Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:10:11 (22984): wrapper (7.7.26015): starting
17:10:11 (22984): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:10:11] Arguments: --nthreads 8
[2025-06-04 17:10:11] Threads: 8
[2025-06-04 17:10:11] Checking for CVMFS
[2025-06-04 17:10:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:10:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:10:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:10:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:10:13] 2.11.2.0 27863 33551 93644 146783 2 16 20586619 25165825 4297 130560 0 16355313 99.767 19490650 4722 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 17:10:13] CVMFS is ok
[2025-06-04 17:10:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:10:13] Checking for apptainer binary...
[2025-06-04 17:10:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:10:13] Running /usr/bin/apptainer --version
[2025-06-04 17:10:13] apptainer version 1.3.2-1.el7
[2025-06-04 17:10:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:10:23] cg-vwn495.simple-grid.lan
[2025-06-04 17:10:23] apptainer works
[2025-06-04 17:10:23] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:10:23] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:10:23] Starting ATLAS job with PandaID=6678286257
[2025-06-04 17:10:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:45:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:45:36] 2025-06-04 18:45:19,543 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:45:36] 2025-06-04 18:45:19,543 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:45:36] 2025-06-04 18:45:19,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:45:36] 2025-06-04 18:45:19,548 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:45:36] 2025-06-04 18:45:19,549 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,550 | INFO     | sum of deviations: 53644255738.500015
[2025-06-04 20:45:36] 2025-06-04 18:45:19,551 | INFO     | mean x: 1749056601.5
[2025-06-04 20:45:36] 2025-06-04 18:45:19,551 | INFO     | mean y: 2439617.065
[2025-06-04 20:45:36] 2025-06-04 18:45:19,551 | INFO     | -- intersect: -37821741528.438255
[2025-06-04 20:45:36] 2025-06-04 18:45:19,551 | INFO     | intersect: -37821741528.438255
[2025-06-04 20:45:36] 2025-06-04 18:45:19,551 | INFO     | chi2: 7.899134398099956
[2025-06-04 20:45:36] 2025-06-04 18:45:19,552 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,554 | INFO     | sum of deviations: 66206891741.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,554 | INFO     | mean x: 1749056449.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,554 | INFO     | mean y: 2449940.6153846155
[2025-06-04 20:45:36] 2025-06-04 18:45:19,554 | INFO     | -- intersect: -50363402496.18032
[2025-06-04 20:45:36] 2025-06-04 18:45:19,554 | INFO     | intersect: -50363402496.18032
[2025-06-04 20:45:36] 2025-06-04 18:45:19,555 | INFO     | chi2: 7.145880659846096
[2025-06-04 20:45:36] 2025-06-04 18:45:19,555 | INFO     | current chi2=7.145880659846096 (change=9.535902293737983 %)
[2025-06-04 20:45:36] 2025-06-04 18:45:19,555 | INFO     | right removable region: 194
[2025-06-04 20:45:36] 2025-06-04 18:45:19,556 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,557 | INFO     | sum of deviations: -18170477907.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,557 | INFO     | mean x: 1749056754.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,557 | INFO     | mean y: 2499951.9487179485
[2025-06-04 20:45:36] 2025-06-04 18:45:19,557 | INFO     | -- intersect: 13825407877.267645
[2025-06-04 20:45:36] 2025-06-04 18:45:19,557 | INFO     | intersect: 13825407877.267645
[2025-06-04 20:45:36] 2025-06-04 18:45:19,558 | INFO     | chi2: 2.5457034247648904
[2025-06-04 20:45:36] 2025-06-04 18:45:19,558 | INFO     | current chi2=2.5457034247648904 (change=67.77237483923264 %)
[2025-06-04 20:45:36] 2025-06-04 18:45:19,558 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 20:45:36] 2025-06-04 18:45:19,560 | INFO     | sum of deviations: -52398014789.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,560 | INFO     | mean x: 1749056906.5
[2025-06-04 20:45:36] 2025-06-04 18:45:19,560 | INFO     | mean y: 2530015.6315789474
[2025-06-04 20:45:36] 2025-06-04 18:45:19,560 | INFO     | -- intersect: 43094026492.50893
[2025-06-04 20:45:36] 2025-06-04 18:45:19,560 | INFO     | intersect: 43094026492.50893
