Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:48:47 (5712): wrapper (7.7.26015): starting
05:48:47 (5712): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 05:48:47] Arguments: --nthreads 12
[2025-06-04 05:48:47] Threads: 12
[2025-06-04 05:48:47] Checking for CVMFS
[2025-06-04 05:48:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:48:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:48:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:48:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:48:47] 2.12.6.0 5613 1179 108380 146775 1 208 33155992 40960000 13041 16776704 0 5995713 99.916 1686210 39908 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 05:48:47] CVMFS is ok
[2025-06-04 05:48:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:48:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:48:47] Further information can be found at the LHC@home message board.
[2025-06-04 05:48:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:48:47] Checking for apptainer binary...
[2025-06-04 05:48:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:48:47] Running /usr/bin/apptainer --version
[2025-06-04 05:48:47] apptainer version 1.4.1-1.el9
[2025-06-04 05:48:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:48:47] c6-8-12-2.aglt2.org
[2025-06-04 05:48:47] apptainer works
[2025-06-04 05:48:47] Set ATHENA_PROC_NUMBER=12
[2025-06-04 05:48:47] Set ATHENA_CORE_NUMBER=12
[2025-06-04 05:48:47] Starting ATLAS job with PandaID=6678286455
[2025-06-04 05:48:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:50:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:50:01] 2025-06-04 10:49:41,511 | INFO     | number of running child processes to parent process 18117: 1
[2025-06-04 06:50:01] 2025-06-04 10:49:41,512 | INFO     | maximum number of monitored processes: 6
[2025-06-04 06:50:01] 2025-06-04 10:49:41,512 | INFO     | will send heartbeat for job in 'finished' state
[2025-06-04 06:50:01] 2025-06-04 10:49:41,512 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2025-06-04 06:50:01] 2025-06-04 10:49:41,513 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:50:01] 2025-06-04 10:49:41,513 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:50:01] 2025-06-04 10:49:41,513 | INFO     | job 6678286455 has state 'running' - writing heartbeat
[2025-06-04 06:50:01] 2025-06-04 10:49:41,513 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:50:01] 2025-06-04 10:49:41,530 | INFO     | executing command: lscpu
[2025-06-04 06:50:01] 2025-06-04 10:49:41,608 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:50:01] 2025-06-04 10:49:42,767 | INFO     | job 6678286455 has state=finished
[2025-06-04 06:50:01] 2025-06-04 10:49:42,767 | INFO     | preparing for final server update for job 6678286455 in state='finished'
[2025-06-04 06:50:01] 2025-06-04 10:49:42,768 | INFO     | this job has now completed (state=finished)
[2025-06-04 06:50:01] 2025-06-04 10:49:42,768 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:50:01] 2025-06-04 10:49:42,768 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:50:01] 2025-06-04 10:49:42,768 | INFO     | job 6678286455 has finished - writing final server update
[2025-06-04 06:50:01] 2025-06-04 10:49:42,769 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:50:01] 2025-06-04 10:49:42,785 | INFO     | executing command: lscpu
[2025-06-04 06:50:01] 2025-06-04 10:49:44,646 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 06:50:01] 2025-06-04 10:49:44,647 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286455/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:50:01] 2025-06-04 10:49:44,654 | INFO     | extracted standard info from prmon json
[2025-06-04 06:50:01] 2025-06-04 10:49:44,654 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:50:01] 2025-06-04 10:49:44,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:50:01] 2025-06-04 10:49:44,655 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:50:01] 2025-06-04 10:49:44,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:50:01] 2025-06-04 10:49:44,658 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:50:01] 2025-06-04 10:49:44,658 | INFO     | sum of square deviations: 46143940.830188714
[2025-06-04 06:50:01] 2025-06-04 10:49:44,658 | INFO     | sum of deviations: 2088682260.962263
[2025-06-04 06:50:01] 2025-06-04 10:49:44,659 | INFO     | mean x: 1749032456.0566037
[2025-06-04 06:50:01] 2025-06-04 10:49:44,659 | INFO     | mean y: 2385568.679245283
[2025-06-04 06:50:01] 2025-06-04 10:49:44,659 | INFO     | -- intersect: -79166688400.45767
[2025-06-04 06:50:01] 2025-06-04 10:49:44,659 | INFO     | intersect: -79166688400.45767
[2025-06-04 06:50:01] 2025-06-04 10:49:44,659 | INFO     | chi2: 1.0055772407695842
[2025-06-04 06:50:01] 2025-06-04 10:49:44,659 | INFO     | -- intersect: -79166688400.45767
[2025-06-04 06:50:01] 2025-06-04 10:49:44,659 | INFO     | current memory leak: 45.26 B/s (using 53 data points, chi2=1.01)
[2025-06-04 06:50:01] 2025-06-04 10:49:44,706 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:50:01] 2025-06-04 10:49:46,030 | INFO     | PID=9687 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 06:50:01] 2025-06-04 10:49:46,031 | INFO     | .. there are 15 such processes running
[2025-06-04 06:50:01] 2025-06-04 10:49:47,163 | INFO     | monitor loop #266: job 0:6678286455 is in state 'finished'
