Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:01:45 (3337443): wrapper (7.7.26015): starting
04:01:45 (3337443): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:01:45] Arguments: --nthreads 8
[2025-06-04 04:01:45] Threads: 8
[2025-06-04 04:01:45] Checking for CVMFS
[2025-06-04 04:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:01:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:01:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:01:45] 2.12.6.0 3854649 23006 467644 146772 3 390 24386434 32935937 8982 16776704 0 109347730 99.675 101133567 32668 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 04:01:45] CVMFS is ok
[2025-06-04 04:01:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:01:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:01:45] Further information can be found at the LHC@home message board.
[2025-06-04 04:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:01:45] Checking for apptainer binary...
[2025-06-04 04:01:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:01:45] Running /usr/bin/apptainer --version
[2025-06-04 04:01:45] apptainer version 1.4.1-1.el9
[2025-06-04 04:01:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:01:45] c6-4-5-3.aglt2.org
[2025-06-04 04:01:45] apptainer works
[2025-06-04 04:01:45] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:01:45] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:01:45] Starting ATLAS job with PandaID=6678285889
[2025-06-04 04:01:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:02:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:02:40]  guid=4e99a217-54ed-4112-b779-d9785cec9ef3
[2025-06-04 05:02:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 05:02:40]  is_altstaged=None
[2025-06-04 05:02:40]  is_tar=False
[2025-06-04 05:02:40]  lfn=log.45006595._050983.job.log.tgz.1
[2025-06-04 05:02:40]  mtime=0
[2025-06-04 05:02:40]  protocol_id=None
[2025-06-04 05:02:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:02:40]  replicas=None
[2025-06-04 05:02:40]  scope=mc23_13p6TeV
[2025-06-04 05:02:40]  status=None
[2025-06-04 05:02:40]  status_code=0
[2025-06-04 05:02:40]  storage_token=
[2025-06-04 05:02:40]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678285889/log.45006595._050983.job.log.tgz.1
[2025-06-04 05:02:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/0a/log.45006595._050983.job.log.tgz.1
[2025-06-04 05:02:40]  workdir=None
[2025-06-04 05:02:40] ]
[2025-06-04 05:02:40] 2025-06-04 09:02:13,764 | INFO     | transferring file log.45006595._050983.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678285889/log.45006595._050983.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:02:40] 2025-06-04 09:02:13,764 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678285889/log.45006595._050983.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._050983.job
[2025-06-04 05:02:40] 2025-06-04 09:02:13,783 | INFO     | adding to output.list: log.45006595._050983.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/0a/log.45006595._050983.job.log.tg
[2025-06-04 05:02:40] 2025-06-04 09:02:13,784 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:02:40] 2025-06-04 09:02:13,784 | INFO     | summary of transferred files:
[2025-06-04 05:02:40] 2025-06-04 09:02:13,784 | INFO     |  -- lfn=log.45006595._050983.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:02:40] 2025-06-04 09:02:13,784 | INFO     | stage-out finished correctly
[2025-06-04 05:02:40] 2025-06-04 09:02:15,997 | INFO     | monitor loop #272: job 0:6678285889 is in state 'finished'
[2025-06-04 05:02:40] 2025-06-04 09:02:15,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:02:40] 2025-06-04 09:02:16,335 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:02:40] 2025-06-04 09:02:16,895 | INFO     | job 6678285889 has state=finished
[2025-06-04 05:02:40] 2025-06-04 09:02:16,895 | INFO     | preparing for final server update for job 6678285889 in state='finished'
[2025-06-04 05:02:40] 2025-06-04 09:02:16,896 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:02:40] 2025-06-04 09:02:16,896 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:02:40] 2025-06-04 09:02:16,896 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:02:40] 2025-06-04 09:02:16,896 | INFO     | job 6678285889 has finished - writing final server update
[2025-06-04 05:02:40] 2025-06-04 09:02:16,896 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:02:40] 2025-06-04 09:02:16,912 | INFO     | executing command: lscpu
[2025-06-04 05:02:40] 2025-06-04 09:02:16,977 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:02:40] 2025-06-04 09:02:18,500 | INFO     | monitor loop #273: job 0:6678285889 is in state 'finished'
[2025-06-04 05:02:40] 2025-06-04 09:02:18,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:02:40] 2025-06-04 09:02:18,873 | INFO     | PID=3341076 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 05:02:40] 2025-06-04 09:02:18,873 | INFO     | .. there are 17 such processes running
[2025-06-04 05:02:40] 2025-06-04 09:02:20,208 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 05:02:40] 2025-06-04 09:02:20,209 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678285889/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:02:40] 2025-06-04 09:02:20,209 | INFO     | extracted standard info from prmon json
