Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:14:15 (53653): wrapper (7.7.26015): starting
04:14:15 (53653): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:14:15] Arguments: --nthreads 8
[2025-06-04 04:14:15] Threads: 8
[2025-06-04 04:14:15] Checking for CVMFS
[2025-06-04 04:14:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:14:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:14:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:14:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:14:15] 2.11.2.0 74184 12440 364620 146772 2 676 17970599 18432000 12562 130560 0 72813462 99.608 56604433 42672 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 04:14:15] CVMFS is ok
[2025-06-04 04:14:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:14:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:14:15] Further information can be found at the LHC@home message board.
[2025-06-04 04:14:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:14:15] Checking for apptainer binary...
[2025-06-04 04:14:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:14:15] Running /usr/bin/apptainer --version
[2025-06-04 04:14:16] apptainer version 1.3.2-1.el7
[2025-06-04 04:14:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:14:16] c-212-13.aglt2.org
[2025-06-04 04:14:16] apptainer works
[2025-06-04 04:14:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:14:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:14:16] Starting ATLAS job with PandaID=6678154423
[2025-06-04 04:14:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:18:10]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:18:10]  protocol_id=None
[2025-06-04 05:18:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:18:10]  replicas=None
[2025-06-04 05:18:10]  scope=mc23_13p6TeV
[2025-06-04 05:18:10]  status=None
[2025-06-04 05:18:10]  status_code=0
[2025-06-04 05:18:10]  storage_token=
[2025-06-04 05:18:10]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6678154423/log.45006595._047743.job.log.tgz.1
[2025-06-04 05:18:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/e6/log.45006595._047743.job.log.tgz.1
[2025-06-04 05:18:10]  workdir=None
[2025-06-04 05:18:10] ]
[2025-06-04 05:18:10] 2025-06-04 09:17:42,066 | INFO     | transferring file log.45006595._047743.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6678154423/log.45006595._047743.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:18:10] 2025-06-04 09:17:42,066 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6678154423/log.45006595._047743.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._047743.job
[2025-06-04 05:18:10] 2025-06-04 09:17:42,141 | INFO     | adding to output.list: log.45006595._047743.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/e6/log.45006595._047743.job.log.tg
[2025-06-04 05:18:10] 2025-06-04 09:17:42,141 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:18:10] 2025-06-04 09:17:42,141 | INFO     | summary of transferred files:
[2025-06-04 05:18:10] 2025-06-04 09:17:42,142 | INFO     |  -- lfn=log.45006595._047743.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:18:10] 2025-06-04 09:17:42,142 | INFO     | stage-out finished correctly
[2025-06-04 05:18:10] 2025-06-04 09:17:42,455 | INFO     | monitor loop #285: job 0:6678154423 is in state 'finished'
[2025-06-04 05:18:10] 2025-06-04 09:17:42,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:18:10] 2025-06-04 09:17:44,959 | INFO     | monitor loop #286: job 0:6678154423 is in state 'finished'
[2025-06-04 05:18:10] 2025-06-04 09:17:44,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:18:10] 2025-06-04 09:17:44,986 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:18:10] 2025-06-04 09:17:46,928 | INFO     | job 6678154423 has state=finished
[2025-06-04 05:18:10] 2025-06-04 09:17:46,928 | INFO     | preparing for final server update for job 6678154423 in state='finished'
[2025-06-04 05:18:10] 2025-06-04 09:17:46,929 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:18:10] 2025-06-04 09:17:46,929 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:18:10] 2025-06-04 09:17:46,929 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:18:10] 2025-06-04 09:17:46,929 | INFO     | job 6678154423 has finished - writing final server update
[2025-06-04 05:18:10] 2025-06-04 09:17:46,930 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:18:10] 2025-06-04 09:17:46,934 | INFO     | executing command: lscpu
[2025-06-04 05:18:10] 2025-06-04 09:17:46,978 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:18:10] 2025-06-04 09:17:47,462 | INFO     | monitor loop #287: job 0:6678154423 is in state 'finished'
[2025-06-04 05:18:10] 2025-06-04 09:17:47,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:18:10] 2025-06-04 09:17:49,965 | INFO     | monitor loop #288: job 0:6678154423 is in state 'finished'
[2025-06-04 05:18:10] 2025-06-04 09:17:49,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:18:10] 2025-06-04 09:17:52,468 | INFO     | monitor loop #289: job 0:6678154423 is in state 'finished'
[2025-06-04 05:18:10] 2025-06-04 09:17:52,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:18:10] 2025-06-04 09:17:54,356 | INFO     | PID=57293 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:18:10] 2025-06-04 09:17:54,356 | INFO     | .. there are 18 such processes running
