Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:44:33 (4178166): wrapper (7.7.26015): starting
04:44:33 (4178166): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 04:44:33] Arguments: --nthreads 4
[2025-06-06 04:44:33] Threads: 4
[2025-06-06 04:44:33] Checking for CVMFS
[2025-06-06 04:44:33] No cvmfs_config command found, will try listing directly
[2025-06-06 04:44:33] CVMFS is ok
[2025-06-06 04:44:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 04:44:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 04:44:33] Further information can be found at the LHC@home message board.
[2025-06-06 04:44:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 04:44:33] Checking for apptainer binary...
[2025-06-06 04:44:33] which: no apptainer in ((null))
[2025-06-06 04:44:33] apptainer is not installed, using version from CVMFS
[2025-06-06 04:44:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 04:44:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-06-06 04:44:34] apptainer works
[2025-06-06 04:44:34] Set ATHENA_PROC_NUMBER=4
[2025-06-06 04:44:34] Set ATHENA_CORE_NUMBER=4
[2025-06-06 04:44:34] Starting ATLAS job with PandaID=6678285960
[2025-06-06 04:44:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 07:37:46]  *** The last 200 lines of the pilot log: ***
[2025-06-06 07:37:46] 2025-06-06 05:33:34,771 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2866369/.job.ad'
[2025-06-06 07:37:46] 2025-06-06 05:33:34,772 | INFO     | total number of processed events: 400 (read)
[2025-06-06 07:37:46] 2025-06-06 05:33:34,776 | INFO     | executing command: lscpu
[2025-06-06 07:37:46] 2025-06-06 05:33:34,820 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 07:37:46] 2025-06-06 05:33:37,071 | INFO     | monitor loop #743: job 0:6678285960 is in state 'finished'
[2025-06-06 07:37:46] 2025-06-06 05:33:37,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 07:37:46] 2025-06-06 05:33:37,615 | INFO     | PID=4181822 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 07:37:46] 2025-06-06 05:33:37,615 | INFO     | .. there are 3 such processes running
[2025-06-06 07:37:46] 2025-06-06 05:33:38,523 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 07:37:46] 2025-06-06 05:33:38,524 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6678285960/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:37:46] 2025-06-06 05:33:38,524 | INFO     | extracted standard info from prmon json
[2025-06-06 07:37:46] 2025-06-06 05:33:38,525 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 07:37:46] 2025-06-06 05:33:38,525 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 07:37:46] 2025-06-06 05:33:38,525 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 07:37:46] 2025-06-06 05:33:38,525 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 07:37:46] 2025-06-06 05:33:38,529 | INFO     | fitting pss+swap vs Time
[2025-06-06 07:37:46] 2025-06-06 05:33:38,529 | INFO     | sum of square deviations: 1418361477.5
[2025-06-06 07:37:46] 2025-06-06 05:33:38,530 | INFO     | sum of deviations: 16503260402.5
[2025-06-06 07:37:46] 2025-06-06 05:33:38,530 | INFO     | mean x: 1749182941.5
[2025-06-06 07:37:46] 2025-06-06 05:33:38,531 | INFO     | mean y: 2325445.487951807
[2025-06-06 07:37:46] 2025-06-06 05:33:38,531 | INFO     | -- intersect: -20350188376.352943
[2025-06-06 07:37:46] 2025-06-06 05:33:38,531 | INFO     | intersect: -20350188376.352943
[2025-06-06 07:37:46] 2025-06-06 05:33:38,531 | INFO     | chi2: 1.710478076027164
[2025-06-06 07:37:46] 2025-06-06 05:33:38,532 | INFO     | sum of square deviations: 1294014960.0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,533 | INFO     | sum of deviations: 15973085825.999996
[2025-06-06 07:37:46] 2025-06-06 05:33:38,533 | INFO     | mean x: 1749182789.0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,533 | INFO     | mean y: 2324795.0745341615