[2025-06-04 06:50:01] 2025-06-04 10:49:47,163 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:50:01] 2025-06-04 10:49:47,975 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 06:50:01] 2025-06-04 10:49:47,975 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286455/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:50:01] 2025-06-04 10:49:47,976 | INFO     | extracted standard info from prmon json
[2025-06-04 06:50:01] 2025-06-04 10:49:47,976 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:50:01] 2025-06-04 10:49:47,976 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:50:01] 2025-06-04 10:49:47,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:50:01] 2025-06-04 10:49:47,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:50:01] 2025-06-04 10:49:47,978 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:50:01] 2025-06-04 10:49:47,979 | INFO     | sum of square deviations: 46143940.830188714
[2025-06-04 06:50:01] 2025-06-04 10:49:47,979 | INFO     | sum of deviations: 2088682260.962263
[2025-06-04 06:50:01] 2025-06-04 10:49:47,979 | INFO     | mean x: 1749032456.0566037
[2025-06-04 06:50:01] 2025-06-04 10:49:47,979 | INFO     | mean y: 2385568.679245283
[2025-06-04 06:50:01] 2025-06-04 10:49:47,979 | INFO     | -- intersect: -79166688400.45767
[2025-06-04 06:50:01] 2025-06-04 10:49:47,979 | INFO     | intersect: -79166688400.45767
[2025-06-04 06:50:01] 2025-06-04 10:49:47,979 | INFO     | chi2: 1.0055772407695842
[2025-06-04 06:50:01] 2025-06-04 10:49:47,979 | INFO     | -- intersect: -79166688400.45767
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | current memory leak: 45.26 B/s (using 53 data points, chi2=1.01)
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | ..............................
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | . Timing measurements:
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | . get job = 0 s
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | . initial setup = 2 s
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | . payload setup = 6 s
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | . stage-in = 0 s
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | . payload execution = 3615 s
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | . stage-out = 0 s
[2025-06-04 06:50:01] 2025-06-04 10:49:47,980 | INFO     | . log creation = 0 s
[2025-06-04 06:50:01] 2025-06-04 10:49:47,981 | INFO     | ..............................
[2025-06-04 06:50:01] 2025-06-04 10:49:48,340 | INFO     | 
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | job summary report
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | --------------------------------------------------
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | PanDA job id: 6678286455
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | task id: 45006595
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | errors: (none)
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | pilot state: finished 
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | transexitcode: 0
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | exeerrorcode: 0
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | exeerrordiag: 
[2025-06-04 06:50:01] 2025-06-04 10:49:48,341 | INFO     | exitcode: 0
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | exitmsg: OK
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | cpuconsumptiontime: 29813 s
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | nevents: 400
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | neventsw: 0
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | pid: 18117
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | pgrp: 18117
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | corecount: 12
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | event service: False
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | sizes: {0: 2405183, 4: 2405389, 11: 2405417, 3625: 2431095, 3626: 2440092, 3634: 2440234}
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | --------------------------------------------------
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | 
[2025-06-04 06:50:01] 2025-06-04 10:49:48,342 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 06:50:01] 2025-06-04 10:49:48,363 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,363 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,363 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,363 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,363 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,363 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:50:01] 2025-06-04 10:49:48,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,365 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:50:01] 2025-06-04 10:49:48,365 | INFO     | job 6678286455 has completed (purged errors)
[2025-06-04 06:50:01] 2025-06-04 10:49:48,365 | INFO     | overall cleanup function is called
[2025-06-04 06:50:01] 2025-06-04 10:49:49,373 | INFO     | --- collectZombieJob: --- 10, [18117]
[2025-06-04 06:50:01] 2025-06-04 10:49:49,373 | INFO     | zombie collector waiting for pid 18117
[2025-06-04 06:50:01] 2025-06-04 10:49:49,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:50:01] 2025-06-04 10:49:49,374 | INFO     | collected zombie processes
