Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:38:24 (18988): wrapper (7.7.26015): starting
20:38:24 (18988): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 20:38:24] Arguments: --nthreads 8
[2025-06-04 20:38:24] Threads: 8
[2025-06-04 20:38:24] Checking for CVMFS
[2025-06-04 20:38:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:38:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:38:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:38:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:38:27] 2.11.2.0 17834 33597 88300 146791 3 158 20525611 25165825 3198 130560 0 18562283 99.805 20489373 2146 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 20:38:27] CVMFS is ok
[2025-06-04 20:38:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:38:28] Checking for apptainer binary...
[2025-06-04 20:38:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:38:28] Running /usr/bin/apptainer --version
[2025-06-04 20:38:28] apptainer version 1.3.2-1.el7
[2025-06-04 20:38:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:38:40] cg-vwn466.simple-grid.lan
[2025-06-04 20:38:40] apptainer works
[2025-06-04 20:38:40] Set ATHENA_PROC_NUMBER=8
[2025-06-04 20:38:40] Set ATHENA_CORE_NUMBER=8
[2025-06-04 20:38:40] Starting ATLAS job with PandaID=6678155338
[2025-06-04 20:38:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:06:49]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:06:49] 2025-06-04 22:06:22,821 | INFO     | monitor loop #847: job 0:6678155338 is in state 'finished'
[2025-06-05 00:06:49] 2025-06-04 22:06:22,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:06:49] 2025-06-04 22:06:25,326 | INFO     | monitor loop #848: job 0:6678155338 is in state 'finished'
[2025-06-05 00:06:49] 2025-06-04 22:06:25,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:06:49] 2025-06-04 22:06:27,833 | INFO     | monitor loop #849: job 0:6678155338 is in state 'finished'
[2025-06-05 00:06:49] 2025-06-04 22:06:27,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:06:49] 2025-06-04 22:06:28,561 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 00:06:49] 2025-06-04 22:06:28,562 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6678155338/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:06:49] 2025-06-04 22:06:28,562 | INFO     | extracted standard info from prmon json
[2025-06-05 00:06:49] 2025-06-04 22:06:28,563 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:06:49] 2025-06-04 22:06:28,563 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:06:49] 2025-06-04 22:06:28,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:06:49] 2025-06-04 22:06:28,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:06:49] 2025-06-04 22:06:28,567 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:06:49] 2025-06-04 22:06:28,568 | INFO     | sum of square deviations: 2593916542.0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,570 | INFO     | sum of deviations: -8624367514.000002
[2025-06-05 00:06:49] 2025-06-04 22:06:28,570 | INFO     | mean x: 1749068555.0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,570 | INFO     | mean y: 2512631.4433497535
[2025-06-05 00:06:49] 2025-06-04 22:06:28,571 | INFO     | -- intersect: 5817892494.77163
[2025-06-05 00:06:49] 2025-06-04 22:06:28,571 | INFO     | intersect: 5817892494.77163
[2025-06-05 00:06:49] 2025-06-04 22:06:28,571 | INFO     | chi2: 1.7553398237614317