[2025-06-06 07:37:46] 2025-06-06 05:33:38,533 | INFO     | -- intersect: -21589270107.397877
[2025-06-06 07:37:46] 2025-06-06 05:33:38,533 | INFO     | intersect: -21589270107.397877
[2025-06-06 07:37:46] 2025-06-06 05:33:38,533 | INFO     | chi2: 1.7123610066977786
[2025-06-06 07:37:46] 2025-06-06 05:33:38,534 | INFO     | current chi2=1.7123610066977786 (change=-0.11008212832449132 %)
[2025-06-06 07:37:46] 2025-06-06 05:33:38,534 | INFO     | right removable region: 160
[2025-06-06 07:37:46] 2025-06-06 05:33:38,534 | INFO     | sum of square deviations: 1294014960.0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,535 | INFO     | sum of deviations: -10273773781.0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,535 | INFO     | mean x: 1749183094.0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,535 | INFO     | mean y: 2357899.6583850933
[2025-06-06 07:37:46] 2025-06-06 05:33:38,535 | INFO     | -- intersect: 13889918681.262995
[2025-06-06 07:37:46] 2025-06-06 05:33:38,535 | INFO     | intersect: 13889918681.262995
[2025-06-06 07:37:46] 2025-06-06 05:33:38,536 | INFO     | chi2: 0.05442260004098765
[2025-06-06 07:37:46] 2025-06-06 05:33:38,536 | INFO     | current chi2=0.05442260004098765 (change=96.81828134462897 %)
[2025-06-06 07:37:46] 2025-06-06 05:33:38,536 | INFO     | sum of square deviations: 1177156955.0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,537 | INFO     | sum of deviations: -9156713355.000002
[2025-06-06 07:37:46] 2025-06-06 05:33:38,537 | INFO     | mean x: 1749183246.5
[2025-06-06 07:37:46] 2025-06-06 05:33:38,537 | INFO     | mean y: 2356410.5897435895
[2025-06-06 07:37:46] 2025-06-06 05:33:38,538 | INFO     | -- intersect: 13608672480.453857
[2025-06-06 07:37:46] 2025-06-06 05:33:38,538 | INFO     | intersect: 13608672480.453857
[2025-06-06 07:37:46] 2025-06-06 05:33:38,538 | INFO     | chi2: 0.050930182059790795
[2025-06-06 07:37:46] 2025-06-06 05:33:38,538 | INFO     | current chi2=0.050930182059790795 (change=6.417220012580415 %)
[2025-06-06 07:37:46] 2025-06-06 05:33:38,538 | INFO     | left removable region: 20
[2025-06-06 07:37:46] 2025-06-06 05:33:38,539 | INFO     | sum of square deviations: 850825255.0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,539 | INFO     | sum of deviations: -3000679365.0000024
[2025-06-06 07:37:46] 2025-06-06 05:33:38,540 | INFO     | mean x: 1749183368.5
[2025-06-06 07:37:46] 2025-06-06 05:33:38,540 | INFO     | mean y: 2347707.9142857143
[2025-06-06 07:37:46] 2025-06-06 05:33:38,540 | INFO     | -- intersect: 6171344700.67415
[2025-06-06 07:37:46] 2025-06-06 05:33:38,540 | INFO     | intersect: 6171344700.67415
[2025-06-06 07:37:46] 2025-06-06 05:33:38,540 | INFO     | chi2: 0.02994509204029882
[2025-06-06 07:37:46] 2025-06-06 05:33:38,541 | INFO     | -- intersect: 6171344700.67415
[2025-06-06 07:37:46] 2025-06-06 05:33:38,541 | INFO     | current memory leak: -3.53 B/s (using 140 data points, chi2=0.03)
[2025-06-06 07:37:46] 2025-06-06 05:33:38,541 | INFO     | ..............................
[2025-06-06 07:37:46] 2025-06-06 05:33:38,541 | INFO     | . Timing measurements:
[2025-06-06 07:37:46] 2025-06-06 05:33:38,541 | INFO     | . get job = 0 s
[2025-06-06 07:37:46] 2025-06-06 05:33:38,542 | INFO     | . initial setup = 1 s
[2025-06-06 07:37:46] 2025-06-06 05:33:38,542 | INFO     | . payload setup = 6 s
[2025-06-06 07:37:46] 2025-06-06 05:33:38,542 | INFO     | . stage-in = 0 s
[2025-06-06 07:37:46] 2025-06-06 05:33:38,542 | INFO     | . payload execution = 10102 s
[2025-06-06 07:37:46] 2025-06-06 05:33:38,542 | INFO     | . stage-out = 0 s
[2025-06-06 07:37:46] 2025-06-06 05:33:38,542 | INFO     | . log creation = 0 s
[2025-06-06 07:37:46] 2025-06-06 05:33:38,542 | INFO     | ..............................
