110491597864014
[2025-06-04 23:53:50] 2025-06-04 20:57:32,722 | INFO     | current chi2=1.6110491597864014 (change=32.310494498150675 %)
[2025-06-04 23:53:50] 2025-06-04 20:57:32,722 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,724 | INFO     | sum of deviations: 28107507592.999977
[2025-06-04 23:53:50] 2025-06-04 20:57:32,724 | INFO     | mean x: 1749063581.0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,724 | INFO     | mean y: 2467795.933014354
[2025-06-04 23:53:50] 2025-06-04 20:57:32,724 | INFO     | -- intersect: -17364363834.789772
[2025-06-04 23:53:50] 2025-06-04 20:57:32,724 | INFO     | intersect: -17364363834.789772
[2025-06-04 23:53:50] 2025-06-04 20:57:32,725 | INFO     | chi2: 1.6120159852321192
[2025-06-04 23:53:50] 2025-06-04 20:57:32,725 | INFO     | current chi2=1.6120159852321192 (change=-0.06001216287192537 %)
[2025-06-04 23:53:50] 2025-06-04 20:57:32,725 | INFO     | right removable region: 208
[2025-06-04 23:53:50] 2025-06-04 20:57:32,725 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 23:53:50] 2025-06-04 20:57:32,727 | INFO     | sum of deviations: -22820846762.000004
[2025-06-04 23:53:50] 2025-06-04 20:57:32,727 | INFO     | mean x: 1749064038.5
[2025-06-04 23:53:50] 2025-06-04 20:57:32,727 | INFO     | mean y: 2484949.3644859814
[2025-06-04 23:53:50] 2025-06-04 20:57:32,727 | INFO     | -- intersect: 13137398074.618134
[2025-06-04 23:53:50] 2025-06-04 20:57:32,727 | INFO     | intersect: 13137398074.618134
[2025-06-04 23:53:50] 2025-06-04 20:57:32,728 | INFO     | chi2: 0.8254364687162089
[2025-06-04 23:53:50] 2025-06-04 20:57:32,728 | INFO     | current chi2=0.8254364687162089 (change=65.31863348105357 %)
[2025-06-04 23:53:50] 2025-06-04 20:57:32,728 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,730 | INFO     | sum of deviations: -24921156977.0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,730 | INFO     | mean x: 1749064191.0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,730 | INFO     | mean y: 2486460.3779904307
[2025-06-04 23:53:50] 2025-06-04 20:57:32,730 | INFO     | -- intersect: 15400567801.221518
[2025-06-04 23:53:50] 2025-06-04 20:57:32,730 | INFO     | intersect: 15400567801.221518
[2025-06-04 23:53:50] 2025-06-04 20:57:32,731 | INFO     | chi2: 0.8073043729140339
[2025-06-04 23:53:50] 2025-06-04 20:57:32,731 | INFO     | current chi2=0.8073043729140339 (change=2.196667640621165 %)
[2025-06-04 23:53:50] 2025-06-04 20:57:32,731 | INFO     | left removable region: 20
[2025-06-04 23:53:50] 2025-06-04 20:57:32,731 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,732 | INFO     | sum of deviations: -9032083584.000002
[2025-06-04 23:53:50] 2025-06-04 20:57:32,733 | INFO     | mean x: 1749064160.5
[2025-06-04 23:53:50] 2025-06-04 20:57:32,733 | INFO     | mean y: 2496092.010638298
[2025-06-04 23:53:50] 2025-06-04 20:57:32,733 | INFO     | -- intersect: 7669999980.338645
[2025-06-04 23:53:50] 2025-06-04 20:57:32,733 | INFO     | intersect: 7669999980.338645
[2025-06-04 23:53:50] 2025-06-04 20:57:32,733 | INFO     | chi2: 0.016845624282084783
[2025-06-04 23:53:50] 2025-06-04 20:57:32,733 | INFO     | -- intersect: 7669999980.338645
[2025-06-04 23:53:50] 2025-06-04 20:57:32,734 | INFO     | current memory leak: -4.38 B/s (using 188 data points, chi2=0.02)
[2025-06-04 23:53:50] 2025-06-04 20:57:32,734 | INFO     | ..............................