[2025-06-04 05:02:40] 2025-06-04 09:02:20,209 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:02:40] 2025-06-04 09:02:20,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:02:40] 2025-06-04 09:02:20,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:02:40] 2025-06-04 09:02:20,210 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:02:40] 2025-06-04 09:02:20,212 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:02:40] 2025-06-04 09:02:20,212 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 05:02:40] 2025-06-04 09:02:20,212 | INFO     | sum of deviations: 4082785967.499999
[2025-06-04 05:02:40] 2025-06-04 09:02:20,212 | INFO     | mean x: 1749025997.5
[2025-06-04 05:02:40] 2025-06-04 09:02:20,212 | INFO     | mean y: 2172193.596153846
[2025-06-04 05:02:40] 2025-06-04 09:02:20,213 | INFO     | -- intersect: -163839761518.8792
[2025-06-04 05:02:40] 2025-06-04 09:02:20,213 | INFO     | intersect: -163839761518.8792
[2025-06-04 05:02:40] 2025-06-04 09:02:20,213 | INFO     | chi2: 0.6560286258967065
[2025-06-04 05:02:40] 2025-06-04 09:02:20,213 | INFO     | -- intersect: -163839761518.8792
[2025-06-04 05:02:40] 2025-06-04 09:02:20,213 | INFO     | current memory leak: 93.68 B/s (using 52 data points, chi2=0.66)
[2025-06-04 05:02:40] 2025-06-04 09:02:20,213 | INFO     | ..............................
[2025-06-04 05:02:40] 2025-06-04 09:02:20,213 | INFO     | . Timing measurements:
[2025-06-04 05:02:40] 2025-06-04 09:02:20,214 | INFO     | . get job = 0 s
[2025-06-04 05:02:40] 2025-06-04 09:02:20,214 | INFO     | . initial setup = 2 s
[2025-06-04 05:02:40] 2025-06-04 09:02:20,214 | INFO     | . payload setup = 5 s
[2025-06-04 05:02:40] 2025-06-04 09:02:20,214 | INFO     | . stage-in = 0 s
[2025-06-04 05:02:40] 2025-06-04 09:02:20,214 | INFO     | . payload execution = 3596 s
[2025-06-04 05:02:40] 2025-06-04 09:02:20,214 | INFO     | . stage-out = 2 s
[2025-06-04 05:02:40] 2025-06-04 09:02:20,214 | INFO     | . log creation = 0 s
[2025-06-04 05:02:40] 2025-06-04 09:02:20,214 | INFO     | ..............................
[2025-06-04 05:02:40] 2025-06-04 09:02:20,296 | INFO     | 
[2025-06-04 05:02:40] 2025-06-04 09:02:20,296 | INFO     | job summary report
[2025-06-04 05:02:40] 2025-06-04 09:02:20,296 | INFO     | --------------------------------------------------
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | PanDA job id: 6678285889
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | task id: 45006595
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | errors: (none)
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | pilot state: finished 
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | transexitcode: 0
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | exeerrorcode: 0
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | exeerrordiag: 
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | exitcode: 0
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | exitmsg: OK
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | cpuconsumptiontime: 23862 s
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | nevents: 400
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | neventsw: 0
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | pid: 3347585
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | pgrp: 3347585
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | corecount: 8
[2025-06-04 05:02:40] 2025-06-04 09:02:20,297 | INFO     | event service: False
[2025-06-04 05:02:40] 2025-06-04 09:02:20,298 | INFO     | sizes: {0: 2405184, 1: 2405184, 4: 2405418, 11: 2405446, 3602: 2431127, 3606: 2440238, 3608: 2440422, 3612: 2440422}
[2025-06-04 05:02:40] 2025-06-04 09:02:20,298 | INFO     | --------------------------------------------------
[2025-06-04 05:02:40] 2025-06-04 09:02:20,298 | INFO     | 
[2025-06-04 05:02:40] 2025-06-04 09:02:20,298 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 05:02:40] 2025-06-04 09:02:20,318 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,318 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,318 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,318 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | job 6678285889 has completed (purged errors)
[2025-06-04 05:02:40] 2025-06-04 09:02:20,319 | INFO     | overall cleanup function is called
[2025-06-04 05:02:40] 2025-06-04 09:02:21,322 | INFO     | --- collectZombieJob: --- 10, [3347585]
[2025-06-04 05:02:40] 2025-06-04 09:02:21,322 | INFO     | zombie collector waiting for pid 3347585
[2025-06-04 05:02:40] 2025-06-04 09:02:21,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:02:40] 2025-06-04 09:02:21,323 | INFO     | collected zombie processes
[2025-06-04 05:02:40] 2025-06-04 09:02:21,323 | INFO     | will attempt to kill all subprocesses of pid=3347585
[2025-06-04 05:02:40] 2025-06-04 09:02:21,574 | INFO     | process IDs to be killed: [3347585] (in reverse order)