[2025-06-06 07:37:46] 2025-06-06 05:33:38,854 | INFO     | 
[2025-06-06 07:37:46] 2025-06-06 05:33:38,855 | INFO     | job summary report
[2025-06-06 07:37:46] 2025-06-06 05:33:38,855 | INFO     | --------------------------------------------------
[2025-06-06 07:37:46] 2025-06-06 05:33:38,855 | INFO     | PanDA job id: 6678285960
[2025-06-06 07:37:46] 2025-06-06 05:33:38,855 | INFO     | task id: 45006595
[2025-06-06 07:37:46] 2025-06-06 05:33:38,855 | INFO     | errors: (none)
[2025-06-06 07:37:46] 2025-06-06 05:33:38,855 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 07:37:46] 2025-06-06 05:33:38,856 | INFO     | pilot state: finished 
[2025-06-06 07:37:46] 2025-06-06 05:33:38,856 | INFO     | transexitcode: 0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,856 | INFO     | exeerrorcode: 0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,856 | INFO     | exeerrordiag: 
[2025-06-06 07:37:46] 2025-06-06 05:33:38,856 | INFO     | exitcode: 0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,856 | INFO     | exitmsg: OK
[2025-06-06 07:37:46] 2025-06-06 05:33:38,857 | INFO     | cpuconsumptiontime: 38488 s
[2025-06-06 07:37:46] 2025-06-06 05:33:38,857 | INFO     | nevents: 400
[2025-06-06 07:37:46] 2025-06-06 05:33:38,857 | INFO     | neventsw: 0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,857 | INFO     | pid: 4189114
[2025-06-06 07:37:46] 2025-06-06 05:33:38,857 | INFO     | pgrp: 4189114
[2025-06-06 07:37:46] 2025-06-06 05:33:38,857 | INFO     | corecount: 4
[2025-06-06 07:37:46] 2025-06-06 05:33:38,857 | INFO     | event service: False
[2025-06-06 07:37:46] 2025-06-06 05:33:38,858 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 11: 2397643, 10113: 2426162, 10115: 2435309, 10121: 2435423}
[2025-06-06 07:37:46] 2025-06-06 05:33:38,858 | INFO     | --------------------------------------------------
[2025-06-06 07:37:46] 2025-06-06 05:33:38,858 | INFO     | 
[2025-06-06 07:37:46] 2025-06-06 05:33:38,858 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-06 07:37:46] 2025-06-06 05:33:38,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,876 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,876 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,877 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,878 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 07:37:46] 2025-06-06 05:33:38,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,879 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 07:37:46] 2025-06-06 05:33:38,879 | INFO     | job 6678285960 has completed (purged errors)
[2025-06-06 07:37:46] 2025-06-06 05:33:38,879 | INFO     | overall cleanup function is called
[2025-06-06 07:37:46] 2025-06-06 05:33:39,887 | INFO     | --- collectZombieJob: --- 10, [4189114]
[2025-06-06 07:37:46] 2025-06-06 05:33:39,887 | INFO     | zombie collector waiting for pid 4189114
[2025-06-06 07:37:46] 2025-06-06 05:33:39,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 07:37:46] 2025-06-06 05:33:39,888 | INFO     | collected zombie processes
[2025-06-06 07:37:46] 2025-06-06 05:33:39,888 | INFO     | will attempt to kill all subprocesses of pid=4189114
[2025-06-06 07:37:46] 2025-06-06 05:33:40,179 | INFO     | process IDs to be killed: [4189114] (in reverse order)
[2025-06-06 07:37:46] 2025-06-06 05:33:40,263 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 07:37:46] 2025-06-06 05:33:40,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 07:37:46] 2025-06-06 05:33:40,272 | INFO     | did not find any defunct processes belonging to 4189114
[2025-06-06 07:37:46] 2025-06-06 05:33:40,279 | INFO     | did not find any defunct processes belonging to 4189114
[2025-06-06 07:37:46] 2025-06-06 05:33:40,280 | INFO     | ready for new job
[2025-06-06 07:37:46] 2025-06-06 05:33:40,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 07:37:46] 2025-06-06 05:33:40,282 | INFO     | **************************************
[2025-06-06 07:37:46] 2025-06-06 05:33:40,282 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 07:37:46] 2025-06-06 05:33:40,282 | INFO     | **************************************
[2025-06-06 07:37:46] 2025-06-06 05:33:40,282 | INFO     | 
[2025-06-06 07:37:46] 2025-06-06 05:33:40,285 | INFO     | architecture information:
[2025-06-06 07:37:46] 2025-06-06 05:33:40,285 | INFO     | executing command: cat /etc/os-release
[2025-06-06 07:37:46] 2025-06-06 05:33:40,299 | INFO     | cat /etc/os-release:
[2025-06-06 07:37:46] NAME="CentOS Linux"
[2025-06-06 07:37:46] VERSION="7 (Core)"
[2025-06-06 07:37:46] ID="centos"
[2025-06-06 07:37:46] ID_LIKE="rhel fedora"
