Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:01:21 (2301889): wrapper (7.7.26015): starting
04:01:21 (2301889): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:01:21] Arguments: --nthreads 8
[2025-06-04 04:01:21] Threads: 8
[2025-06-04 04:01:21] Checking for CVMFS
[2025-06-04 04:01:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:01:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:01:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:01:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:01:21] 2.12.6.0 6829 1070 156020 146772 2 213 25628753 32935937 10086 16776704 0 17059101 99.885 3356849 32899 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 04:01:21] CVMFS is ok
[2025-06-04 04:01:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:01:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:01:21] Further information can be found at the LHC@home message board.
[2025-06-04 04:01:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:01:21] Checking for apptainer binary...
[2025-06-04 04:01:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:01:21] Running /usr/bin/apptainer --version
[2025-06-04 04:01:21] apptainer version 1.4.1-1.el9
[2025-06-04 04:01:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:01:21] c6-8-25-3.aglt2.org
[2025-06-04 04:01:21] apptainer works
[2025-06-04 04:01:21] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:01:21] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:01:21] Starting ATLAS job with PandaID=6667666979
[2025-06-04 04:01:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:14:34]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:14:34]  filetype=log
[2025-06-04 05:14:34]  guid=0929f2af-1f13-4adf-953d-3581a24f7621
[2025-06-04 05:14:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 05:14:34]  is_altstaged=None
[2025-06-04 05:14:34]  is_tar=False
[2025-06-04 05:14:34]  lfn=log.44871837._073983.job.log.tgz.1
[2025-06-04 05:14:34]  mtime=0
[2025-06-04 05:14:34]  protocol_id=None
[2025-06-04 05:14:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:14:34]  replicas=None
[2025-06-04 05:14:34]  scope=mc23_13p6TeV
[2025-06-04 05:14:34]  status=None
[2025-06-04 05:14:34]  status_code=0
[2025-06-04 05:14:34]  storage_token=
[2025-06-04 05:14:34]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6667666979/log.44871837._073983.job.log.tgz.1
[2025-06-04 05:14:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/ef/log.44871837._073983.job.log.tgz.1
[2025-06-04 05:14:34]  workdir=None
[2025-06-04 05:14:34] ]
[2025-06-04 05:14:34] 2025-06-04 09:14:09,857 | INFO     | transferring file log.44871837._073983.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6667666979/log.44871837._073983.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:14:34] 2025-06-04 09:14:09,857 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6667666979/log.44871837._073983.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._073983.job
[2025-06-04 05:14:34] 2025-06-04 09:14:09,872 | INFO     | adding to output.list: log.44871837._073983.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/ef/log.44871837._073983.job.log.tg
[2025-06-04 05:14:34] 2025-06-04 09:14:09,873 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:14:34] 2025-06-04 09:14:09,873 | INFO     | summary of transferred files:
[2025-06-04 05:14:34] 2025-06-04 09:14:09,873 | INFO     |  -- lfn=log.44871837._073983.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:14:34] 2025-06-04 09:14:09,873 | INFO     | stage-out finished correctly
[2025-06-04 05:14:34] 2025-06-04 09:14:09,941 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:14:34] 2025-06-04 09:14:12,451 | INFO     | job 6667666979 has state=finished
[2025-06-04 05:14:34] 2025-06-04 09:14:12,451 | INFO     | preparing for final server update for job 6667666979 in state='finished'
[2025-06-04 05:14:34] 2025-06-04 09:14:12,452 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:14:34] 2025-06-04 09:14:12,452 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:14:34] 2025-06-04 09:14:12,452 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:14:34] 2025-06-04 09:14:12,452 | INFO     | job 6667666979 has finished - writing final server update
[2025-06-04 05:14:34] 2025-06-04 09:14:12,452 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:14:34] 2025-06-04 09:14:12,470 | INFO     | executing command: lscpu
[2025-06-04 05:14:34] 2025-06-04 09:14:12,544 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:14:34] 2025-06-04 09:14:12,720 | WARNING  | process 2312267 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 05:14:34] 2025-06-04 09:14:12,721 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667666979/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:14:34] 2025-06-04 09:14:12,893 | INFO     | number of running child processes to parent process 2312267: 1
[2025-06-04 05:14:34] 2025-06-04 09:14:12,893 | INFO     | maximum number of monitored processes: 6
[2025-06-04 05:14:34] 2025-06-04 09:14:15,179 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 05:14:34] 2025-06-04 09:14:15,180 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667666979/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:14:34] 2025-06-04 09:14:15,180 | INFO     | extracted standard info from prmon json
[2025-06-04 05:14:34] 2025-06-04 09:14:15,180 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:14:34] 2025-06-04 09:14:15,180 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:14:34] 2025-06-04 09:14:15,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:14:34] 2025-06-04 09:14:15,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | sum of square deviations: 85136480.0
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | sum of deviations: 7860549303.999999
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | mean x: 1749026366.0
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | mean y: 2157261.876923077
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | -- intersect: -161483353813.26907
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | intersect: -161483353813.26907
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | chi2: 0.73419209893853
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | -- intersect: -161483353813.26907
[2025-06-04 05:14:34] 2025-06-04 09:14:15,182 | INFO     | current memory leak: 92.33 B/s (using 65 data points, chi2=0.73)
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | ..............................