[2025-06-04 05:02:40] 2025-06-04 09:02:21,657 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:02:40] 2025-06-04 09:02:21,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:02:40] 2025-06-04 09:02:21,670 | INFO     | did not find any defunct processes belonging to 3347585
[2025-06-04 05:02:40] 2025-06-04 09:02:21,677 | INFO     | did not find any defunct processes belonging to 3347585
[2025-06-04 05:02:40] 2025-06-04 09:02:21,677 | INFO     | ready for new job
[2025-06-04 05:02:40] 2025-06-04 09:02:21,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:02:40] 2025-06-04 09:02:21,678 | INFO     | **************************************
[2025-06-04 05:02:40] 2025-06-04 09:02:21,678 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:02:40] 2025-06-04 09:02:21,678 | INFO     | **************************************
[2025-06-04 05:02:40] 2025-06-04 09:02:21,678 | INFO     | 
[2025-06-04 05:02:40] 2025-06-04 09:02:21,692 | INFO     | architecture information:
[2025-06-04 05:02:40] 2025-06-04 09:02:21,692 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:02:40] 2025-06-04 09:02:21,702 | INFO     | cat /etc/os-release:
[2025-06-04 05:02:40] NAME="CentOS Linux"
[2025-06-04 05:02:40] VERSION="7 (Core)"
[2025-06-04 05:02:40] ID="centos"
[2025-06-04 05:02:40] ID_LIKE="rhel fedora"
[2025-06-04 05:02:40] VERSION_ID="7"
[2025-06-04 05:02:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:02:40] ANSI_COLOR="0;31"
[2025-06-04 05:02:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:02:40] HOME_URL="https://www.centos.org/"
[2025-06-04 05:02:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:02:40] 
[2025-06-04 05:02:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:02:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:02:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:02:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:02:40] 
[2025-06-04 05:02:40] 2025-06-04 09:02:21,702 | INFO     | **************************************
[2025-06-04 05:02:40] 2025-06-04 09:02:22,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 05:02:40] 2025-06-04 09:02:22,220 | INFO     | sufficient remaining disk space (76075237376 B)
[2025-06-04 05:02:40] 2025-06-04 09:02:22,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:02:40] 2025-06-04 09:02:22,220 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:02:40] 2025-06-04 09:02:22,220 | INFO     | update_server=False
[2025-06-04 05:02:40] 2025-06-04 09:02:22,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:02:40] 2025-06-04 09:02:22,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:02:40] 2025-06-04 09:02:22,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:02:40] 2025-06-04 09:02:22,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:02:40] 2025-06-04 09:02:22,222 | INFO     | aborting loop
[2025-06-04 05:02:40] 2025-06-04 09:02:22,344 | INFO     | all data control threads have been joined
[2025-06-04 05:02:40] 2025-06-04 09:02:22,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:02:40] 2025-06-04 09:02:22,884 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:02:40] 2025-06-04 09:02:22,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:02:40] 2025-06-04 09:02:22,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:02:40] 2025-06-04 09:02:23,225 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:23,226 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:23,227 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:23,349 | INFO     | [data] control thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:23,440 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:23,611 | INFO     | [job] validate thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:23,641 | INFO     | all payload control threads have been joined
[2025-06-04 05:02:40] 2025-06-04 09:02:23,712 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:23,836 | INFO     | all job control threads have been joined
[2025-06-04 05:02:40] 2025-06-04 09:02:23,914 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:24,026 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:24,226 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:24,295 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:24,323 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:24,645 | INFO     | [payload] control thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:24,838 | INFO     | [job] control thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:26,424 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:32,863 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:02:40] 2025-06-04 09:02:33,869 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:02:40] 2025-06-04 09:02:34,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594003629888)>', '<ExcThread(monitor, started 140593497876224)>']
[2025-06-04 05:02:40] 2025-06-04 09:02:35,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:02:40] 2025-06-04 09:02:35,929 | INFO     | [monitor] control thread has ended
[2025-06-04 05:02:40] 2025-06-04 09:02:39,962 | INFO     | all workflow threads have been joined
[2025-06-04 05:02:40] 2025-06-04 09:02:39,962 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:02:40] 2025-06-04 09:02:39,962 | INFO     | traces error code: 0
