Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:01:37 (501292): wrapper (7.7.26015): starting
05:01:37 (501292): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 05:01:37] Arguments: --nthreads 12
[2025-06-04 05:01:37] Threads: 12
[2025-06-04 05:01:37] Checking for CVMFS
[2025-06-04 05:01:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:01:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:01:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:01:37] 2.12.6.0 3367424 23081 457228 146773 3 70 19610319 32935936 7504 16776704 0 86177936 99.604 89119446 32540 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 05:01:37] CVMFS is ok
[2025-06-04 05:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:01:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:01:37] Further information can be found at the LHC@home message board.
[2025-06-04 05:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:01:37] Checking for apptainer binary...
[2025-06-04 05:01:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:01:37] Running /usr/bin/apptainer --version
[2025-06-04 05:01:37] apptainer version 1.4.1-1.el9
[2025-06-04 05:01:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:01:38] c6-2-29-4.aglt2.org
[2025-06-04 05:01:38] apptainer works
[2025-06-04 05:01:38] Set ATHENA_PROC_NUMBER=12
[2025-06-04 05:01:38] Set ATHENA_CORE_NUMBER=12
[2025-06-04 05:01:38] Starting ATLAS job with PandaID=6678285931
[2025-06-04 05:01:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:49:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:49:15]  guid=1f0937a0-9640-4b4f-867d-205d4cac53a3
[2025-06-04 05:49:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 05:49:15]  is_altstaged=None
[2025-06-04 05:49:15]  is_tar=False
[2025-06-04 05:49:15]  lfn=log.45006595._051025.job.log.tgz.1
[2025-06-04 05:49:15]  mtime=0
[2025-06-04 05:49:15]  protocol_id=None
[2025-06-04 05:49:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:49:15]  replicas=None
[2025-06-04 05:49:15]  scope=mc23_13p6TeV
[2025-06-04 05:49:15]  status=None
[2025-06-04 05:49:15]  status_code=0
[2025-06-04 05:49:15]  storage_token=
[2025-06-04 05:49:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678285931/log.45006595._051025.job.log.tgz.1
[2025-06-04 05:49:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/3c/log.45006595._051025.job.log.tgz.1
[2025-06-04 05:49:15]  workdir=None
[2025-06-04 05:49:15] ]
[2025-06-04 05:49:15] 2025-06-04 09:48:48,543 | INFO     | transferring file log.45006595._051025.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678285931/log.45006595._051025.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:49:15] 2025-06-04 09:48:48,543 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678285931/log.45006595._051025.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._051025.job
[2025-06-04 05:49:15] 2025-06-04 09:48:48,560 | INFO     | adding to output.list: log.45006595._051025.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/3c/log.45006595._051025.job.log.tg
[2025-06-04 05:49:15] 2025-06-04 09:48:48,561 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:49:15] 2025-06-04 09:48:48,561 | INFO     | summary of transferred files:
[2025-06-04 05:49:15] 2025-06-04 09:48:48,561 | INFO     |  -- lfn=log.45006595._051025.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:49:15] 2025-06-04 09:48:48,561 | INFO     | stage-out finished correctly
[2025-06-04 05:49:15] 2025-06-04 09:48:49,076 | INFO     | monitor loop #215: job 0:6678285931 is in state 'finished'
[2025-06-04 05:49:15] 2025-06-04 09:48:49,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:49:15] 2025-06-04 09:48:51,579 | INFO     | monitor loop #216: job 0:6678285931 is in state 'finished'
[2025-06-04 05:49:15] 2025-06-04 09:48:51,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:49:15] 2025-06-04 09:48:51,754 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:49:15] 2025-06-04 09:48:52,499 | INFO     | job 6678285931 has state=finished
[2025-06-04 05:49:15] 2025-06-04 09:48:52,499 | INFO     | preparing for final server update for job 6678285931 in state='finished'
[2025-06-04 05:49:15] 2025-06-04 09:48:52,500 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:49:15] 2025-06-04 09:48:52,500 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:49:15] 2025-06-04 09:48:52,500 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:49:15] 2025-06-04 09:48:52,500 | INFO     | job 6678285931 has finished - writing final server update
[2025-06-04 05:49:15] 2025-06-04 09:48:52,500 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:49:15] 2025-06-04 09:48:52,515 | INFO     | executing command: lscpu
[2025-06-04 05:49:15] 2025-06-04 09:48:52,578 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:49:15] 2025-06-04 09:48:54,085 | INFO     | monitor loop #217: job 0:6678285931 is in state 'finished'
[2025-06-04 05:49:15] 2025-06-04 09:48:54,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:49:15] 2025-06-04 09:48:55,627 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 05:49:15] 2025-06-04 09:48:55,628 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678285931/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:49:15] 2025-06-04 09:48:55,629 | INFO     | extracted standard info from prmon json