[2025-06-05 00:06:49] 2025-06-04 22:06:28,571 | INFO     | sum of square deviations: 2406926989.5
[2025-06-05 00:06:49] 2025-06-04 22:06:28,573 | INFO     | sum of deviations: -8153153249.999995
[2025-06-05 00:06:49] 2025-06-04 22:06:28,573 | INFO     | mean x: 1749068402.5
[2025-06-05 00:06:49] 2025-06-04 22:06:28,573 | INFO     | mean y: 2513015.8282828284
[2025-06-05 00:06:49] 2025-06-04 22:06:28,573 | INFO     | -- intersect: 5927255557.88501
[2025-06-05 00:06:49] 2025-06-04 22:06:28,574 | INFO     | intersect: 5927255557.88501
[2025-06-05 00:06:49] 2025-06-04 22:06:28,574 | INFO     | chi2: 1.7549889040716884
[2025-06-05 00:06:49] 2025-06-04 22:06:28,574 | INFO     | current chi2=1.7549889040716884 (change=0.01999155291716418 %)
[2025-06-05 00:06:49] 2025-06-04 22:06:28,574 | INFO     | right removable region: 197
[2025-06-05 00:06:49] 2025-06-04 22:06:28,574 | INFO     | sum of square deviations: 2406926989.5
[2025-06-05 00:06:49] 2025-06-04 22:06:28,576 | INFO     | sum of deviations: -41044869675.99999
[2025-06-05 00:06:49] 2025-06-04 22:06:28,576 | INFO     | mean x: 1749068707.5
[2025-06-05 00:06:49] 2025-06-04 22:06:28,576 | INFO     | mean y: 2538787.3131313133
[2025-06-05 00:06:49] 2025-06-04 22:06:28,576 | INFO     | -- intersect: 29829075889.13877
[2025-06-05 00:06:49] 2025-06-04 22:06:28,576 | INFO     | intersect: 29829075889.13877
[2025-06-05 00:06:49] 2025-06-04 22:06:28,577 | INFO     | chi2: 0.18417884283784103
[2025-06-05 00:06:49] 2025-06-04 22:06:28,577 | INFO     | current chi2=0.18417884283784103 (change=89.50751071988026 %)
[2025-06-05 00:06:49] 2025-06-04 22:06:28,577 | INFO     | sum of square deviations: 2229146912.0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,578 | INFO     | sum of deviations: -37702269573.0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,578 | INFO     | mean x: 1749068860.0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,579 | INFO     | mean y: 2535885.5284974095
[2025-06-05 00:06:49] 2025-06-04 22:06:28,579 | INFO     | -- intersect: 29585092919.55309
[2025-06-05 00:06:49] 2025-06-04 22:06:28,579 | INFO     | intersect: 29585092919.55309
[2025-06-05 00:06:49] 2025-06-04 22:06:28,579 | INFO     | chi2: 0.1738782631128588
[2025-06-05 00:06:49] 2025-06-04 22:06:28,579 | INFO     | current chi2=0.1738782631128588 (change=5.592705202329505 %)
[2025-06-05 00:06:49] 2025-06-04 22:06:28,579 | INFO     | left removable region: 20
[2025-06-05 00:06:49] 2025-06-04 22:06:28,580 | INFO     | sum of square deviations: 1719429448.0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,581 | INFO     | sum of deviations: -23949348896.999996
[2025-06-05 00:06:49] 2025-06-04 22:06:28,581 | INFO     | mean x: 1749068982.0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,581 | INFO     | mean y: 2524820.378531073
[2025-06-05 00:06:49] 2025-06-04 22:06:28,581 | INFO     | -- intersect: 24364712721.46571
[2025-06-05 00:06:49] 2025-06-04 22:06:28,581 | INFO     | intersect: 24364712721.46571
[2025-06-05 00:06:49] 2025-06-04 22:06:28,581 | INFO     | chi2: 0.14466075614929935
[2025-06-05 00:06:49] 2025-06-04 22:06:28,581 | INFO     | -- intersect: 24364712721.46571
[2025-06-05 00:06:49] 2025-06-04 22:06:28,582 | INFO     | current memory leak: -13.93 B/s (using 177 data points, chi2=0.14)
[2025-06-05 00:06:49] 2025-06-04 22:06:28,582 | INFO     | ..............................
