Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:39:47 (32473): wrapper (7.7.26015): starting
18:39:47 (32473): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:39:47] Arguments: --nthreads 8
[2025-06-04 18:39:47] Threads: 8
[2025-06-04 18:39:47] Checking for CVMFS
[2025-06-04 18:39:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:39:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:39:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:39:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:39:50] 2.11.2.0 27084 33447 90776 146788 2 159 15129539 25165824 3245 130560 0 17059454 99.805 19668889 2069 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:39:50] CVMFS is ok
[2025-06-04 18:39:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:39:50] Checking for apptainer binary...
[2025-06-04 18:39:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:39:50] Running /usr/bin/apptainer --version
[2025-06-04 18:39:50] apptainer version 1.3.2-1.el7
[2025-06-04 18:39:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:39:52] cg-vwn405.simple-grid.lan
[2025-06-04 18:39:52] apptainer works
[2025-06-04 18:39:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:39:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:39:52] Starting ATLAS job with PandaID=6678286460
[2025-06-04 18:39:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:09:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:09:18] 2025-06-04 20:18:46,089 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:09:18] 2025-06-04 20:18:46,089 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:09:18] 2025-06-04 20:18:46,089 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:09:18] 2025-06-04 20:18:46,089 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:09:18] 2025-06-04 20:18:46,094 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:09:18] 2025-06-04 20:18:46,095 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,097 | INFO     | sum of deviations: -9401130228.999996
[2025-06-04 23:09:18] 2025-06-04 20:18:46,097 | INFO     | mean x: 1749061750.0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,097 | INFO     | mean y: 2483223.028169014
[2025-06-04 23:09:18] 2025-06-04 20:18:46,097 | INFO     | -- intersect: 5490021334.184009
[2025-06-04 23:09:18] 2025-06-04 20:18:46,097 | INFO     | intersect: 5490021334.184009
[2025-06-04 23:09:18] 2025-06-04 20:18:46,098 | INFO     | chi2: 2.6127246874149037
[2025-06-04 23:09:18] 2025-06-04 20:18:46,098 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,100 | INFO     | sum of deviations: 4702969459.999997
[2025-06-04 23:09:18] 2025-06-04 20:18:46,100 | INFO     | mean x: 1749061597.5
[2025-06-04 23:09:18] 2025-06-04 20:18:46,100 | INFO     | mean y: 2493461.894230769
[2025-06-04 23:09:18] 2025-06-04 20:18:46,100 | INFO     | -- intersect: -2945448116.565882
[2025-06-04 23:09:18] 2025-06-04 20:18:46,100 | INFO     | intersect: -2945448116.565882
[2025-06-04 23:09:18] 2025-06-04 20:18:46,100 | INFO     | chi2: 1.853319502764528
[2025-06-04 23:09:18] 2025-06-04 20:18:46,101 | INFO     | current chi2=1.853319502764528 (change=29.065641255977514 %)
[2025-06-04 23:09:18] 2025-06-04 20:18:46,101 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,103 | INFO     | sum of deviations: 4606331613.0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,103 | INFO     | mean x: 1749061445.0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,103 | INFO     | mean y: 2493386.891625616
[2025-06-04 23:09:18] 2025-06-04 20:18:46,103 | INFO     | -- intersect: -3103526755.518554
[2025-06-04 23:09:18] 2025-06-04 20:18:46,103 | INFO     | intersect: -3103526755.518554
[2025-06-04 23:09:18] 2025-06-04 20:18:46,104 | INFO     | chi2: 1.8537970634632528
[2025-06-04 23:09:18] 2025-06-04 20:18:46,104 | INFO     | current chi2=1.8537970634632528 (change=-0.0257678558938426 %)
[2025-06-04 23:09:18] 2025-06-04 20:18:46,104 | INFO     | right removable region: 202
[2025-06-04 23:09:18] 2025-06-04 20:18:46,104 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,106 | INFO     | sum of deviations: -46249502190.5
[2025-06-04 23:09:18] 2025-06-04 20:18:46,106 | INFO     | mean x: 1749061902.5
[2025-06-04 23:09:18] 2025-06-04 20:18:46,106 | INFO     | mean y: 2510244.658653846
[2025-06-04 23:09:18] 2025-06-04 20:18:46,106 | INFO     | -- intersect: 28992886521.83418
[2025-06-04 23:09:18] 2025-06-04 20:18:46,107 | INFO     | intersect: 28992886521.83418
[2025-06-04 23:09:18] 2025-06-04 20:18:46,107 | INFO     | chi2: 0.9695765962656273
[2025-06-04 23:09:18] 2025-06-04 20:18:46,107 | INFO     | current chi2=0.9695765962656273 (change=62.89021185676662 %)
[2025-06-04 23:09:18] 2025-06-04 20:18:46,108 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,109 | INFO     | sum of deviations: -43846383674.99999
[2025-06-04 23:09:18] 2025-06-04 20:18:46,109 | INFO     | mean x: 1749062055.0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,109 | INFO     | mean y: 2508336.9655172415
[2025-06-04 23:09:18] 2025-06-04 20:18:46,109 | INFO     | -- intersect: 29567856602.09638