[2025-06-04 05:49:15] 2025-06-04 09:48:55,629 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:49:15] 2025-06-04 09:48:55,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:49:15] 2025-06-04 09:48:55,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:49:15] 2025-06-04 09:48:55,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:49:15] 2025-06-04 09:48:55,631 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:49:15] 2025-06-04 09:48:55,631 | INFO     | sum of square deviations: 18381740.0
[2025-06-04 05:49:15] 2025-06-04 09:48:55,631 | INFO     | sum of deviations: 2194281447.0
[2025-06-04 05:49:15] 2025-06-04 09:48:55,631 | INFO     | mean x: 1749029194.0
[2025-06-04 05:49:15] 2025-06-04 09:48:55,631 | INFO     | mean y: 2376195.3076923075
[2025-06-04 05:49:15] 2025-06-04 09:48:55,631 | INFO     | -- intersect: -208784295287.1289
[2025-06-04 05:49:15] 2025-06-04 09:48:55,631 | INFO     | intersect: -208784295287.1289
[2025-06-04 05:49:15] 2025-06-04 09:48:55,632 | INFO     | chi2: 0.6479906997945506
[2025-06-04 05:49:15] 2025-06-04 09:48:55,632 | INFO     | -- intersect: -208784295287.1289
[2025-06-04 05:49:15] 2025-06-04 09:48:55,632 | INFO     | current memory leak: 119.37 B/s (using 39 data points, chi2=0.65)
[2025-06-04 05:49:15] 2025-06-04 09:48:55,632 | INFO     | ..............................
[2025-06-04 05:49:15] 2025-06-04 09:48:55,632 | INFO     | . Timing measurements:
[2025-06-04 05:49:15] 2025-06-04 09:48:55,632 | INFO     | . get job = 0 s
[2025-06-04 05:49:15] 2025-06-04 09:48:55,632 | INFO     | . initial setup = 2 s
[2025-06-04 05:49:15] 2025-06-04 09:48:55,632 | INFO     | . payload setup = 5 s
[2025-06-04 05:49:15] 2025-06-04 09:48:55,632 | INFO     | . stage-in = 0 s
[2025-06-04 05:49:15] 2025-06-04 09:48:55,633 | INFO     | . payload execution = 2797 s
[2025-06-04 05:49:15] 2025-06-04 09:48:55,633 | INFO     | . stage-out = 0 s
[2025-06-04 05:49:15] 2025-06-04 09:48:55,633 | INFO     | . log creation = 0 s
[2025-06-04 05:49:15] 2025-06-04 09:48:55,633 | INFO     | ..............................
[2025-06-04 05:49:15] 2025-06-04 09:48:55,716 | INFO     | 
[2025-06-04 05:49:15] 2025-06-04 09:48:55,716 | INFO     | job summary report
[2025-06-04 05:49:15] 2025-06-04 09:48:55,716 | INFO     | --------------------------------------------------
[2025-06-04 05:49:15] 2025-06-04 09:48:55,716 | INFO     | PanDA job id: 6678285931
[2025-06-04 05:49:15] 2025-06-04 09:48:55,716 | INFO     | task id: 45006595
[2025-06-04 05:49:15] 2025-06-04 09:48:55,716 | INFO     | errors: (none)
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | pilot state: finished 
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | transexitcode: 0
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | exeerrorcode: 0
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | exeerrordiag: 
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | exitcode: 0
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | exitmsg: OK
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | cpuconsumptiontime: 25546 s
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | nevents: 400
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | neventsw: 0
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | pid: 513376
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | pgrp: 513376
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | corecount: 12
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | event service: False
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 2806: 2430749, 2808: 2439690, 2811: 2439874, 2815: 2440044}
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | --------------------------------------------------
[2025-06-04 05:49:15] 2025-06-04 09:48:55,717 | INFO     | 
[2025-06-04 05:49:15] 2025-06-04 09:48:55,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | job 6678285931 has completed (purged errors)
[2025-06-04 05:49:15] 2025-06-04 09:48:55,736 | INFO     | overall cleanup function is called
[2025-06-04 05:49:15] 2025-06-04 09:48:56,744 | INFO     | --- collectZombieJob: --- 10, [513376]
[2025-06-04 05:49:15] 2025-06-04 09:48:56,744 | INFO     | zombie collector waiting for pid 513376
[2025-06-04 05:49:15] 2025-06-04 09:48:56,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:49:15] 2025-06-04 09:48:56,744 | INFO     | collected zombie processes
[2025-06-04 05:49:15] 2025-06-04 09:48:56,744 | INFO     | will attempt to kill all subprocesses of pid=513376
[2025-06-04 05:49:15] 2025-06-04 09:48:56,987 | INFO     | process IDs to be killed: [513376] (in reverse order)
[2025-06-04 05:49:15] 2025-06-04 09:48:57,061 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:49:15] 2025-06-04 09:48:57,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:49:15] 2025-06-04 09:48:57,070 | INFO     | did not find any defunct processes belonging to 513376
