Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:35:45 (2471396): wrapper (7.7.26015): starting
20:35:45 (2471396): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 20:35:45] Arguments: --nthreads 8
[2025-06-04 20:35:45] Threads: 8
[2025-06-04 20:35:45] Checking for CVMFS
[2025-06-04 20:35:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:35:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:35:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:35:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:35:46] 2.12.7.0 1328384 2935 70024 146791 2 56 3204057 4096001 0 65024 0 2830883 99.992 685755 2170 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 20:35:46] CVMFS is ok
[2025-06-04 20:35:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:35:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:35:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 20:35:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 20:35:46] Further information can be found at the LHC@home message board.
[2025-06-04 20:35:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:35:46] Checking for apptainer binary...
[2025-06-04 20:35:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:35:46] Running /usr/bin/apptainer --version
[2025-06-04 20:35:46] apptainer version 1.3.6-1.el8
[2025-06-04 20:35:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:35:46] localhost.localdomain
[2025-06-04 20:35:46] apptainer works
[2025-06-04 20:35:46] Set ATHENA_PROC_NUMBER=8
[2025-06-04 20:35:46] Set ATHENA_CORE_NUMBER=8
[2025-06-04 20:35:46] Starting ATLAS job with PandaID=6678286406
[2025-06-04 20:35:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:45:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:45:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 21:45:09]  is_altstaged=None
[2025-06-04 21:45:09]  is_tar=False
[2025-06-04 21:45:09]  lfn=log.45006595._051334.job.log.tgz.1
[2025-06-04 21:45:09]  mtime=0
[2025-06-04 21:45:09]  protocol_id=None
[2025-06-04 21:45:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 21:45:09]  replicas=None
[2025-06-04 21:45:09]  scope=mc23_13p6TeV
[2025-06-04 21:45:09]  status=None
[2025-06-04 21:45:09]  status_code=0
[2025-06-04 21:45:09]  storage_token=
[2025-06-04 21:45:09]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678286406/log.45006595._051334.job.log.tgz.1
[2025-06-04 21:45:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/ac/log.45006595._051334.job.log.tgz.1
[2025-06-04 21:45:09]  workdir=None
[2025-06-04 21:45:09] ]
[2025-06-04 21:45:09] 2025-06-04 19:44:43,710 | INFO     | transferring file log.45006595._051334.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678286406/log.45006595._051334.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 21:45:09] 2025-06-04 19:44:43,710 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678286406/log.45006595._051334.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._051334.job
[2025-06-04 21:45:09] 2025-06-04 19:44:43,722 | INFO     | adding to output.list: log.45006595._051334.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/ac/log.45006595._051334.job.log.tg
[2025-06-04 21:45:09] 2025-06-04 19:44:43,723 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:45:09] 2025-06-04 19:44:43,723 | INFO     | summary of transferred files:
[2025-06-04 21:45:09] 2025-06-04 19:44:43,723 | INFO     |  -- lfn=log.45006595._051334.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:45:09] 2025-06-04 19:44:43,723 | INFO     | stage-out finished correctly
[2025-06-04 21:45:09] 2025-06-04 19:44:43,780 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:45:09] 2025-06-04 19:44:44,529 | INFO     | job 6678286406 has state=finished
[2025-06-04 21:45:09] 2025-06-04 19:44:44,529 | INFO     | preparing for final server update for job 6678286406 in state='finished'
[2025-06-04 21:45:09] 2025-06-04 19:44:44,529 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:45:09] 2025-06-04 19:44:44,529 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:45:09] 2025-06-04 19:44:44,529 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:45:09] 2025-06-04 19:44:44,529 | INFO     | job 6678286406 has finished - writing final server update
[2025-06-04 21:45:09] 2025-06-04 19:44:44,530 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:45:09] 2025-06-04 19:44:44,531 | INFO     | executing command: lscpu
[2025-06-04 21:45:09] 2025-06-04 19:44:44,546 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:45:09] 2025-06-04 19:44:45,255 | INFO     | 4133s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 21:45:09] 2025-06-04 19:44:45,787 | INFO     | monitor loop #307: job 0:6678286406 is in state 'finished'
[2025-06-04 21:45:09] 2025-06-04 19:44:45,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:45:09] 2025-06-04 19:44:48,290 | INFO     | monitor loop #308: job 0:6678286406 is in state 'finished'
[2025-06-04 21:45:09] 2025-06-04 19:44:48,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:45:09] 2025-06-04 19:44:50,427 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 21:45:09] 2025-06-04 19:44:50,427 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678286406/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:45:09] 2025-06-04 19:44:50,428 | INFO     | extracted standard info from prmon json