[2025-06-04 05:18:10] 2025-06-04 09:17:54,908 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:18:10] 2025-06-04 09:17:54,909 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6678154423/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:18:10] 2025-06-04 09:17:54,910 | INFO     | extracted standard info from prmon json
[2025-06-04 05:18:10] 2025-06-04 09:17:54,910 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:18:10] 2025-06-04 09:17:54,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:18:10] 2025-06-04 09:17:54,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:18:10] 2025-06-04 09:17:54,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:18:10] 2025-06-04 09:17:54,911 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:18:10] 2025-06-04 09:17:54,912 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 05:18:10] 2025-06-04 09:17:54,912 | INFO     | sum of deviations: -464916258.0
[2025-06-04 05:18:10] 2025-06-04 09:17:54,912 | INFO     | mean x: 1749026853.0
[2025-06-04 05:18:10] 2025-06-04 09:17:54,912 | INFO     | mean y: 2495035.690909091
[2025-06-04 05:18:10] 2025-06-04 09:17:54,912 | INFO     | -- intersect: 15769467552.704174
[2025-06-04 05:18:10] 2025-06-04 09:17:54,912 | INFO     | intersect: 15769467552.704174
[2025-06-04 05:18:10] 2025-06-04 09:17:54,913 | INFO     | chi2: 0.0007365296200547942
[2025-06-04 05:18:10] 2025-06-04 09:17:54,913 | INFO     | -- intersect: 15769467552.704174
[2025-06-04 05:18:10] 2025-06-04 09:17:54,913 | INFO     | current memory leak: -9.01 B/s (using 55 data points, chi2=0.00)
[2025-06-04 05:18:10] 2025-06-04 09:17:54,913 | INFO     | ..............................
[2025-06-04 05:18:10] 2025-06-04 09:17:54,913 | INFO     | . Timing measurements:
[2025-06-04 05:18:10] 2025-06-04 09:17:54,913 | INFO     | . get job = 0 s
[2025-06-04 05:18:10] 2025-06-04 09:17:54,913 | INFO     | . initial setup = 2 s
[2025-06-04 05:18:10] 2025-06-04 09:17:54,913 | INFO     | . payload setup = 7 s
[2025-06-04 05:18:10] 2025-06-04 09:17:54,913 | INFO     | . stage-in = 0 s
[2025-06-04 05:18:10] 2025-06-04 09:17:54,914 | INFO     | . payload execution = 3764 s
[2025-06-04 05:18:10] 2025-06-04 09:17:54,914 | INFO     | . stage-out = 0 s
[2025-06-04 05:18:10] 2025-06-04 09:17:54,914 | INFO     | . log creation = 0 s
[2025-06-04 05:18:10] 2025-06-04 09:17:54,914 | INFO     | ..............................
[2025-06-04 05:18:10] 2025-06-04 09:17:54,991 | INFO     | 
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | job summary report
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | --------------------------------------------------
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | PanDA job id: 6678154423
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | task id: 45006595
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | errors: (none)
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | pilot state: finished 
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | transexitcode: 0
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | exeerrorcode: 0
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | exeerrordiag: 
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | exitcode: 0
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | exitmsg: OK
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | cpuconsumptiontime: 27421 s
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | nevents: 400
[2025-06-04 05:18:10] 2025-06-04 09:17:54,992 | INFO     | neventsw: 0
[2025-06-04 05:18:10] 2025-06-04 09:17:54,993 | INFO     | pid: 65935
[2025-06-04 05:18:10] 2025-06-04 09:17:54,993 | INFO     | pgrp: 65935
[2025-06-04 05:18:10] 2025-06-04 09:17:54,993 | INFO     | corecount: 8
[2025-06-04 05:18:10] 2025-06-04 09:17:54,993 | INFO     | event service: False
[2025-06-04 05:18:10] 2025-06-04 09:17:54,993 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 3776: 2431015, 3777: 2439956, 3780: 2440012, 3790: 2440310}
[2025-06-04 05:18:10] 2025-06-04 09:17:54,993 | INFO     | --------------------------------------------------
[2025-06-04 05:18:10] 2025-06-04 09:17:54,993 | INFO     | 
[2025-06-04 05:18:10] 2025-06-04 09:17:54,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-04 05:18:10] 2025-06-04 09:17:55,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,028 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,028 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:18:10] 2025-06-04 09:17:55,029 | INFO     | job 6678154423 has completed (purged errors)
[2025-06-04 05:18:10] 2025-06-04 09:17:55,030 | INFO     | overall cleanup function is called
[2025-06-04 05:18:10] 2025-06-04 09:17:56,036 | INFO     | --- collectZombieJob: --- 10, [65935]
[2025-06-04 05:18:10] 2025-06-04 09:17:56,036 | INFO     | zombie collector waiting for pid 65935
[2025-06-04 05:18:10] 2025-06-04 09:17:56,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:18:10] 2025-06-04 09:17:56,036 | INFO     | collected zombie processes
[2025-06-04 05:18:10] 2025-06-04 09:17:56,037 | INFO     | will attempt to kill all subprocesses of pid=65935