[2025-06-04 05:49:15] 2025-06-04 09:48:57,078 | INFO     | did not find any defunct processes belonging to 513376
[2025-06-04 05:49:15] 2025-06-04 09:48:57,079 | INFO     | ready for new job
[2025-06-04 05:49:15] 2025-06-04 09:48:57,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:49:15] 2025-06-04 09:48:57,080 | INFO     | **************************************
[2025-06-04 05:49:15] 2025-06-04 09:48:57,080 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:49:15] 2025-06-04 09:48:57,080 | INFO     | **************************************
[2025-06-04 05:49:15] 2025-06-04 09:48:57,080 | INFO     | 
[2025-06-04 05:49:15] 2025-06-04 09:48:57,094 | INFO     | architecture information:
[2025-06-04 05:49:15] 2025-06-04 09:48:57,095 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:49:15] 2025-06-04 09:48:57,109 | INFO     | cat /etc/os-release:
[2025-06-04 05:49:15] NAME="CentOS Linux"
[2025-06-04 05:49:15] VERSION="7 (Core)"
[2025-06-04 05:49:15] ID="centos"
[2025-06-04 05:49:15] ID_LIKE="rhel fedora"
[2025-06-04 05:49:15] VERSION_ID="7"
[2025-06-04 05:49:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:49:15] ANSI_COLOR="0;31"
[2025-06-04 05:49:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:49:15] HOME_URL="https://www.centos.org/"
[2025-06-04 05:49:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:49:15] 
[2025-06-04 05:49:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:49:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:49:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:49:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:49:15] 
[2025-06-04 05:49:15] 2025-06-04 09:48:57,110 | INFO     | **************************************
[2025-06-04 05:49:15] 2025-06-04 09:48:57,612 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:49:15] 2025-06-04 09:48:57,628 | INFO     | sufficient remaining disk space (76371984384 B)
[2025-06-04 05:49:15] 2025-06-04 09:48:57,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:49:15] 2025-06-04 09:48:57,629 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:49:15] 2025-06-04 09:48:57,629 | INFO     | update_server=False
[2025-06-04 05:49:15] 2025-06-04 09:48:57,629 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:49:15] 2025-06-04 09:48:57,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:49:15] 2025-06-04 09:48:57,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:49:15] 2025-06-04 09:48:57,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:49:15] 2025-06-04 09:48:57,630 | INFO     | aborting loop
[2025-06-04 05:49:15] 2025-06-04 09:48:57,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:49:15] 2025-06-04 09:48:58,122 | INFO     | all payload control threads have been joined
[2025-06-04 05:49:15] 2025-06-04 09:48:58,423 | INFO     | all data control threads have been joined
[2025-06-04 05:49:15] 2025-06-04 09:48:58,549 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:49:15] 2025-06-04 09:48:58,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:49:15] 2025-06-04 09:48:58,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:49:15] 2025-06-04 09:48:58,634 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:58,635 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:58,635 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:59,038 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:59,125 | INFO     | all job control threads have been joined
[2025-06-04 05:49:15] 2025-06-04 09:48:59,127 | INFO     | [payload] control thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:59,213 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:59,428 | INFO     | [data] control thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:59,458 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:59,635 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:59,733 | INFO     | [job] validate thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:59,744 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:48:59,992 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:49:00,057 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:49:00,131 | INFO     | [job] control thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:49:01,847 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:49:08,671 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:49:15] 2025-06-04 09:49:09,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:49:15] 2025-06-04 09:49:09,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140563297122112)>', '<ExcThread(monitor, started 140562501973760)>']
[2025-06-04 05:49:15] 2025-06-04 09:49:10,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:49:15] 2025-06-04 09:49:10,605 | INFO     | [monitor] control thread has ended
[2025-06-04 05:49:15] 2025-06-04 09:49:14,703 | INFO     | all workflow threads have been joined
[2025-06-04 05:49:15] 2025-06-04 09:49:14,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:49:15] 2025-06-04 09:49:14,703 | INFO     | traces error code: 0