[2025-06-04 21:45:09] 2025-06-04 19:44:50,428 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:45:09] 2025-06-04 19:44:50,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:45:09] 2025-06-04 19:44:50,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:45:09] 2025-06-04 19:44:50,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:45:09] 2025-06-04 19:44:50,430 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:45:09] 2025-06-04 19:44:50,430 | INFO     | sum of square deviations: 70364110.0
[2025-06-04 21:45:09] 2025-06-04 19:44:50,430 | INFO     | sum of deviations: -11550966649.0
[2025-06-04 21:45:09] 2025-06-04 19:44:50,431 | INFO     | mean x: 1749064318.0
[2025-06-04 21:45:09] 2025-06-04 19:44:50,431 | INFO     | mean y: 2776260.4426229508
[2025-06-04 21:45:09] 2025-06-04 19:44:50,431 | INFO     | -- intersect: 287129034294.17505
[2025-06-04 21:45:09] 2025-06-04 19:44:50,431 | INFO     | intersect: 287129034294.17505
[2025-06-04 21:45:09] 2025-06-04 19:44:50,431 | INFO     | chi2: 0.10195819503576026
[2025-06-04 21:45:09] 2025-06-04 19:44:50,431 | INFO     | -- intersect: 287129034294.17505
[2025-06-04 21:45:09] 2025-06-04 19:44:50,431 | INFO     | current memory leak: -164.16 B/s (using 61 data points, chi2=0.10)
[2025-06-04 21:45:09] 2025-06-04 19:44:50,431 | INFO     | ..............................
[2025-06-04 21:45:09] 2025-06-04 19:44:50,431 | INFO     | . Timing measurements:
[2025-06-04 21:45:09] 2025-06-04 19:44:50,432 | INFO     | . get job = 0 s
[2025-06-04 21:45:09] 2025-06-04 19:44:50,432 | INFO     | . initial setup = 1 s
[2025-06-04 21:45:09] 2025-06-04 19:44:50,432 | INFO     | . payload setup = 6 s
[2025-06-04 21:45:09] 2025-06-04 19:44:50,432 | INFO     | . stage-in = 0 s
[2025-06-04 21:45:09] 2025-06-04 19:44:50,432 | INFO     | . payload execution = 4105 s
[2025-06-04 21:45:09] 2025-06-04 19:44:50,432 | INFO     | . stage-out = 0 s
[2025-06-04 21:45:09] 2025-06-04 19:44:50,432 | INFO     | . log creation = 0 s
[2025-06-04 21:45:09] 2025-06-04 19:44:50,432 | INFO     | ..............................
[2025-06-04 21:45:09] 2025-06-04 19:44:50,814 | INFO     | 
[2025-06-04 21:45:09] 2025-06-04 19:44:50,814 | INFO     | job summary report
[2025-06-04 21:45:09] 2025-06-04 19:44:50,814 | INFO     | --------------------------------------------------
[2025-06-04 21:45:09] 2025-06-04 19:44:50,814 | INFO     | PanDA job id: 6678286406
[2025-06-04 21:45:09] 2025-06-04 19:44:50,814 | INFO     | task id: 45006595
[2025-06-04 21:45:09] 2025-06-04 19:44:50,814 | INFO     | errors: (none)
[2025-06-04 21:45:09] 2025-06-04 19:44:50,814 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:45:09] 2025-06-04 19:44:50,814 | INFO     | pilot state: finished 
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | transexitcode: 0
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | exeerrorcode: 0
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | exeerrordiag: 
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | exitcode: 0
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | exitmsg: OK
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | cpuconsumptiontime: 29006 s
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | nevents: 400
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | neventsw: 0
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | pid: 2481452
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | pgrp: 2481452
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | corecount: 8
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | event service: False
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 4115: 2423277, 4117: 2432274, 4123: 2432388}
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | --------------------------------------------------
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | 
[2025-06-04 21:45:09] 2025-06-04 19:44:50,815 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 21:45:09] 2025-06-04 19:44:50,828 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,830 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:45:09] 2025-06-04 19:44:50,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:45:09] 2025-06-04 19:44:50,830 | INFO     | job 6678286406 has completed (purged errors)
[2025-06-04 21:45:09] 2025-06-04 19:44:50,830 | INFO     | overall cleanup function is called
[2025-06-04 21:45:09] 2025-06-04 19:44:51,837 | INFO     | --- collectZombieJob: --- 10, [2481452]
[2025-06-04 21:45:09] 2025-06-04 19:44:51,838 | INFO     | zombie collector waiting for pid 2481452
[2025-06-04 21:45:09] 2025-06-04 19:44:51,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:45:09] 2025-06-04 19:44:51,838 | INFO     | collected zombie processes
[2025-06-04 21:45:09] 2025-06-04 19:44:51,838 | INFO     | will attempt to kill all subprocesses of pid=2481452
[2025-06-04 21:45:09] 2025-06-04 19:44:51,905 | INFO     | process IDs to be killed: [2481452] (in reverse order)