[2025-06-04 23:09:18] 2025-06-04 20:18:46,110 | INFO     | intersect: 29567856602.09638
[2025-06-04 23:09:18] 2025-06-04 20:18:46,110 | INFO     | chi2: 0.9552832240400021
[2025-06-04 23:09:18] 2025-06-04 20:18:46,110 | INFO     | current chi2=0.9552832240400021 (change=1.4741870091209759 %)
[2025-06-04 23:09:18] 2025-06-04 20:18:46,110 | INFO     | left removable region: 20
[2025-06-04 23:09:18] 2025-06-04 20:18:46,111 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 23:09:18] 2025-06-04 20:18:46,112 | INFO     | sum of deviations: -15888847601.499998
[2025-06-04 23:09:18] 2025-06-04 20:18:46,112 | INFO     | mean x: 1749062024.5
[2025-06-04 23:09:18] 2025-06-04 20:18:46,112 | INFO     | mean y: 2508347.7527472526
[2025-06-04 23:09:18] 2025-06-04 20:18:46,113 | INFO     | -- intersect: 14869330067.168657
[2025-06-04 23:09:18] 2025-06-04 20:18:46,113 | INFO     | intersect: 14869330067.168657
[2025-06-04 23:09:18] 2025-06-04 20:18:46,113 | INFO     | chi2: 0.12777573599011904
[2025-06-04 23:09:18] 2025-06-04 20:18:46,113 | INFO     | -- intersect: 14869330067.168657
[2025-06-04 23:09:18] 2025-06-04 20:18:46,113 | INFO     | current memory leak: -8.50 B/s (using 182 data points, chi2=0.13)
[2025-06-04 23:09:18] 2025-06-04 20:18:46,114 | INFO     | ..............................
[2025-06-04 23:09:18] 2025-06-04 20:18:46,114 | INFO     | . Timing measurements:
[2025-06-04 23:09:18] 2025-06-04 20:18:46,115 | INFO     | . get job = 0 s
[2025-06-04 23:09:18] 2025-06-04 20:18:46,115 | INFO     | . initial setup = 2 s
[2025-06-04 23:09:18] 2025-06-04 20:18:46,115 | INFO     | . payload setup = 13 s
[2025-06-04 23:09:18] 2025-06-04 20:18:46,115 | INFO     | . stage-in = 0 s
[2025-06-04 23:09:18] 2025-06-04 20:18:46,115 | INFO     | . payload execution = 12972 s
[2025-06-04 23:09:18] 2025-06-04 20:18:46,115 | INFO     | . stage-out = 4 s
[2025-06-04 23:09:18] 2025-06-04 20:18:46,115 | INFO     | . log creation = 1 s
[2025-06-04 23:09:18] 2025-06-04 20:18:46,115 | INFO     | ..............................
[2025-06-04 23:09:18] 2025-06-04 20:18:46,250 | INFO     | 
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | job summary report
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | --------------------------------------------------
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | PanDA job id: 6678286460
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | task id: 45006595
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | errors: (none)
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | pilot state: finished 
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | transexitcode: 0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | exeerrorcode: 0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,251 | INFO     | exeerrordiag: 
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | exitcode: 0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | exitmsg: OK
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | cpuconsumptiontime: 49025 s
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | nevents: 400
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | neventsw: 0
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | pid: 12341
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | pgrp: 12341
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | corecount: 8
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | event service: False
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | sizes: {0: 2396514, 1: 2397199, 2: 2397398, 13: 2397398, 14: 2397660, 23: 2397688, 12990: 2427059, 12995: 2436000, 12997: 2436056, 13080: 2436226}
[2025-06-04 23:09:18] 2025-06-04 20:18:46,252 | INFO     | --------------------------------------------------
[2025-06-04 23:09:18] 2025-06-04 20:18:46,253 | INFO     | 
[2025-06-04 23:09:18] 2025-06-04 20:18:46,253 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 23:09:18] 2025-06-04 20:18:46,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,761 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,761 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,761 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,761 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:09:18] 2025-06-04 20:18:46,763 | INFO     | job 6678286460 has completed (purged errors)
[2025-06-04 23:09:18] 2025-06-04 20:18:46,763 | INFO     | overall cleanup function is called
[2025-06-04 23:09:18] 2025-06-04 20:18:47,772 | INFO     | --- collectZombieJob: --- 10, [12341]
[2025-06-04 23:09:18] 2025-06-04 20:18:47,773 | INFO     | zombie collector waiting for pid 12341
[2025-06-04 23:09:18] 2025-06-04 20:18:47,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:09:18] 2025-06-04 20:18:47,773 | INFO     | collected zombie processes
[2025-06-04 23:09:18] 2025-06-04 20:18:47,773 | INFO     | will attempt to kill all subprocesses of pid=12341
[2025-06-04 23:09:18] 2025-06-04 20:18:47,881 | INFO     | process IDs to be killed: [12341] (in reverse order)
[2025-06-04 23:09:18] 2025-06-04 20:18:48,367 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:09:18] 2025-06-04 20:18:48,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:09:18] 2025-06-04 20:18:48,371 | INFO     | did not find any defunct processes belonging to 12341