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | . Timing measurements:
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | . get job = 0 s
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | . initial setup = 2 s
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | . payload setup = 4 s
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | . stage-in = 0 s
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | . payload execution = 4339 s
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | . stage-out = 0 s
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | . log creation = 0 s
[2025-06-04 05:14:34] 2025-06-04 09:14:15,183 | INFO     | ..............................
[2025-06-04 05:14:34] 2025-06-04 09:14:15,234 | INFO     | 
[2025-06-04 05:14:34] 2025-06-04 09:14:15,234 | INFO     | job summary report
[2025-06-04 05:14:34] 2025-06-04 09:14:15,234 | INFO     | --------------------------------------------------
[2025-06-04 05:14:34] 2025-06-04 09:14:15,234 | INFO     | PanDA job id: 6667666979
[2025-06-04 05:14:34] 2025-06-04 09:14:15,234 | INFO     | task id: 44871837
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | errors: (none)
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | pilot state: finished 
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | transexitcode: 0
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | exeerrorcode: 0
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | exeerrordiag: 
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | exitcode: 0
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | exitmsg: OK
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | cpuconsumptiontime: 29400 s
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | nevents: 400
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | neventsw: 0
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | pid: 2312267
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | pgrp: 2312267
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | corecount: 8
[2025-06-04 05:14:34] 2025-06-04 09:14:15,235 | INFO     | event service: False
[2025-06-04 05:14:34] 2025-06-04 09:14:15,236 | INFO     | sizes: {0: 2405234, 3: 2405440, 11: 2405468, 4347: 2431480, 4348: 2440477, 4353: 2440591}
[2025-06-04 05:14:34] 2025-06-04 09:14:15,236 | INFO     | --------------------------------------------------
[2025-06-04 05:14:34] 2025-06-04 09:14:15,236 | INFO     | 
[2025-06-04 05:14:34] 2025-06-04 09:14:15,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 05:14:34] 2025-06-04 09:14:15,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,251 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,251 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,251 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:14:34] 2025-06-04 09:14:15,253 | INFO     | job 6667666979 has completed (purged errors)
[2025-06-04 05:14:34] 2025-06-04 09:14:15,253 | INFO     | overall cleanup function is called
[2025-06-04 05:14:34] 2025-06-04 09:14:16,260 | INFO     | --- collectZombieJob: --- 10, [2312267]
[2025-06-04 05:14:34] 2025-06-04 09:14:16,261 | INFO     | zombie collector waiting for pid 2312267
[2025-06-04 05:14:34] 2025-06-04 09:14:16,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:14:34] 2025-06-04 09:14:16,261 | INFO     | collected zombie processes
[2025-06-04 05:14:34] 2025-06-04 09:14:16,261 | INFO     | will attempt to kill all subprocesses of pid=2312267
[2025-06-04 05:14:34] 2025-06-04 09:14:16,448 | INFO     | process IDs to be killed: [2312267] (in reverse order)
[2025-06-04 05:14:34] 2025-06-04 09:14:16,536 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:14:34] 2025-06-04 09:14:16,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:14:34] 2025-06-04 09:14:16,551 | INFO     | did not find any defunct processes belonging to 2312267
[2025-06-04 05:14:34] 2025-06-04 09:14:16,565 | INFO     | did not find any defunct processes belonging to 2312267
[2025-06-04 05:14:34] 2025-06-04 09:14:16,566 | INFO     | ready for new job
[2025-06-04 05:14:34] 2025-06-04 09:14:16,566 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:14:34] 2025-06-04 09:14:16,567 | INFO     | **************************************
[2025-06-04 05:14:34] 2025-06-04 09:14:16,567 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:14:34] 2025-06-04 09:14:16,568 | INFO     | **************************************
[2025-06-04 05:14:34] 2025-06-04 09:14:16,568 | INFO     | 
[2025-06-04 05:14:34] 2025-06-04 09:14:16,584 | INFO     | architecture information:
[2025-06-04 05:14:34] 2025-06-04 09:14:16,584 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:14:34] 2025-06-04 09:14:16,595 | INFO     | cat /etc/os-release:
[2025-06-04 05:14:34] NAME="CentOS Linux"
[2025-06-04 05:14:34] VERSION="7 (Core)"
[2025-06-04 05:14:34] ID="centos"
[2025-06-04 05:14:34] ID_LIKE="rhel fedora"
[2025-06-04 05:14:34] VERSION_ID="7"
[2025-06-04 05:14:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:14:34] ANSI_COLOR="0;31"
[2025-06-04 05:14:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:14:34] HOME_URL="https://www.centos.org/"
[2025-06-04 05:14:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:14:34] 
[2025-06-04 05:14:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:14:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:14:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:14:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:14:34] 
[2025-06-04 05:14:34] 2025-06-04 09:14:16,596 | INFO     | **************************************
[2025-06-04 05:14:34] 2025-06-04 09:14:17,098 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 05:14:34] 2025-06-04 09:14:17,111 | INFO     | sufficient remaining disk space (75535220736 B)
[2025-06-04 05:14:34] 2025-06-04 09:14:17,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:14:34] 2025-06-04 09:14:17,112 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:14:34] 2025-06-04 09:14:17,112 | INFO     | update_server=False
[2025-06-04 05:14:34] 2025-06-04 09:14:17,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:14:34] 2025-06-04 09:14:17,112 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:14:34] 2025-06-04 09:14:17,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:14:34] 2025-06-04 09:14:17,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:14:34] 2025-06-04 09:14:17,113 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:14:34] 2025-06-04 09:14:17,113 | INFO     | aborting loop
[2025-06-04 05:14:34] 2025-06-04 09:14:17,114 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:14:34] 2025-06-04 09:14:17,114 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:14:34] 2025-06-04 09:14:17,128 | INFO     | all data control threads have been joined
[2025-06-04 05:14:34] 2025-06-04 09:14:17,782 | INFO     | all payload control threads have been joined
[2025-06-04 05:14:34] 2025-06-04 09:14:17,896 | INFO     | all job control threads have been joined
[2025-06-04 05:14:34] 2025-06-04 09:14:17,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:14:34] 2025-06-04 09:14:18,117 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:18,119 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:18,119 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:18,133 | INFO     | [data] control thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:18,301 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:18,769 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:18,788 | INFO     | [payload] control thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:18,900 | INFO     | [job] control thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:19,017 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:19,141 | INFO     | [job] validate thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:19,205 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:19,222 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:19,402 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:19,960 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:20,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:14:34] 2025-06-04 09:14:24,545 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:27,575 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:14:34] 2025-06-04 09:14:28,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:14:34] 2025-06-04 09:14:29,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139917104846656)>', '<ExcThread(monitor, started 139916461725440)>']
[2025-06-04 05:14:34] 2025-06-04 09:14:30,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:14:34] 2025-06-04 09:14:30,173 | INFO     | [monitor] control thread has ended
[2025-06-04 05:14:34] 2025-06-04 09:14:34,245 | INFO     | all workflow threads have been joined
[2025-06-04 05:14:34] 2025-06-04 09:14:34,245 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:14:34] 2025-06-04 09:14:34,245 | INFO     | traces error code: 0
[2025-06-04 05:14:34] 2025-06-04 09:14:34,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:14:34] 2025-06-04 09:14:34,392 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:14:34] 2025-06-04 09:14:34,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:14:34] 2025-06-04 09:14:34,396 [wrapper] pilotpid: 2305527
[2025-06-04 05:14:34] 2025-06-04 09:14:34,399 [wrapper] Pilot exit status: 0
[2025-06-04 05:14:34] 2025-06-04 09:14:34,408 [wrapper] pandaids: 6667666979
[2025-06-04 05:14:34] 2025-06-04 09:14:34,463 [wrapper] cleanup supervisor_pilot 2503522 2305528