[2025-06-04 23:53:50] 2025-06-04 20:57:32,735 | INFO     | . Timing measurements:
[2025-06-04 23:53:50] 2025-06-04 20:57:32,735 | INFO     | . get job = 0 s
[2025-06-04 23:53:50] 2025-06-04 20:57:32,735 | INFO     | . initial setup = 2 s
[2025-06-04 23:53:50] 2025-06-04 20:57:32,735 | INFO     | . payload setup = 15 s
[2025-06-04 23:53:50] 2025-06-04 20:57:32,735 | INFO     | . stage-in = 0 s
[2025-06-04 23:53:50] 2025-06-04 20:57:32,735 | INFO     | . payload execution = 13341 s
[2025-06-04 23:53:50] 2025-06-04 20:57:32,735 | INFO     | . stage-out = 3 s
[2025-06-04 23:53:50] 2025-06-04 20:57:32,735 | INFO     | . log creation = 1 s
[2025-06-04 23:53:50] 2025-06-04 20:57:32,735 | INFO     | ..............................
[2025-06-04 23:53:50] 2025-06-04 20:57:32,856 | INFO     | 
[2025-06-04 23:53:50] 2025-06-04 20:57:32,856 | INFO     | job summary report
[2025-06-04 23:53:50] 2025-06-04 20:57:32,856 | INFO     | --------------------------------------------------
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | PanDA job id: 6678286480
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | task id: 45006595
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | errors: (none)
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | pilot state: finished 
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | transexitcode: 0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | exeerrorcode: 0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | exeerrordiag: 
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | exitcode: 0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | exitmsg: OK
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | cpuconsumptiontime: 51223 s
[2025-06-04 23:53:50] 2025-06-04 20:57:32,857 | INFO     | nevents: 400
[2025-06-04 23:53:50] 2025-06-04 20:57:32,858 | INFO     | neventsw: 0
[2025-06-04 23:53:50] 2025-06-04 20:57:32,858 | INFO     | pid: 13707
[2025-06-04 23:53:50] 2025-06-04 20:57:32,858 | INFO     | pgrp: 13707
[2025-06-04 23:53:50] 2025-06-04 20:57:32,858 | INFO     | corecount: 8
[2025-06-04 23:53:50] 2025-06-04 20:57:32,858 | INFO     | event service: False
[2025-06-04 23:53:50] 2025-06-04 20:57:32,858 | INFO     | sizes: {0: 2397116, 1: 2397371, 2: 2397371, 11: 2397605, 12: 2397633, 13361: 2427373, 13365: 2436316, 13366: 2436372, 13455: 2436542}
[2025-06-04 23:53:50] 2025-06-04 20:57:32,858 | INFO     | --------------------------------------------------
[2025-06-04 23:53:50] 2025-06-04 20:57:32,858 | INFO     | 
[2025-06-04 23:53:50] 2025-06-04 20:57:32,858 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-06-04 23:53:50] 2025-06-04 20:57:33,298 | INFO     | PID=5138 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 23:53:50] 2025-06-04 20:57:33,298 | INFO     | .. there are 9 such processes running
[2025-06-04 23:53:50] 2025-06-04 20:57:33,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,302 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,302 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,302 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,302 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,302 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:53:50] 2025-06-04 20:57:33,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:53:50] 2025-06-04 20:57:33,304 | INFO     | job 6678286480 has completed (purged errors)
[2025-06-04 23:53:50] 2025-06-04 20:57:33,304 | INFO     | overall cleanup function is called
[2025-06-04 23:53:50] 2025-06-04 20:57:34,314 | INFO     | --- collectZombieJob: --- 10, [13707]
[2025-06-04 23:53:50] 2025-06-04 20:57:34,314 | INFO     | zombie collector waiting for pid 13707
[2025-06-04 23:53:50] 2025-06-04 20:57:34,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:53:50] 2025-06-04 20:57:34,314 | INFO     | collected zombie processes
[2025-06-04 23:53:50] 2025-06-04 20:57:34,314 | INFO     | will attempt to kill all subprocesses of pid=13707
[2025-06-04 23:53:50] 2025-06-04 20:57:34,455 | INFO     | process IDs to be killed: [13707] (in reverse order)
[2025-06-04 23:53:50] 2025-06-04 20:57:35,005 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:53:50] 2025-06-04 20:57:35,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:53:50] 2025-06-04 20:57:35,009 | INFO     | did not find any defunct processes belonging to 13707
[2025-06-04 23:53:50] 2025-06-04 20:57:35,012 | INFO     | did not find any defunct processes belonging to 13707
[2025-06-04 23:53:50] 2025-06-04 20:57:35,013 | INFO     | ready for new job
[2025-06-04 23:53:50] 2025-06-04 20:57:35,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:53:50] 2025-06-04 20:57:35,018 | INFO     | **************************************
[2025-06-04 23:53:50] 2025-06-04 20:57:35,019 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:53:50] 2025-06-04 20:57:35,019 | INFO     | **************************************