[2025-06-05 00:06:49] 2025-06-04 22:06:28,582 | INFO     | . Timing measurements:
[2025-06-05 00:06:49] 2025-06-04 22:06:28,582 | INFO     | . get job = 0 s
[2025-06-05 00:06:49] 2025-06-04 22:06:28,582 | INFO     | . initial setup = 2 s
[2025-06-05 00:06:49] 2025-06-04 22:06:28,583 | INFO     | . payload setup = 13 s
[2025-06-05 00:06:49] 2025-06-04 22:06:28,583 | INFO     | . stage-in = 0 s
[2025-06-05 00:06:49] 2025-06-04 22:06:28,583 | INFO     | . payload execution = 12392 s
[2025-06-05 00:06:49] 2025-06-04 22:06:28,583 | INFO     | . stage-out = 1 s
[2025-06-05 00:06:49] 2025-06-04 22:06:28,583 | INFO     | . log creation = 0 s
[2025-06-05 00:06:49] 2025-06-04 22:06:28,583 | INFO     | ..............................
[2025-06-05 00:06:49] 2025-06-04 22:06:28,690 | INFO     | 
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | job summary report
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | --------------------------------------------------
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | PanDA job id: 6678155338
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | task id: 45006595
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | errors: (none)
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | pilot state: finished 
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | transexitcode: 0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | exeerrorcode: 0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | exeerrordiag: 
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | exitcode: 0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,691 | INFO     | exitmsg: OK
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | cpuconsumptiontime: 47073 s
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | nevents: 400
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | neventsw: 0
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | pid: 31603
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | pgrp: 31603
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | corecount: 8
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | event service: False
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | sizes: {0: 2397171, 1: 2397370, 10: 2397576, 12: 2397604, 12410: 2426675, 12412: 2435800, 12427: 2435914}
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | --------------------------------------------------
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | 
[2025-06-05 00:06:49] 2025-06-04 22:06:28,692 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-05 00:06:49] 2025-06-04 22:06:28,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:06:49] 2025-06-04 22:06:28,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:06:49] 2025-06-04 22:06:28,754 | INFO     | job 6678155338 has completed (purged errors)
[2025-06-05 00:06:49] 2025-06-04 22:06:28,754 | INFO     | overall cleanup function is called
[2025-06-05 00:06:49] 2025-06-04 22:06:29,762 | INFO     | --- collectZombieJob: --- 10, [31603]
[2025-06-05 00:06:49] 2025-06-04 22:06:29,763 | INFO     | zombie collector waiting for pid 31603
[2025-06-05 00:06:49] 2025-06-04 22:06:29,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:06:49] 2025-06-04 22:06:29,763 | INFO     | collected zombie processes
[2025-06-05 00:06:49] 2025-06-04 22:06:29,763 | INFO     | will attempt to kill all subprocesses of pid=31603
[2025-06-05 00:06:49] 2025-06-04 22:06:29,856 | INFO     | process IDs to be killed: [31603] (in reverse order)
[2025-06-05 00:06:49] 2025-06-04 22:06:29,950 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:06:49] 2025-06-04 22:06:29,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:06:49] 2025-06-04 22:06:29,954 | INFO     | did not find any defunct processes belonging to 31603
[2025-06-05 00:06:49] 2025-06-04 22:06:29,957 | INFO     | did not find any defunct processes belonging to 31603
[2025-06-05 00:06:49] 2025-06-04 22:06:29,958 | INFO     | ready for new job
[2025-06-05 00:06:49] 2025-06-04 22:06:29,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:06:49] 2025-06-04 22:06:29,960 | INFO     | **************************************
[2025-06-05 00:06:49] 2025-06-04 22:06:29,960 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:06:49] 2025-06-04 22:06:29,960 | INFO     | **************************************
[2025-06-05 00:06:49] 2025-06-04 22:06:29,960 | INFO     | 
[2025-06-05 00:06:49] 2025-06-04 22:06:29,961 | INFO     | pilot is running in a VM
[2025-06-05 00:06:49] 2025-06-04 22:06:29,961 | INFO     | architecture information:
[2025-06-05 00:06:49] 2025-06-04 22:06:29,962 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:06:49] 2025-06-04 22:06:29,982 | INFO     | cat /etc/os-release:
[2025-06-05 00:06:49] NAME="CentOS Linux"
[2025-06-05 00:06:49] VERSION="7 (Core)"
[2025-06-05 00:06:49] ID="centos"
[2025-06-05 00:06:49] ID_LIKE="rhel fedora"
[2025-06-05 00:06:49] VERSION_ID="7"
[2025-06-05 00:06:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:06:49] ANSI_COLOR="0;31"
[2025-06-05 00:06:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:06:49] HOME_URL="https://www.centos.org/"
[2025-06-05 00:06:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:06:49] 
[2025-06-05 00:06:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:06:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:06:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:06:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:06:49] 
[2025-06-05 00:06:49] 2025-06-04 22:06:29,983 | INFO     | **************************************
[2025-06-05 00:06:49] 2025-06-04 22:06:30,486 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-05 00:06:49] 2025-06-04 22:06:30,513 | INFO     | sufficient remaining disk space (497528340480 B)
[2025-06-05 00:06:49] 2025-06-04 22:06:30,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:06:49] 2025-06-04 22:06:30,514 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:06:49] 2025-06-04 22:06:30,514 | INFO     | update_server=False
[2025-06-05 00:06:49] 2025-06-04 22:06:30,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:06:49] 2025-06-04 22:06:30,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:06:49] 2025-06-04 22:06:30,638 | INFO     | all payload control threads have been joined
[2025-06-05 00:06:49] 2025-06-04 22:06:31,092 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:06:49] 2025-06-04 22:06:31,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:06:49] 2025-06-04 22:06:31,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:06:49] 2025-06-04 22:06:31,206 | INFO     | all data control threads have been joined
[2025-06-05 00:06:49] 2025-06-04 22:06:31,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:06:49] 2025-06-04 22:06:31,346 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:06:49] 2025-06-04 22:06:31,347 | INFO     | aborting loop
[2025-06-05 00:06:49] 2025-06-04 22:06:31,520 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:31,521 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:31,583 | INFO     | all job control threads have been joined
[2025-06-05 00:06:49] 2025-06-04 22:06:31,639 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:31,643 | INFO     | [payload] control thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:31,714 | INFO     | [job] validate thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:31,845 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:31,911 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:31,984 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:32,212 | INFO     | [data] control thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:32,352 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:32,589 | INFO     | [job] control thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:32,868 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:32,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:06:49] 2025-06-04 22:06:32,999 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:33,284 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:36,886 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:41,301 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:06:49] 2025-06-04 22:06:42,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:06:49] 2025-06-04 22:06:43,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217773045568)>', '<ExcThread(monitor, started 140217117828864)>']
[2025-06-05 00:06:49] 2025-06-04 22:06:44,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:06:49] 2025-06-04 22:06:44,169 | INFO     | [monitor] control thread has ended
[2025-06-05 00:06:49] 2025-06-04 22:06:48,622 | INFO     | all workflow threads have been joined
[2025-06-05 00:06:49] 2025-06-04 22:06:48,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:06:49] 2025-06-04 22:06:48,623 | INFO     | traces error code: 0
[2025-06-05 00:06:49] 2025-06-04 22:06:48,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:06:49] 2025-06-04 22:06:48,820 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:06:49] 2025-06-04 22:06:48,827 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:06:49] 2025-06-04 22:06:48,845 [wrapper] pilotpid: 23038
[2025-06-05 00:06:49] 2025-06-04 22:06:48,856 [wrapper] Pilot exit status: 0
[2025-06-05 00:06:49] 2025-06-04 22:06:48,915 [wrapper] pandaids: 6678155338