[2025-06-04 23:09:18] 2025-06-04 20:18:48,374 | INFO     | did not find any defunct processes belonging to 12341
[2025-06-04 23:09:18] 2025-06-04 20:18:48,374 | INFO     | ready for new job
[2025-06-04 23:09:18] 2025-06-04 20:18:48,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:09:18] 2025-06-04 20:18:48,377 | INFO     | **************************************
[2025-06-04 23:09:18] 2025-06-04 20:18:48,377 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:09:18] 2025-06-04 20:18:48,377 | INFO     | **************************************
[2025-06-04 23:09:18] 2025-06-04 20:18:48,377 | INFO     | 
[2025-06-04 23:09:18] 2025-06-04 20:18:48,378 | INFO     | pilot is running in a VM
[2025-06-04 23:09:18] 2025-06-04 20:18:48,378 | INFO     | architecture information:
[2025-06-04 23:09:18] 2025-06-04 20:18:48,379 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:09:18] 2025-06-04 20:18:48,553 | INFO     | cat /etc/os-release:
[2025-06-04 23:09:18] NAME="CentOS Linux"
[2025-06-04 23:09:18] VERSION="7 (Core)"
[2025-06-04 23:09:18] ID="centos"
[2025-06-04 23:09:18] ID_LIKE="rhel fedora"
[2025-06-04 23:09:18] VERSION_ID="7"
[2025-06-04 23:09:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:09:18] ANSI_COLOR="0;31"
[2025-06-04 23:09:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:09:18] HOME_URL="https://www.centos.org/"
[2025-06-04 23:09:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:09:18] 
[2025-06-04 23:09:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:09:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:09:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:09:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:09:18] 
[2025-06-04 23:09:18] 2025-06-04 20:18:48,554 | INFO     | **************************************
[2025-06-04 23:09:18] 2025-06-04 20:18:49,058 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 23:09:18] 2025-06-04 20:18:49,219 | INFO     | sufficient remaining disk space (497032364032 B)
[2025-06-04 23:09:18] 2025-06-04 20:18:49,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:09:18] 2025-06-04 20:18:49,219 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:09:18] 2025-06-04 20:18:49,219 | INFO     | update_server=False
[2025-06-04 23:09:18] 2025-06-04 20:18:49,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:09:18] 2025-06-04 20:18:49,222 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:09:18] 2025-06-04 20:18:49,223 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:09:18] 2025-06-04 20:18:49,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:09:18] 2025-06-04 20:18:49,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:09:18] 2025-06-04 20:18:49,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:09:18] 2025-06-04 20:18:49,230 | INFO     | aborting loop
[2025-06-04 23:09:18] 2025-06-04 20:18:49,429 | INFO     | all payload control threads have been joined
[2025-06-04 23:09:18] 2025-06-04 20:18:49,435 | INFO     | all data control threads have been joined
[2025-06-04 23:09:18] 2025-06-04 20:18:49,922 | INFO     | all job control threads have been joined
[2025-06-04 23:09:18] 2025-06-04 20:18:49,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:09:18] 2025-06-04 20:18:50,226 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:50,236 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:50,433 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:50,438 | INFO     | [payload] control thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:50,442 | INFO     | [data] control thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:50,534 | INFO     | [job] validate thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:50,928 | INFO     | [job] control thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:51,237 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:51,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:09:18] 2025-06-04 20:18:51,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:09:18] 2025-06-04 20:18:51,558 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:51,597 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:51,666 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:51,687 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:51,985 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:52,274 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:55,443 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:18:59,340 | INFO     | job.realtimelogging is not enabled
[2025-06-04 23:09:18] 2025-06-04 20:19:00,346 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:09:18] 2025-06-04 20:19:02,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140178497779520)>', '<ExcThread(monitor, started 140177926252288)>']
[2025-06-04 23:09:18] 2025-06-04 20:19:02,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:09:18] 2025-06-04 20:19:02,303 | INFO     | [monitor] control thread has ended
[2025-06-04 23:09:18] 2025-06-04 20:19:07,138 | INFO     | all workflow threads have been joined