[2025-06-06 07:37:46] VERSION_ID="7"
[2025-06-06 07:37:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 07:37:46] ANSI_COLOR="0;31"
[2025-06-06 07:37:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 07:37:46] HOME_URL="https://www.centos.org/"
[2025-06-06 07:37:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 07:37:46] 
[2025-06-06 07:37:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 07:37:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 07:37:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 07:37:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 07:37:46] 
[2025-06-06 07:37:46] 2025-06-06 05:33:40,299 | INFO     | **************************************
[2025-06-06 07:37:46] 2025-06-06 05:33:40,802 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-06 07:37:46] 2025-06-06 05:33:40,816 | INFO     | sufficient remaining disk space (1642470572032 B)
[2025-06-06 07:37:46] 2025-06-06 05:33:40,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 07:37:46] 2025-06-06 05:33:40,817 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 07:37:46] 2025-06-06 05:33:40,817 | INFO     | update_server=False
[2025-06-06 07:37:46] 2025-06-06 05:33:40,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 07:37:46] 2025-06-06 05:33:40,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:37:46] 2025-06-06 05:33:40,818 | INFO     | aborting loop
[2025-06-06 07:37:46] 2025-06-06 05:33:41,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 07:37:46] 2025-06-06 05:33:41,464 | INFO     | all payload control threads have been joined
[2025-06-06 07:37:46] 2025-06-06 05:33:41,469 | INFO     | all data control threads have been joined
[2025-06-06 07:37:46] 2025-06-06 05:33:41,627 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 07:37:46] 2025-06-06 05:33:41,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 07:37:46] 2025-06-06 05:33:41,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 07:37:46] 2025-06-06 05:33:41,823 | INFO     | [job] retrieve thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:41,823 | INFO     | [job] job monitor thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:41,836 | INFO     | [payload] validate_post thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:41,842 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:42,080 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:42,278 | INFO     | all job control threads have been joined
[2025-06-06 07:37:46] 2025-06-06 05:33:42,433 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:42,466 | INFO     | [payload] control thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:42,475 | INFO     | [data] control thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:42,623 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:42,768 | INFO     | [payload] failed_post thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:42,993 | INFO     | [job] validate thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:43,007 | INFO     | [data] copytool_out thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:43,111 | INFO     | [data] copytool_in thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:43,284 | INFO     | [job] control thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:43,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 07:37:46] 2025-06-06 05:33:43,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:37:46] 2025-06-06 05:33:44,669 | INFO     | [job] queue monitor thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:47,643 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 07:37:46] 2025-06-06 05:33:48,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22848172504896)>', '<ExcThread(monitor, started 22847932032768)>']
[2025-06-06 07:37:46] 2025-06-06 05:33:49,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 07:37:46] 2025-06-06 05:33:49,668 | INFO     | [monitor] control thread has ended
[2025-06-06 07:37:46] 2025-06-06 05:33:53,671 | INFO     | all workflow threads have been joined
[2025-06-06 07:37:46] 2025-06-06 05:33:53,672 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 07:37:46] 2025-06-06 05:33:53,672 | INFO     | traces error code: 0
[2025-06-06 07:37:46] 2025-06-06 05:33:53,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 07:37:46] 2025-06-06 05:33:53,796 [wrapper] ==== pilot stdout END ====
[2025-06-06 07:37:46] 2025-06-06 05:33:53,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 07:37:46] 2025-06-06 05:33:53,802 [wrapper] pilotpid: 4181822
[2025-06-06 07:37:46] 2025-06-06 05:33:53,805 [wrapper] Pilot exit status: 0