[2025-06-05 00:06:49] 2025-06-04 22:06:48,969 [wrapper] cleanup supervisor_pilot 28359 23039
[2025-06-05 00:06:49] 2025-06-04 22:06:48,976 [wrapper] Test setup, not cleaning
[2025-06-05 00:06:49] 2025-06-04 22:06:48,991 [wrapper] apfmon messages muted
[2025-06-05 00:06:49] 2025-06-04 22:06:48,999 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:06:49] 2025-06-04 22:06:49,005 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:06:49]  *** Error codes and diagnostics ***
[2025-06-05 00:06:49]     "exeErrorCode": 0,
[2025-06-05 00:06:49]     "exeErrorDiag": "",
[2025-06-05 00:06:49]     "pilotErrorCode": 0,
[2025-06-05 00:06:49]     "pilotErrorDiag": "",
[2025-06-05 00:06:49]  *** Listing of results directory ***
[2025-06-05 00:06:49] total 390296
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:22 pilot3.tar.gz
[2025-06-05 00:06:49] -rwx------. 1 boinc boinc     37140 Jun  4 01:30 runpilot2-wrapper.sh
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:30 queuedata.json
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc       100 Jun  4 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:06:49] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 20:38 run_atlas
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc       105 Jun  4 20:38 job.xml
[2025-06-05 00:06:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:38 start_atlas.sh
[2025-06-05 00:06:49] drwxrwx--x. 2 boinc boinc        68 Jun  4 20:38 shared
[2025-06-05 00:06:49] -rw-r--r--. 2 boinc boinc    508880 Jun  4 20:38 input.tar.gz
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc      6392 Jun  4 20:38 init_data.xml
[2025-06-05 00:06:49] -rw-r--r--. 2 boinc boinc 213078038 Jun  4 20:38 EVNT.45006593._001927.pool.root.1
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc         0 Jun  4 20:38 boinc_lockfile
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc      2525 Jun  4 20:38 pandaJob.out
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc    990984 Jun  4 20:38 agis_schedconf.cvmfs.json
[2025-06-05 00:06:49] drwx------. 4 boinc boinc      4096 Jun  4 20:39 pilot3
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc 179830955 Jun  5 00:05 HITS.45006595._048006.pool.root.1
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc       530 Jun  5 00:05 boinc_task_state.xml
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc        95 Jun  5 00:05 pilot_heartbeat.json
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc      1018 Jun  5 00:06 memory_monitor_summary.json
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc   1598969 Jun  5 00:06 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc    382545 Jun  5 00:06 log.45006595._048006.job.log.tgz.1
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc      7705 Jun  5 00:06 heartbeat.json
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc      8192 Jun  5 00:06 boinc_mmap_file
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc        28 Jun  5 00:06 wrapper_checkpoint.txt
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc      4488 Jun  5 00:06 pilotlog.txt
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc   1080825 Jun  5 00:06 log.45006595._048006.job.log.1
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc       357 Jun  5 00:06 output.list
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc       620 Jun  5 00:06 runtime_log
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc   1484800 Jun  5 00:06 result.tar.gz
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc      8659 Jun  5 00:06 runtime_log.err
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc       657 Jun  5 00:06 7M8LDm4Gqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIVmKDmHtkoEm.diag
[2025-06-05 00:06:49] -rw-r--r--. 1 boinc boinc     20688 Jun  5 00:06 stderr.txt
[2025-06-05 00:06:49] HITS file was successfully produced:
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc 179830955 Jun  5 00:05 shared/HITS.pool.root.1
[2025-06-05 00:06:49]  *** Contents of shared directory: ***
[2025-06-05 00:06:49] total 385676
[2025-06-05 00:06:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:38 start_atlas.sh
[2025-06-05 00:06:49] -rw-r--r--. 2 boinc boinc    508880 Jun  4 20:38 input.tar.gz
[2025-06-05 00:06:49] -rw-r--r--. 2 boinc boinc 213078038 Jun  4 20:38 ATLAS.root_0
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc 179830955 Jun  5 00:05 HITS.pool.root.1
[2025-06-05 00:06:49] -rw-------. 1 boinc boinc   1484800 Jun  5 00:06 result.tar.gz
00:06:51 (18988): run_atlas exited; CPU time 47215.584257
00:06:51 (18988): called boinc_finish(0)

</stderr_txt>
]]>

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