[2025-06-04 21:45:09] 2025-06-04 19:44:51,933 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:45:09] 2025-06-04 19:44:51,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:45:09] 2025-06-04 19:44:51,935 | INFO     | did not find any defunct processes belonging to 2481452
[2025-06-04 21:45:09] 2025-06-04 19:44:51,937 | INFO     | did not find any defunct processes belonging to 2481452
[2025-06-04 21:45:09] 2025-06-04 19:44:51,937 | INFO     | ready for new job
[2025-06-04 21:45:09] 2025-06-04 19:44:51,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:45:09] 2025-06-04 19:44:51,938 | INFO     | **************************************
[2025-06-04 21:45:09] 2025-06-04 19:44:51,938 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:45:09] 2025-06-04 19:44:51,938 | INFO     | **************************************
[2025-06-04 21:45:09] 2025-06-04 19:44:51,938 | INFO     | 
[2025-06-04 21:45:09] 2025-06-04 19:44:51,939 | INFO     | pilot is running in a VM
[2025-06-04 21:45:09] 2025-06-04 19:44:51,939 | INFO     | architecture information:
[2025-06-04 21:45:09] 2025-06-04 19:44:51,939 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:45:09] 2025-06-04 19:44:51,948 | INFO     | cat /etc/os-release:
[2025-06-04 21:45:09] NAME="CentOS Linux"
[2025-06-04 21:45:09] VERSION="7 (Core)"
[2025-06-04 21:45:09] ID="centos"
[2025-06-04 21:45:09] ID_LIKE="rhel fedora"
[2025-06-04 21:45:09] VERSION_ID="7"
[2025-06-04 21:45:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:45:09] ANSI_COLOR="0;31"
[2025-06-04 21:45:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:45:09] HOME_URL="https://www.centos.org/"
[2025-06-04 21:45:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:45:09] 
[2025-06-04 21:45:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:45:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:45:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:45:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:45:09] 
[2025-06-04 21:45:09] 2025-06-04 19:44:51,948 | INFO     | **************************************
[2025-06-04 21:45:09] 2025-06-04 19:44:52,451 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 21:45:09] 2025-06-04 19:44:52,462 | INFO     | sufficient remaining disk space (42107666432 B)
[2025-06-04 21:45:09] 2025-06-04 19:44:52,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:45:09] 2025-06-04 19:44:52,463 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:45:09] 2025-06-04 19:44:52,463 | INFO     | update_server=False
[2025-06-04 21:45:09] 2025-06-04 19:44:52,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:45:09] 2025-06-04 19:44:52,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:45:09] 2025-06-04 19:44:52,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:45:09] 2025-06-04 19:44:52,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:45:09] 2025-06-04 19:44:52,464 | INFO     | aborting loop
[2025-06-04 21:45:09] 2025-06-04 19:44:52,464 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:45:09] 2025-06-04 19:44:52,464 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:45:09] 2025-06-04 19:44:52,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:45:09] 2025-06-04 19:44:52,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:45:09] 2025-06-04 19:44:53,034 | INFO     | all payload control threads have been joined
[2025-06-04 21:45:09] 2025-06-04 19:44:53,042 | INFO     | all job control threads have been joined
[2025-06-04 21:45:09] 2025-06-04 19:44:53,216 | INFO     | all data control threads have been joined
[2025-06-04 21:45:09] 2025-06-04 19:44:53,464 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:53,464 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:53,468 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:53,718 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:53,799 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:53,954 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:54,040 | INFO     | [payload] control thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:54,047 | INFO     | [job] control thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:54,221 | INFO     | [data] control thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:54,342 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:54,343 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:45:09] 2025-06-04 19:44:54,467 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:54,470 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:54,491 | INFO     | [job] validate thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:54,584 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:44:58,348 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:45:02,783 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:45:09] 2025-06-04 19:45:03,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:45:09] 2025-06-04 19:45:04,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555384940352)>', '<ExcThread(monitor, started 140554767668992)>']
[2025-06-04 21:45:09] 2025-06-04 19:45:04,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:45:09] 2025-06-04 19:45:04,517 | INFO     | [monitor] control thread has ended
[2025-06-04 21:45:09] 2025-06-04 19:45:09,218 | INFO     | all workflow threads have been joined