[2025-06-04 05:02:40] 2025-06-04 09:02:39,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:02:40] 2025-06-04 09:02:40,090 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:02:40] 2025-06-04 09:02:40,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:02:40] 2025-06-04 09:02:40,094 [wrapper] pilotpid: 3341076
[2025-06-04 05:02:40] 2025-06-04 09:02:40,095 [wrapper] Pilot exit status: 0
[2025-06-04 05:02:40] 2025-06-04 09:02:40,102 [wrapper] pandaids: 6678285889
[2025-06-04 05:02:40] 2025-06-04 09:02:40,137 [wrapper] cleanup supervisor_pilot 3579832 3341077
[2025-06-04 05:02:40] 2025-06-04 09:02:40,140 [wrapper] Test setup, not cleaning
[2025-06-04 05:02:40] 2025-06-04 09:02:40,142 [wrapper] apfmon messages muted
[2025-06-04 05:02:40] 2025-06-04 09:02:40,145 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:02:40] 2025-06-04 09:02:40,147 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:02:40]  *** Error codes and diagnostics ***
[2025-06-04 05:02:40]     "exeErrorCode": 0,
[2025-06-04 05:02:40]     "exeErrorDiag": "",
[2025-06-04 05:02:40]     "pilotErrorCode": 0,
[2025-06-04 05:02:40]     "pilotErrorDiag": "",
[2025-06-04 05:02:40]  *** Listing of results directory ***
[2025-06-04 05:02:40] total 393500
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 22:59 queuedata.json
[2025-06-04 05:02:40] -rwx------. 1 boincer umatlas     37140 Jun  3 23:00 runpilot2-wrapper.sh
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas       100 Jun  4 04:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:02:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 04:01 run_atlas
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas       105 Jun  4 04:01 job.xml
[2025-06-04 05:02:40] -rw-r--r--. 2 boincer umatlas 215897883 Jun  4 04:01 EVNT.45006593._002043.pool.root.1
[2025-06-04 05:02:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:01 start_atlas.sh
[2025-06-04 05:02:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 04:01 shared
[2025-06-04 05:02:40] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 04:01 input.tar.gz
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas         0 Jun  4 04:01 boinc_lockfile
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 04:01 pandaJob.out
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas    986745 Jun  4 04:01 agis_schedconf.cvmfs.json
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas   1603667 Jun  4 04:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:02:40] drwx------. 4 boincer umatlas      4096 Jun  4 04:01 pilot3
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas 181898966 Jun  4 05:01 HITS.45006595._050983.pool.root.1
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas        95 Jun  4 05:01 pilot_heartbeat.json
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas       529 Jun  4 05:01 boinc_task_state.xml
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas      1032 Jun  4 05:02 memory_monitor_summary.json
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas    283012 Jun  4 05:02 log.45006595._050983.job.log.tgz.1
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas      7705 Jun  4 05:02 heartbeat.json
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas      6855 Jun  4 05:02 init_data.xml
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas        27 Jun  4 05:02 wrapper_checkpoint.txt
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 05:02 boinc_mmap_file
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas      4425 Jun  4 05:02 pilotlog.txt
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas    374033 Jun  4 05:02 log.45006595._050983.job.log.1
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas       357 Jun  4 05:02 output.list
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas       620 Jun  4 05:02 runtime_log
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas    675840 Jun  4 05:02 result.tar.gz
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 05:02 runtime_log.err
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas       650 Jun  4 05:02 GEGNDmOXtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIymKDm3DvgNo.diag
[2025-06-04 05:02:40] -rw-r--r--. 1 boincer umatlas     21361 Jun  4 05:02 stderr.txt
[2025-06-04 05:02:40] HITS file was successfully produced:
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas 181898966 Jun  4 05:01 shared/HITS.pool.root.1
[2025-06-04 05:02:40]  *** Contents of shared directory: ***
[2025-06-04 05:02:40] total 389656
[2025-06-04 05:02:40] -rw-r--r--. 2 boincer umatlas 215897883 Jun  4 04:01 ATLAS.root_0
[2025-06-04 05:02:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:01 start_atlas.sh
[2025-06-04 05:02:40] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 04:01 input.tar.gz
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas 181898966 Jun  4 05:01 HITS.pool.root.1
[2025-06-04 05:02:40] -rw-------. 1 boincer umatlas    675840 Jun  4 05:02 result.tar.gz
05:02:41 (3337443): run_atlas exited; CPU time 23952.669033
05:02:41 (3337443): called boinc_finish(0)

</stderr_txt>
]]>

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