[2025-06-04 23:53:50] 2025-06-04 20:57:35,019 | INFO     | 
[2025-06-04 23:53:50] 2025-06-04 20:57:35,019 | INFO     | pilot is running in a VM
[2025-06-04 23:53:50] 2025-06-04 20:57:35,020 | INFO     | architecture information:
[2025-06-04 23:53:50] 2025-06-04 20:57:35,032 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:53:50] 2025-06-04 20:57:35,220 | INFO     | cat /etc/os-release:
[2025-06-04 23:53:50] NAME="CentOS Linux"
[2025-06-04 23:53:50] VERSION="7 (Core)"
[2025-06-04 23:53:50] ID="centos"
[2025-06-04 23:53:50] ID_LIKE="rhel fedora"
[2025-06-04 23:53:50] VERSION_ID="7"
[2025-06-04 23:53:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:53:50] ANSI_COLOR="0;31"
[2025-06-04 23:53:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:53:50] HOME_URL="https://www.centos.org/"
[2025-06-04 23:53:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:53:50] 
[2025-06-04 23:53:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:53:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:53:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:53:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:53:50] 
[2025-06-04 23:53:50] 2025-06-04 20:57:35,221 | INFO     | **************************************
[2025-06-04 23:53:50] 2025-06-04 20:57:35,724 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-06-04 23:53:50] 2025-06-04 20:57:35,941 | INFO     | sufficient remaining disk space (497071161344 B)
[2025-06-04 23:53:50] 2025-06-04 20:57:35,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:53:50] 2025-06-04 20:57:35,942 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:53:50] 2025-06-04 20:57:35,942 | INFO     | update_server=False
[2025-06-04 23:53:50] 2025-06-04 20:57:35,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:53:50] 2025-06-04 20:57:35,943 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:53:50] 2025-06-04 20:57:35,943 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:53:50] 2025-06-04 20:57:35,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:53:50] 2025-06-04 20:57:35,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:53:50] 2025-06-04 20:57:35,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:53:50] 2025-06-04 20:57:36,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:53:50] 2025-06-04 20:57:36,656 | INFO     | all data control threads have been joined
[2025-06-04 23:53:50] 2025-06-04 20:57:36,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:53:50] 2025-06-04 20:57:36,724 | INFO     | aborting loop
[2025-06-04 23:53:50] 2025-06-04 20:57:36,950 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:36,967 | INFO     | all job control threads have been joined
[2025-06-04 23:53:50] 2025-06-04 20:57:37,220 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:37,223 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:37,285 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:37,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:37,288 | INFO     | all payload control threads have been joined
[2025-06-04 23:53:50] 2025-06-04 20:57:37,358 | INFO     | [job] validate thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:37,663 | INFO     | [data] control thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:37,729 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:37,797 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:37,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:53:50] 2025-06-04 20:57:37,973 | INFO     | [job] control thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:38,138 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:38,262 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:38,294 | INFO     | [payload] control thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:38,341 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:38,877 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:39,957 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:53:50] 2025-06-04 20:57:40,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054948439872)>', '<ExcThread(monitor, started 140054362048256)>']
[2025-06-04 23:53:50] 2025-06-04 20:57:40,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:53:50] 2025-06-04 20:57:40,973 | INFO     | [monitor] control thread has ended
[2025-06-04 23:53:50] 2025-06-04 20:57:45,607 | INFO     | all workflow threads have been joined
[2025-06-04 23:53:50] 2025-06-04 20:57:45,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:53:50] 2025-06-04 20:57:45,607 | INFO     | traces error code: 0
[2025-06-04 23:53:50] 2025-06-04 20:57:45,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:53:50] 2025-06-04 20:57:45,844 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:53:50] 2025-06-04 20:57:45,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:53:50] 2025-06-04 20:57:45,852 [wrapper] pilotpid: 5138