[2025-06-06 07:37:46] 2025-06-06 05:33:53,815 [wrapper] pandaids: 6678285960
[2025-06-06 07:37:46] 2025-06-06 05:33:53,865 [wrapper] cleanup supervisor_pilot  141779 4181823
[2025-06-06 07:37:46] 2025-06-06 05:33:53,869 [wrapper] Test setup, not cleaning
[2025-06-06 07:37:46] 2025-06-06 05:33:53,872 [wrapper] apfmon messages muted
[2025-06-06 07:37:46] 2025-06-06 05:33:53,874 [wrapper] ==== wrapper stdout END ====
[2025-06-06 07:37:46] 2025-06-06 05:33:53,877 [wrapper] ==== wrapper stderr END ====
[2025-06-06 07:37:46]  *** Error codes and diagnostics ***
[2025-06-06 07:37:46]     "exeErrorCode": 0,
[2025-06-06 07:37:46]     "exeErrorDiag": "",
[2025-06-06 07:37:46]     "pilotErrorCode": 0,
[2025-06-06 07:37:46]     "pilotErrorDiag": "",
[2025-06-06 07:37:46]  *** Listing of results directory ***
[2025-06-06 07:37:46] total 395180
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:04 queuedata.json
[2025-06-06 07:37:46] -rwx------ 1 boinc boinc     37140 Jun  4 05:05 runpilot2-wrapper.sh
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc       100 Jun  6 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 07:37:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 04:44 run_atlas
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc       105 Jun  6 04:44 job.xml
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc      6422 Jun  6 04:44 init_data.xml
[2025-06-06 07:37:46] -rw-r--r-- 2 boinc boinc 216652181 Jun  6 04:44 EVNT.45006593._002045.pool.root.1
[2025-06-06 07:37:46] -rw-r--r-- 2 boinc boinc     15093 Jun  6 04:44 start_atlas.sh
[2025-06-06 07:37:46] drwxrwx--x 2 boinc boinc      4096 Jun  6 04:44 shared
[2025-06-06 07:37:46] -rw-r--r-- 2 boinc boinc    508886 Jun  6 04:44 input.tar.gz
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc         0 Jun  6 04:44 boinc_lockfile
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc      2525 Jun  6 04:44 pandaJob.out
[2025-06-06 07:37:46] -rw------- 1 boinc boinc    987721 Jun  6 04:44 agis_schedconf.cvmfs.json
[2025-06-06 07:37:46] -rw------- 1 boinc boinc   1598969 Jun  6 04:44 agis_ddmendpoints.agis.ALL.json
[2025-06-06 07:37:46] drwx------ 4 boinc boinc      4096 Jun  6 04:44 pilot3
[2025-06-06 07:37:46] -rw------- 1 boinc boinc 181641829 Jun  6 07:32 HITS.45006595._051054.pool.root.1
[2025-06-06 07:37:46] -rw------- 1 boinc boinc        95 Jun  6 07:33 pilot_heartbeat.json
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc       528 Jun  6 07:33 boinc_task_state.xml
[2025-06-06 07:37:46] -rw------- 1 boinc boinc      1037 Jun  6 07:33 memory_monitor_summary.json
[2025-06-06 07:37:46] -rw------- 1 boinc boinc    312737 Jun  6 07:33 log.45006595._051054.job.log.tgz.1
[2025-06-06 07:37:46] -rw------- 1 boinc boinc      7731 Jun  6 07:33 heartbeat.json
[2025-06-06 07:37:46] -rw------- 1 boinc boinc      4364 Jun  6 07:33 pilotlog.txt
[2025-06-06 07:37:46] -rw------- 1 boinc boinc    954208 Jun  6 07:33 log.45006595._051054.job.log.1
[2025-06-06 07:37:46] -rw------- 1 boinc boinc       357 Jun  6 07:33 output.list
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc       620 Jun  6 07:33 runtime_log
[2025-06-06 07:37:46] -rw------- 1 boinc boinc   1290240 Jun  6 07:33 result.tar.gz
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc      9026 Jun  6 07:33 runtime_log.err
[2025-06-06 07:37:46] -rw------- 1 boinc boinc       664 Jun  6 07:33 fI8LDmNctg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0zmKDmdVGIOn.diag
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc        26 Jun  6 07:37 wrapper_checkpoint.txt
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc      8192 Jun  6 07:37 boinc_mmap_file
[2025-06-06 07:37:46] -rw-r--r-- 1 boinc boinc     21023 Jun  6 07:37 stderr.txt
[2025-06-06 07:37:46] HITS file was successfully produced:
[2025-06-06 07:37:46] -rw------- 1 boinc boinc 181641829 Jun  6 07:32 shared/HITS.pool.root.1
[2025-06-06 07:37:46]  *** Contents of shared directory: ***
[2025-06-06 07:37:46] total 390744
[2025-06-06 07:37:46] -rw-r--r-- 2 boinc boinc 216652181 Jun  6 04:44 ATLAS.root_0
[2025-06-06 07:37:46] -rw-r--r-- 2 boinc boinc     15093 Jun  6 04:44 start_atlas.sh
[2025-06-06 07:37:46] -rw-r--r-- 2 boinc boinc    508886 Jun  6 04:44 input.tar.gz
[2025-06-06 07:37:46] -rw------- 1 boinc boinc 181641829 Jun  6 07:32 HITS.pool.root.1
[2025-06-06 07:37:46] -rw------- 1 boinc boinc   1290240 Jun  6 07:33 result.tar.gz
07:37:48 (4178166): run_atlas exited; CPU time 38897.756873
07:37:48 (4178166): called boinc_finish(0)

</stderr_txt>
]]>

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