[2025-06-04 06:50:01] 2025-06-04 10:49:49,374 | INFO     | will attempt to kill all subprocesses of pid=18117
[2025-06-04 06:50:01] 2025-06-04 10:49:49,627 | INFO     | process IDs to be killed: [18117] (in reverse order)
[2025-06-04 06:50:01] 2025-06-04 10:49:49,719 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:50:01] 2025-06-04 10:49:49,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:50:01] 2025-06-04 10:49:49,729 | INFO     | did not find any defunct processes belonging to 18117
[2025-06-04 06:50:01] 2025-06-04 10:49:49,739 | INFO     | did not find any defunct processes belonging to 18117
[2025-06-04 06:50:01] 2025-06-04 10:49:49,740 | INFO     | ready for new job
[2025-06-04 06:50:01] 2025-06-04 10:49:49,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:50:01] 2025-06-04 10:49:49,741 | INFO     | **************************************
[2025-06-04 06:50:01] 2025-06-04 10:49:49,742 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:50:01] 2025-06-04 10:49:49,742 | INFO     | **************************************
[2025-06-04 06:50:01] 2025-06-04 10:49:49,742 | INFO     | 
[2025-06-04 06:50:01] 2025-06-04 10:49:49,757 | INFO     | architecture information:
[2025-06-04 06:50:01] 2025-06-04 10:49:49,757 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:50:01] 2025-06-04 10:49:49,770 | INFO     | cat /etc/os-release:
[2025-06-04 06:50:01] NAME="CentOS Linux"
[2025-06-04 06:50:01] VERSION="7 (Core)"
[2025-06-04 06:50:01] ID="centos"
[2025-06-04 06:50:01] ID_LIKE="rhel fedora"
[2025-06-04 06:50:01] VERSION_ID="7"
[2025-06-04 06:50:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:50:01] ANSI_COLOR="0;31"
[2025-06-04 06:50:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:50:01] HOME_URL="https://www.centos.org/"
[2025-06-04 06:50:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:50:01] 
[2025-06-04 06:50:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:50:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:50:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:50:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:50:01] 
[2025-06-04 06:50:01] 2025-06-04 10:49:49,770 | INFO     | **************************************
[2025-06-04 06:50:01] 2025-06-04 10:49:50,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 06:50:01] 2025-06-04 10:49:50,285 | INFO     | sufficient remaining disk space (56311676928 B)
[2025-06-04 06:50:01] 2025-06-04 10:49:50,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:50:01] 2025-06-04 10:49:50,285 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:50:01] 2025-06-04 10:49:50,285 | INFO     | update_server=False
[2025-06-04 06:50:01] 2025-06-04 10:49:50,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:50:01] 2025-06-04 10:49:50,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:50:01] 2025-06-04 10:49:50,286 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:50:01] 2025-06-04 10:49:50,287 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:50:01] 2025-06-04 10:49:50,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:50:01] 2025-06-04 10:49:50,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:50:01] 2025-06-04 10:49:50,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:50:01] 2025-06-04 10:49:50,622 | INFO     | all data control threads have been joined
[2025-06-04 06:50:01] 2025-06-04 10:49:50,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:50:01] 2025-06-04 10:49:50,672 | INFO     | aborting loop
[2025-06-04 06:50:01] 2025-06-04 10:49:50,922 | INFO     | all job control threads have been joined
[2025-06-04 06:50:01] 2025-06-04 10:49:51,177 | INFO     | all payload control threads have been joined
[2025-06-04 06:50:01] 2025-06-04 10:49:51,291 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:51,524 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:51,623 | INFO     | [data] control thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:51,676 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:51,861 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:51,927 | INFO     | [job] control thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:52,173 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:52,182 | INFO     | [payload] control thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:52,207 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:52,272 | INFO     | [job] validate thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:52,291 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:52,509 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:52,700 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:52,820 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:53,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:50:01] 2025-06-04 10:49:54,080 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:54,298 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:50:01] 2025-06-04 10:49:55,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213055252288)>', '<ExcThread(monitor, started 140212428601088)>']
[2025-06-04 06:50:01] 2025-06-04 10:49:56,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:50:01] 2025-06-04 10:49:56,317 | INFO     | [monitor] control thread has ended
[2025-06-04 06:50:01] 2025-06-04 10:50:00,884 | INFO     | all workflow threads have been joined