[2025-06-04 05:18:10] 2025-06-04 09:17:56,283 | INFO     | process IDs to be killed: [65935] (in reverse order)
[2025-06-04 05:18:10] 2025-06-04 09:17:56,374 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:18:10] 2025-06-04 09:17:56,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:18:10] 2025-06-04 09:17:56,384 | INFO     | did not find any defunct processes belonging to 65935
[2025-06-04 05:18:10] 2025-06-04 09:17:56,391 | INFO     | did not find any defunct processes belonging to 65935
[2025-06-04 05:18:10] 2025-06-04 09:17:56,391 | INFO     | ready for new job
[2025-06-04 05:18:10] 2025-06-04 09:17:56,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:18:10] 2025-06-04 09:17:56,392 | INFO     | **************************************
[2025-06-04 05:18:10] 2025-06-04 09:17:56,392 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:18:10] 2025-06-04 09:17:56,392 | INFO     | **************************************
[2025-06-04 05:18:10] 2025-06-04 09:17:56,392 | INFO     | 
[2025-06-04 05:18:10] 2025-06-04 09:17:56,395 | INFO     | architecture information:
[2025-06-04 05:18:10] 2025-06-04 09:17:56,395 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:18:10] 2025-06-04 09:17:56,410 | INFO     | cat /etc/os-release:
[2025-06-04 05:18:10] NAME="CentOS Linux"
[2025-06-04 05:18:10] VERSION="7 (Core)"
[2025-06-04 05:18:10] ID="centos"
[2025-06-04 05:18:10] ID_LIKE="rhel fedora"
[2025-06-04 05:18:10] VERSION_ID="7"
[2025-06-04 05:18:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:18:10] ANSI_COLOR="0;31"
[2025-06-04 05:18:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:18:10] HOME_URL="https://www.centos.org/"
[2025-06-04 05:18:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:18:10] 
[2025-06-04 05:18:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:18:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:18:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:18:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:18:10] 
[2025-06-04 05:18:10] 2025-06-04 09:17:56,411 | INFO     | **************************************
[2025-06-04 05:18:10] 2025-06-04 09:17:56,913 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-04 05:18:10] 2025-06-04 09:17:56,974 | INFO     | sufficient remaining disk space (104047050752 B)
[2025-06-04 05:18:10] 2025-06-04 09:17:56,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:18:10] 2025-06-04 09:17:56,974 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:18:10] 2025-06-04 09:17:56,974 | INFO     | update_server=False
[2025-06-04 05:18:10] 2025-06-04 09:17:56,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:18:10] 2025-06-04 09:17:56,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:18:10] 2025-06-04 09:17:56,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:18:10] 2025-06-04 09:17:56,975 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:18:10] 2025-06-04 09:17:56,975 | INFO     | aborting loop
[2025-06-04 05:18:10] 2025-06-04 09:17:56,975 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:18:10] 2025-06-04 09:17:56,975 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:18:10] 2025-06-04 09:17:56,975 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:18:10] 2025-06-04 09:17:57,439 | INFO     | all data control threads have been joined
[2025-06-04 05:18:10] 2025-06-04 09:17:57,610 | INFO     | all payload control threads have been joined
[2025-06-04 05:18:10] 2025-06-04 09:17:57,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:18:10] 2025-06-04 09:17:57,980 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:57,981 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:57,981 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:58,066 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:58,320 | INFO     | all job control threads have been joined
[2025-06-04 05:18:10] 2025-06-04 09:17:58,445 | INFO     | [data] control thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:58,449 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:58,535 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:58,616 | INFO     | [payload] control thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:58,656 | INFO     | [job] validate thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:58,974 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:59,130 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:59,206 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:59,326 | INFO     | [job] control thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:59,345 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:17:59,725 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:18:00,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:18:10] 2025-06-04 09:18:04,074 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:18:10] 2025-06-04 09:18:05,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139955474696000)>', '<ExcThread(monitor, started 139954420164352)>']
[2025-06-04 05:18:10] 2025-06-04 09:18:06,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:18:10] 2025-06-04 09:18:06,021 | INFO     | [monitor] control thread has ended
[2025-06-04 05:18:10] 2025-06-04 09:18:10,311 | INFO     | all workflow threads have been joined