[2025-06-04 21:45:09] 2025-06-04 19:45:09,218 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:45:09] 2025-06-04 19:45:09,218 | INFO     | traces error code: 0
[2025-06-04 21:45:09] 2025-06-04 19:45:09,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:45:09] 2025-06-04 19:45:09,299 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:45:09] 2025-06-04 19:45:09,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:45:09] 2025-06-04 19:45:09,303 [wrapper] pilotpid: 2475033
[2025-06-04 21:45:09] 2025-06-04 19:45:09,306 [wrapper] Pilot exit status: 0
[2025-06-04 21:45:09] 2025-06-04 19:45:09,315 [wrapper] pandaids: 6678286406
[2025-06-04 21:45:09] 2025-06-04 19:45:09,335 [wrapper] cleanup supervisor_pilot 2492889 2475034
[2025-06-04 21:45:09] 2025-06-04 19:45:09,338 [wrapper] Test setup, not cleaning
[2025-06-04 21:45:09] 2025-06-04 19:45:09,340 [wrapper] apfmon messages muted
[2025-06-04 21:45:09] 2025-06-04 19:45:09,343 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:45:09] 2025-06-04 19:45:09,345 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:45:09]  *** Error codes and diagnostics ***
[2025-06-04 21:45:09]     "exeErrorCode": 0,
[2025-06-04 21:45:09]     "exeErrorDiag": "",
[2025-06-04 21:45:09]     "pilotErrorCode": 0,
[2025-06-04 21:45:09]     "pilotErrorDiag": "",
[2025-06-04 21:45:09]  *** Listing of results directory ***
[2025-06-04 21:45:09] total 395716
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:13 queuedata.json
[2025-06-04 21:45:09] -rwx------. 1 boinc boinc     37140 Jun  4 05:13 runpilot2-wrapper.sh
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc       100 Jun  4 20:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:45:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 20:35 run_atlas
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc       105 Jun  4 20:35 job.xml
[2025-06-04 21:45:09] -rw-r--r--. 2 boinc boinc 216580658 Jun  4 20:35 EVNT.45006593._002057.pool.root.1
[2025-06-04 21:45:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:35 start_atlas.sh
[2025-06-04 21:45:09] drwxrwx--x. 2 boinc boinc        68 Jun  4 20:35 shared
[2025-06-04 21:45:09] -rw-r--r--. 2 boinc boinc    508882 Jun  4 20:35 input.tar.gz
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc      6076 Jun  4 20:35 init_data.xml
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc         0 Jun  4 20:35 boinc_lockfile
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc      2525 Jun  4 20:35 pandaJob.out
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc    990984 Jun  4 20:35 agis_schedconf.cvmfs.json
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc   1598969 Jun  4 20:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:45:09] drwx------. 4 boinc boinc      4096 Jun  4 20:35 pilot3
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc 183433120 Jun  4 21:44 HITS.45006595._051334.pool.root.1
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc       530 Jun  4 21:44 boinc_task_state.xml
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc      1035 Jun  4 21:44 memory_monitor_summary.json
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc        95 Jun  4 21:44 pilot_heartbeat.json
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc    289182 Jun  4 21:44 log.45006595._051334.job.log.tgz.1
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc      7736 Jun  4 21:44 heartbeat.json
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:44 boinc_mmap_file
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc        27 Jun  4 21:44 wrapper_checkpoint.txt
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc      4610 Jun  4 21:45 pilotlog.txt
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc    398779 Jun  4 21:45 log.45006595._051334.job.log.1
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc       357 Jun  4 21:45 output.list
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:45 runtime_log
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc    706560 Jun  4 21:45 result.tar.gz
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc      8662 Jun  4 21:45 runtime_log.err
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc       663 Jun  4 21:45 oT0LDmWktg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwaaKDmTlgwNn.diag
[2025-06-04 21:45:09] -rw-r--r--. 1 boinc boinc     21486 Jun  4 21:45 stderr.txt
[2025-06-04 21:45:09] HITS file was successfully produced:
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc 183433120 Jun  4 21:44 shared/HITS.pool.root.1
[2025-06-04 21:45:09]  *** Contents of shared directory: ***
[2025-06-04 21:45:09] total 391852
[2025-06-04 21:45:09] -rw-r--r--. 2 boinc boinc 216580658 Jun  4 20:35 ATLAS.root_0
[2025-06-04 21:45:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:35 start_atlas.sh
[2025-06-04 21:45:09] -rw-r--r--. 2 boinc boinc    508882 Jun  4 20:35 input.tar.gz
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc 183433120 Jun  4 21:44 HITS.pool.root.1
[2025-06-04 21:45:09] -rw-------. 1 boinc boinc    706560 Jun  4 21:45 result.tar.gz
21:45:10 (2471396): run_atlas exited; CPU time 29030.343976
21:45:10 (2471396): called boinc_finish(0)

</stderr_txt>
]]>

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