[2025-06-04 06:50:01] 2025-06-04 10:50:00,884 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:50:01] 2025-06-04 10:50:00,885 | INFO     | traces error code: 0
[2025-06-04 06:50:01] 2025-06-04 10:50:00,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:50:01] 2025-06-04 10:50:01,016 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:50:01] 2025-06-04 10:50:01,018 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:50:01] 2025-06-04 10:50:01,021 [wrapper] pilotpid: 9687
[2025-06-04 06:50:01] 2025-06-04 10:50:01,024 [wrapper] Pilot exit status: 0
[2025-06-04 06:50:01] 2025-06-04 10:50:01,034 [wrapper] pandaids: 6678286455
[2025-06-04 06:50:01] 2025-06-04 10:50:01,078 [wrapper] cleanup supervisor_pilot  195103 9688
[2025-06-04 06:50:01] 2025-06-04 10:50:01,080 [wrapper] Test setup, not cleaning
[2025-06-04 06:50:01] 2025-06-04 10:50:01,083 [wrapper] apfmon messages muted
[2025-06-04 06:50:01] 2025-06-04 10:50:01,086 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:50:01] 2025-06-04 10:50:01,088 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:50:01]  *** Error codes and diagnostics ***
[2025-06-04 06:50:01]     "exeErrorCode": 0,
[2025-06-04 06:50:01]     "exeErrorDiag": "",
[2025-06-04 06:50:01]     "pilotErrorCode": 0,
[2025-06-04 06:50:01]     "pilotErrorDiag": "",
[2025-06-04 06:50:01]  *** Listing of results directory ***
[2025-06-04 06:50:01] total 385680
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 23:13 queuedata.json
[2025-06-04 06:50:01] -rwx------. 1 boincer umatlas     37140 Jun  3 23:14 runpilot2-wrapper.sh
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas       100 Jun  4 05:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:50:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 05:48 run_atlas
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas       105 Jun  4 05:48 job.xml
[2025-06-04 06:50:01] -rw-r--r--. 2 boincer umatlas 213917692 Jun  4 05:48 EVNT.45006593._002059.pool.root.1
[2025-06-04 06:50:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:48 start_atlas.sh
[2025-06-04 06:50:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 05:48 shared
[2025-06-04 06:50:01] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 05:48 input.tar.gz
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas         0 Jun  4 05:48 boinc_lockfile
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 05:48 pandaJob.out
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas    986766 Jun  4 05:48 agis_schedconf.cvmfs.json
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas   1603667 Jun  4 05:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:50:01] drwx------. 4 boincer umatlas      4096 Jun  4 05:48 pilot3
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 06:48 init_data.xml
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas        95 Jun  4 06:48 pilot_heartbeat.json
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas 175758352 Jun  4 06:49 HITS.45006595._051383.pool.root.1
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas       529 Jun  4 06:49 boinc_task_state.xml
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas      1040 Jun  4 06:49 memory_monitor_summary.json
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas    343744 Jun  4 06:49 log.45006595._051383.job.log.tgz.1
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas      7717 Jun  4 06:49 heartbeat.json
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas        27 Jun  4 06:49 wrapper_checkpoint.txt
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 06:49 boinc_mmap_file
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas      4476 Jun  4 06:50 pilotlog.txt
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas    371036 Jun  4 06:50 log.45006595._051383.job.log.1
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas       357 Jun  4 06:50 output.list
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas       620 Jun  4 06:50 runtime_log
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas    737280 Jun  4 06:50 result.tar.gz
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas       653 Jun  4 06:50 XcxMDmTltg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmi2mKDmflij3m.diag
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 06:50 runtime_log.err
[2025-06-04 06:50:01] -rw-r--r--. 1 boincer umatlas     21756 Jun  4 06:50 stderr.txt
[2025-06-04 06:50:01] HITS file was successfully produced:
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas 175758352 Jun  4 06:49 shared/HITS.pool.root.1
[2025-06-04 06:50:01]  *** Contents of shared directory: ***
[2025-06-04 06:50:01] total 381784
[2025-06-04 06:50:01] -rw-r--r--. 2 boincer umatlas 213917692 Jun  4 05:48 ATLAS.root_0
[2025-06-04 06:50:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:48 start_atlas.sh
[2025-06-04 06:50:01] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 05:48 input.tar.gz
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas 175758352 Jun  4 06:49 HITS.pool.root.1
[2025-06-04 06:50:01] -rw-------. 1 boincer umatlas    737280 Jun  4 06:50 result.tar.gz
06:50:02 (5712): run_atlas exited; CPU time 29861.530782
06:50:02 (5712): called boinc_finish(0)

</stderr_txt>
]]>

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