[2025-06-04 05:49:15] 2025-06-04 09:49:14,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:49:15] 2025-06-04 09:49:14,870 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:49:15] 2025-06-04 09:49:14,873 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:49:15] 2025-06-04 09:49:14,875 [wrapper] pilotpid: 504930
[2025-06-04 05:49:15] 2025-06-04 09:49:14,878 [wrapper] Pilot exit status: 0
[2025-06-04 05:49:15] 2025-06-04 09:49:14,888 [wrapper] pandaids: 6678285931
[2025-06-04 05:49:15] 2025-06-04 09:49:14,938 [wrapper] cleanup supervisor_pilot  638635 504931
[2025-06-04 05:49:15] 2025-06-04 09:49:14,941 [wrapper] Test setup, not cleaning
[2025-06-04 05:49:15] 2025-06-04 09:49:14,944 [wrapper] apfmon messages muted
[2025-06-04 05:49:15] 2025-06-04 09:49:14,947 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:49:15] 2025-06-04 09:49:14,949 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:49:15]  *** Error codes and diagnostics ***
[2025-06-04 05:49:15]     "exeErrorCode": 0,
[2025-06-04 05:49:15]     "exeErrorDiag": "",
[2025-06-04 05:49:15]     "pilotErrorCode": 0,
[2025-06-04 05:49:15]     "pilotErrorDiag": "",
[2025-06-04 05:49:15]  *** Listing of results directory ***
[2025-06-04 05:49:15] total 387356
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 05:49:15] -rwx------. 1 boincer umatlas     37140 Jun  3 23:01 runpilot2-wrapper.sh
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 23:01 queuedata.json
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas       100 Jun  4 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:49:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 05:01 run_atlas
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas       105 Jun  4 05:01 job.xml
[2025-06-04 05:49:15] -rw-r--r--. 2 boincer umatlas 213884869 Jun  4 05:01 EVNT.45006593._002044.pool.root.1
[2025-06-04 05:49:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:01 start_atlas.sh
[2025-06-04 05:49:15] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 05:01 shared
[2025-06-04 05:49:15] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 05:01 input.tar.gz
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas         0 Jun  4 05:01 boinc_lockfile
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 05:01 pandaJob.out
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas    986774 Jun  4 05:01 agis_schedconf.cvmfs.json
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas   1603667 Jun  4 05:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:49:15] drwx------. 4 boincer umatlas      4096 Jun  4 05:01 pilot3
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas 177624642 Jun  4 05:48 HITS.45006595._051025.pool.root.1
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas       529 Jun  4 05:48 boinc_task_state.xml
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas        95 Jun  4 05:48 pilot_heartbeat.json
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas      1041 Jun  4 05:48 memory_monitor_summary.json
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas    354452 Jun  4 05:48 log.45006595._051025.job.log.tgz.1
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 05:48 init_data.xml
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas      7722 Jun  4 05:48 heartbeat.json
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 05:49 boinc_mmap_file
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas        27 Jun  4 05:49 wrapper_checkpoint.txt
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas      4425 Jun  4 05:49 pilotlog.txt
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas    300640 Jun  4 05:49 log.45006595._051025.job.log.1
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas       357 Jun  4 05:49 output.list
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas       620 Jun  4 05:49 runtime_log
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas    675840 Jun  4 05:49 result.tar.gz
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas       651 Jun  4 05:49 TY8LDmXYtg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1YaKDmnqH30m.diag
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 05:49 runtime_log.err
[2025-06-04 05:49:15] -rw-r--r--. 1 boincer umatlas     21286 Jun  4 05:49 stderr.txt
[2025-06-04 05:49:15] HITS file was successfully produced:
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas 177624642 Jun  4 05:48 shared/HITS.pool.root.1
[2025-06-04 05:49:15]  *** Contents of shared directory: ***
[2025-06-04 05:49:15] total 383516
[2025-06-04 05:49:15] -rw-r--r--. 2 boincer umatlas 213884869 Jun  4 05:01 ATLAS.root_0
[2025-06-04 05:49:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:01 start_atlas.sh
[2025-06-04 05:49:15] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 05:01 input.tar.gz
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas 177624642 Jun  4 05:48 HITS.pool.root.1
[2025-06-04 05:49:15] -rw-------. 1 boincer umatlas    675840 Jun  4 05:49 result.tar.gz
05:49:16 (501292): run_atlas exited; CPU time 25603.124956
05:49:16 (501292): called boinc_finish(0)

</stderr_txt>
]]>

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