[2025-06-04 05:18:10] 2025-06-04 09:18:10,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:18:10] 2025-06-04 09:18:10,311 | INFO     | traces error code: 0
[2025-06-04 05:18:10] 2025-06-04 09:18:10,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:18:10] 2025-06-04 09:18:10,453 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:18:10] 2025-06-04 09:18:10,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:18:10] 2025-06-04 09:18:10,457 [wrapper] pilotpid: 57293
[2025-06-04 05:18:10] 2025-06-04 09:18:10,458 [wrapper] Pilot exit status: 0
[2025-06-04 05:18:10] 2025-06-04 09:18:10,464 [wrapper] pandaids: 6678154423
[2025-06-04 05:18:10] 2025-06-04 09:18:10,523 [wrapper] cleanup supervisor_pilot 81267 57294
[2025-06-04 05:18:10] 2025-06-04 09:18:10,525 [wrapper] Test setup, not cleaning
[2025-06-04 05:18:10] 2025-06-04 09:18:10,527 [wrapper] apfmon messages muted
[2025-06-04 05:18:10] 2025-06-04 09:18:10,529 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:18:10] 2025-06-04 09:18:10,530 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:18:10]  *** Error codes and diagnostics ***
[2025-06-04 05:18:10]     "exeErrorCode": 0,
[2025-06-04 05:18:10]     "exeErrorDiag": "",
[2025-06-04 05:18:10]     "pilotErrorCode": 0,
[2025-06-04 05:18:10]     "pilotErrorDiag": "",
[2025-06-04 05:18:10]  *** Listing of results directory ***
[2025-06-04 05:18:10] total 392032
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 18:55 queuedata.json
[2025-06-04 05:18:10] -rwx------ 1 boincer umatlas     37140 Jun  3 18:55 runpilot2-wrapper.sh
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas       100 Jun  4 04:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:18:10] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 04:14 run_atlas
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas       105 Jun  4 04:14 job.xml
[2025-06-04 05:18:10] -rw-r--r-- 2 boincer umatlas 217963989 Jun  4 04:14 EVNT.45006593._001917.pool.root.1
[2025-06-04 05:18:10] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:14 start_atlas.sh
[2025-06-04 05:18:10] drwxrwx--x 2 boincer umatlas      4096 Jun  4 04:14 shared
[2025-06-04 05:18:10] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 04:14 input.tar.gz
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas         0 Jun  4 04:14 boinc_lockfile
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 04:14 pandaJob.out
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas    986745 Jun  4 04:14 agis_schedconf.cvmfs.json
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas   1603667 Jun  4 04:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:18:10] drwx------ 4 boincer umatlas      4096 Jun  4 04:14 pilot3
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas      6387 Jun  4 05:10 init_data.xml
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas 178289700 Jun  4 05:17 HITS.45006595._047743.pool.root.1
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas       529 Jun  4 05:17 boinc_task_state.xml
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas        95 Jun  4 05:17 pilot_heartbeat.json
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas      1043 Jun  4 05:17 memory_monitor_summary.json
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas    292413 Jun  4 05:17 log.45006595._047743.job.log.tgz.1
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas      7711 Jun  4 05:17 heartbeat.json
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:18 boinc_mmap_file
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:18 wrapper_checkpoint.txt
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas      4477 Jun  4 05:18 pilotlog.txt
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas    384970 Jun  4 05:18 log.45006595._047743.job.log.1
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas       357 Jun  4 05:18 output.list
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:18 runtime_log
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas    696320 Jun  4 05:18 result.tar.gz
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 05:18 runtime_log.err
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas       658 Jun  4 05:18 55FNDmCjpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpTmKDmpYEJyn.diag
[2025-06-04 05:18:10] -rw-r--r-- 1 boincer umatlas     21828 Jun  4 05:18 stderr.txt
[2025-06-04 05:18:10] HITS file was successfully produced:
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas 178289700 Jun  4 05:17 shared/HITS.pool.root.1
[2025-06-04 05:18:10]  *** Contents of shared directory: ***
[2025-06-04 05:18:10] total 388172
[2025-06-04 05:18:10] -rw-r--r-- 2 boincer umatlas 217963989 Jun  4 04:14 ATLAS.root_0
[2025-06-04 05:18:10] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:14 start_atlas.sh
[2025-06-04 05:18:10] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 04:14 input.tar.gz
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas 178289700 Jun  4 05:17 HITS.pool.root.1
[2025-06-04 05:18:10] -rw------- 1 boincer umatlas    696320 Jun  4 05:18 result.tar.gz
05:18:12 (53653): run_atlas exited; CPU time 27327.508767
05:18:12 (53653): called boinc_finish(0)

</stderr_txt>
]]>

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