[2025-06-04 23:53:50] 2025-06-04 20:57:45,856 [wrapper] Pilot exit status: 0
[2025-06-04 23:53:50] 2025-06-04 20:57:46,040 [wrapper] pandaids: 6678286480
[2025-06-04 23:53:50] 2025-06-04 20:57:46,104 [wrapper] cleanup supervisor_pilot 28048 5139
[2025-06-04 23:53:50] 2025-06-04 20:57:46,121 [wrapper] Test setup, not cleaning
[2025-06-04 23:53:50] 2025-06-04 20:57:46,125 [wrapper] apfmon messages muted
[2025-06-04 23:53:50] 2025-06-04 20:57:46,138 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:53:50] 2025-06-04 20:57:46,201 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:53:50]  *** Error codes and diagnostics ***
[2025-06-04 23:53:50]     "exeErrorCode": 0,
[2025-06-04 23:53:50]     "exeErrorDiag": "",
[2025-06-04 23:53:50]     "pilotErrorCode": 0,
[2025-06-04 23:53:50]     "pilotErrorDiag": "",
[2025-06-04 23:53:50]  *** Listing of results directory ***
[2025-06-04 23:53:50] total 390800
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-04 23:53:50] -rwx------. 1 boinc boinc     37140 Jun  4 05:16 runpilot2-wrapper.sh
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:16 queuedata.json
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc       100 Jun  4 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:53:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 19:12 run_atlas
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc       105 Jun  4 19:12 job.xml
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc      6393 Jun  4 19:12 init_data.xml
[2025-06-04 23:53:50] -rw-r--r--. 2 boinc boinc 217472743 Jun  4 19:12 EVNT.45006593._002060.pool.root.1
[2025-06-04 23:53:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 19:12 start_atlas.sh
[2025-06-04 23:53:50] drwxrwx--x. 2 boinc boinc        68 Jun  4 19:12 shared
[2025-06-04 23:53:50] -rw-r--r--. 2 boinc boinc    508879 Jun  4 19:12 input.tar.gz
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc         0 Jun  4 19:12 boinc_lockfile
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc      2525 Jun  4 19:12 pandaJob.out
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc    990984 Jun  4 19:12 agis_schedconf.cvmfs.json
[2025-06-04 23:53:50] drwx------. 4 boinc boinc      4096 Jun  4 19:12 pilot3
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc 175809520 Jun  4 22:54 HITS.45006595._051408.pool.root.1
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc       531 Jun  4 22:54 boinc_task_state.xml
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc      1018 Jun  4 22:55 memory_monitor_summary.json
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc   1598969 Jun  4 22:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc    370262 Jun  4 22:56 log.45006595._051408.job.log.tgz.1
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc        95 Jun  4 22:57 pilot_heartbeat.json
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc      7692 Jun  4 22:57 heartbeat.json
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc      4540 Jun  4 22:57 pilotlog.txt
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc   1167827 Jun  4 22:57 log.45006595._051408.job.log.1
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc       357 Jun  4 22:57 output.list
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:57 runtime_log
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc   1556480 Jun  4 22:57 result.tar.gz
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc      8673 Jun  4 22:57 runtime_log.err
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc       656 Jun  4 22:57 rrSKDmRntg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDml2mKDmTL8fFn.diag
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc      8192 Jun  4 23:53 boinc_mmap_file
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc        28 Jun  4 23:53 wrapper_checkpoint.txt
[2025-06-04 23:53:50] -rw-r--r--. 1 boinc boinc     20608 Jun  4 23:53 stderr.txt
[2025-06-04 23:53:50] HITS file was successfully produced:
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc 175809520 Jun  4 22:54 shared/HITS.pool.root.1
[2025-06-04 23:53:50]  *** Contents of shared directory: ***
[2025-06-04 23:53:50] total 386104
[2025-06-04 23:53:50] -rw-r--r--. 2 boinc boinc 217472743 Jun  4 19:12 ATLAS.root_0
[2025-06-04 23:53:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 19:12 start_atlas.sh
[2025-06-04 23:53:50] -rw-r--r--. 2 boinc boinc    508879 Jun  4 19:12 input.tar.gz
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc 175809520 Jun  4 22:54 HITS.pool.root.1
[2025-06-04 23:53:50] -rw-------. 1 boinc boinc   1556480 Jun  4 22:57 result.tar.gz
23:53:52 (399): run_atlas exited; CPU time 51401.823247
23:53:52 (399): called boinc_finish(0)

</stderr_txt>
]]>

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