[2025-06-04 05:14:34] 2025-06-04 09:14:34,465 [wrapper] Test setup, not cleaning
[2025-06-04 05:14:34] 2025-06-04 09:14:34,466 [wrapper] apfmon messages muted
[2025-06-04 05:14:34] 2025-06-04 09:14:34,469 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:14:34] 2025-06-04 09:14:34,471 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:14:34]  *** Error codes and diagnostics ***
[2025-06-04 05:14:34]     "exeErrorCode": 0,
[2025-06-04 05:14:34]     "exeErrorDiag": "",
[2025-06-04 05:14:34]     "pilotErrorCode": 0,
[2025-06-04 05:14:34]     "pilotErrorDiag": "",
[2025-06-04 05:14:34]  *** Listing of results directory ***
[2025-06-04 05:14:34] total 410128
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas    495897 May 27 17:39 pilot3.tar.gz
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas      5111 May 27 17:55 queuedata.json
[2025-06-04 05:14:34] -rwx------. 1 boincer umatlas     37140 May 27 17:58 runpilot2-wrapper.sh
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas       100 Jun  4 04:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:14:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 04:01 run_atlas
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas       105 Jun  4 04:01 job.xml
[2025-06-04 05:14:34] -rw-r--r--. 2 boincer umatlas 226388501 Jun  4 04:01 EVNT.44871834._002900.pool.root.1
[2025-06-04 05:14:34] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:01 start_atlas.sh
[2025-06-04 05:14:34] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 04:01 shared
[2025-06-04 05:14:34] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 04:01 input.tar.gz
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas         0 Jun  4 04:01 boinc_lockfile
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 04:01 pandaJob.out
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas    986745 Jun  4 04:01 agis_schedconf.cvmfs.json
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas   1603667 Jun  4 04:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:14:34] drwx------. 4 boincer umatlas      4096 Jun  4 04:01 pilot3
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas      6856 Jun  4 05:10 init_data.xml
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas       529 Jun  4 05:13 boinc_task_state.xml
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas 188273222 Jun  4 05:13 HITS.44871837._073983.pool.root.1
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas        95 Jun  4 05:13 pilot_heartbeat.json
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas      1041 Jun  4 05:14 memory_monitor_summary.json
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas    304099 Jun  4 05:14 log.44871837._073983.job.log.tgz.1
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas      7721 Jun  4 05:14 heartbeat.json
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas        27 Jun  4 05:14 wrapper_checkpoint.txt
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 05:14 boinc_mmap_file
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas      4548 Jun  4 05:14 pilotlog.txt
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas    432611 Jun  4 05:14 log.44871837._073983.job.log.1
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas       357 Jun  4 05:14 output.list
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas       620 Jun  4 05:14 runtime_log
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas    757760 Jun  4 05:14 result.tar.gz
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 05:14 runtime_log.err
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas       652 Jun  4 05:14 7kPKDmsUHe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnSSKDmJUfUFo.diag
[2025-06-04 05:14:34] -rw-r--r--. 1 boincer umatlas     21196 Jun  4 05:14 stderr.txt
[2025-06-04 05:14:34] HITS file was successfully produced:
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas 188273222 Jun  4 05:13 shared/HITS.pool.root.1
[2025-06-04 05:14:34]  *** Contents of shared directory: ***
[2025-06-04 05:14:34] total 406208
[2025-06-04 05:14:34] -rw-r--r--. 2 boincer umatlas 226388501 Jun  4 04:01 ATLAS.root_0
[2025-06-04 05:14:34] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:01 start_atlas.sh
[2025-06-04 05:14:34] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 04:01 input.tar.gz
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas 188273222 Jun  4 05:13 HITS.pool.root.1
[2025-06-04 05:14:34] -rw-------. 1 boincer umatlas    757760 Jun  4 05:14 result.tar.gz
05:14:36 (2301889): run_atlas exited; CPU time 29543.817614
05:14:36 (2301889): called boinc_finish(0)

</stderr_txt>
]]>

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