[2025-06-04 23:09:18] 2025-06-04 20:19:07,139 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:09:18] 2025-06-04 20:19:07,139 | INFO     | traces error code: 0
[2025-06-04 23:09:18] 2025-06-04 20:19:07,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:09:18] 2025-06-04 20:19:07,462 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:09:18] 2025-06-04 20:19:07,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:09:18] 2025-06-04 20:19:07,615 [wrapper] pilotpid: 4034
[2025-06-04 23:09:18] 2025-06-04 20:19:07,689 [wrapper] Pilot exit status: 0
[2025-06-04 23:09:18] 2025-06-04 20:19:08,068 [wrapper] pandaids: 6678286460
[2025-06-04 23:09:18] 2025-06-04 20:19:09,109 [wrapper] cleanup supervisor_pilot   887 4035
[2025-06-04 23:09:18] 2025-06-04 20:19:09,145 [wrapper] Test setup, not cleaning
[2025-06-04 23:09:18] 2025-06-04 20:19:09,187 [wrapper] apfmon messages muted
[2025-06-04 23:09:18] 2025-06-04 20:19:09,227 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:09:18] 2025-06-04 20:19:09,301 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:09:18]  *** Error codes and diagnostics ***
[2025-06-04 23:09:18]     "exeErrorCode": 0,
[2025-06-04 23:09:18]     "exeErrorDiag": "",
[2025-06-04 23:09:18]     "pilotErrorCode": 0,
[2025-06-04 23:09:18]     "pilotErrorDiag": "",
[2025-06-04 23:09:18]  *** Listing of results directory ***
[2025-06-04 23:09:18] total 387840
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:13 queuedata.json
[2025-06-04 23:09:18] -rwx------. 1 boinc boinc     37140 Jun  4 05:13 runpilot2-wrapper.sh
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:09:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:39 run_atlas
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:39 job.xml
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc      6392 Jun  4 18:39 init_data.xml
[2025-06-04 23:09:18] -rw-r--r--. 2 boinc boinc 213917692 Jun  4 18:39 EVNT.45006593._002059.pool.root.1
[2025-06-04 23:09:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:39 start_atlas.sh
[2025-06-04 23:09:18] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:39 shared
[2025-06-04 23:09:18] -rw-r--r--. 2 boinc boinc    508882 Jun  4 18:39 input.tar.gz
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:39 boinc_lockfile
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc      2525 Jun  4 18:39 pandaJob.out
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc    990984 Jun  4 18:40 agis_schedconf.cvmfs.json
[2025-06-04 23:09:18] drwx------. 4 boinc boinc      4096 Jun  4 18:40 pilot3
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc 176399695 Jun  4 22:16 HITS.45006595._051388.pool.root.1
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc       531 Jun  4 22:16 boinc_task_state.xml
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc      1015 Jun  4 22:17 memory_monitor_summary.json
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc   1598969 Jun  4 22:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc    372736 Jun  4 22:17 log.45006595._051388.job.log.tgz.1
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc        95 Jun  4 22:18 pilot_heartbeat.json
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc      7688 Jun  4 22:18 heartbeat.json
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc      4611 Jun  4 22:19 pilotlog.txt
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc   1133813 Jun  4 22:19 log.45006595._051388.job.log.1
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc       357 Jun  4 22:19 output.list
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:19 runtime_log
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc   1525760 Jun  4 22:19 result.tar.gz
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc      8659 Jun  4 22:19 runtime_log.err
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc       657 Jun  4 22:19 MsMODmXktg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSbaKDmcSu7um.diag
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc      8192 Jun  4 23:09 boinc_mmap_file
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc        28 Jun  4 23:09 wrapper_checkpoint.txt
[2025-06-04 23:09:18] -rw-r--r--. 1 boinc boinc     20487 Jun  4 23:09 stderr.txt
[2025-06-04 23:09:18] HITS file was successfully produced:
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc 176399695 Jun  4 22:16 shared/HITS.pool.root.1
[2025-06-04 23:09:18]  *** Contents of shared directory: ***
[2025-06-04 23:09:18] total 383180
[2025-06-04 23:09:18] -rw-r--r--. 2 boinc boinc 213917692 Jun  4 18:39 ATLAS.root_0
[2025-06-04 23:09:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:39 start_atlas.sh
[2025-06-04 23:09:18] -rw-r--r--. 2 boinc boinc    508882 Jun  4 18:39 input.tar.gz
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc 176399695 Jun  4 22:16 HITS.pool.root.1
[2025-06-04 23:09:18] -rw-------. 1 boinc boinc   1525760 Jun  4 22:19 result.tar.gz
23:09:20 (32473): run_atlas exited; CPU time 49197.135484
23:09:20 (32473): called boinc_finish(0)

</stderr_txt>
]]>

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