[2025-06-04 20:45:36] 2025-06-04 18:45:19,560 | INFO     | chi2: 1.0828951194110465
[2025-06-04 20:45:36] 2025-06-04 18:45:19,561 | INFO     | current chi2=1.0828951194110465 (change=57.46185086304554 %)
[2025-06-04 20:45:36] 2025-06-04 18:45:19,561 | INFO     | sum of square deviations: 1963274020.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,562 | INFO     | sum of deviations: -54076426373.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,562 | INFO     | mean x: 1749057059.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,562 | INFO     | mean y: 2531549.8756756755
[2025-06-04 20:45:36] 2025-06-04 18:45:19,563 | INFO     | -- intersect: 48178565210.82608
[2025-06-04 20:45:36] 2025-06-04 18:45:19,563 | INFO     | intersect: 48178565210.82608
[2025-06-04 20:45:36] 2025-06-04 18:45:19,563 | INFO     | chi2: 1.0520420060426268
[2025-06-04 20:45:36] 2025-06-04 18:45:19,563 | INFO     | current chi2=1.0520420060426268 (change=2.8491321842137256 %)
[2025-06-04 20:45:36] 2025-06-04 18:45:19,563 | INFO     | left removable region: 30
[2025-06-04 20:45:36] 2025-06-04 18:45:19,564 | INFO     | sum of square deviations: 1367709365.0
[2025-06-04 20:45:36] 2025-06-04 18:45:19,565 | INFO     | sum of deviations: -23630441689.999996
[2025-06-04 20:45:36] 2025-06-04 18:45:19,565 | INFO     | mean x: 1749057333.5
[2025-06-04 20:45:36] 2025-06-04 18:45:19,565 | INFO     | mean y: 2527625.9146341463
[2025-06-04 20:45:36] 2025-06-04 18:45:19,565 | INFO     | -- intersect: 30221665104.54017
[2025-06-04 20:45:36] 2025-06-04 18:45:19,565 | INFO     | intersect: 30221665104.54017
[2025-06-04 20:45:36] 2025-06-04 18:45:19,565 | INFO     | chi2: 0.15184026488918614
[2025-06-04 20:45:36] 2025-06-04 18:45:19,566 | INFO     | -- intersect: 30221665104.54017
[2025-06-04 20:45:36] 2025-06-04 18:45:19,566 | INFO     | current memory leak: -17.28 B/s (using 164 data points, chi2=0.15)
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | ..............................
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | . Timing measurements:
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | . get job = 0 s
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | . initial setup = 6 s
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | . payload setup = 165 s
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | . stage-in = 0 s
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | . payload execution = 12343 s
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | . stage-out = 1 s
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | . log creation = 0 s
[2025-06-04 20:45:36] 2025-06-04 18:45:19,567 | INFO     | ..............................
[2025-06-04 20:45:36] 2025-06-04 18:45:20,005 | INFO     | 
[2025-06-04 20:45:36] 2025-06-04 18:45:20,006 | INFO     | job summary report
[2025-06-04 20:45:36] 2025-06-04 18:45:20,006 | INFO     | --------------------------------------------------
[2025-06-04 20:45:36] 2025-06-04 18:45:20,006 | INFO     | PanDA job id: 6678286257
[2025-06-04 20:45:36] 2025-06-04 18:45:20,006 | INFO     | task id: 45006595
[2025-06-04 20:45:36] 2025-06-04 18:45:20,006 | INFO     | errors: (none)
[2025-06-04 20:45:36] 2025-06-04 18:45:20,006 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:45:36] 2025-06-04 18:45:20,006 | INFO     | pilot state: finished 
[2025-06-04 20:45:36] 2025-06-04 18:45:20,006 | INFO     | transexitcode: 0
[2025-06-04 20:45:36] 2025-06-04 18:45:20,006 | INFO     | exeerrorcode: 0
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | exeerrordiag: 
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | exitcode: 0
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | exitmsg: OK
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | cpuconsumptiontime: 45316 s
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | nevents: 400
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | neventsw: 0
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | pid: 5471
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | pgrp: 5471
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | corecount: 8
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | event service: False
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | sizes: {0: 2396514, 1: 2397371, 2: 2397371, 12: 2397399, 23: 2397427, 34: 2397455, 45: 2397611, 55: 2397639, 66: 2397667, 77: 2397695, 88: 2398265, 98: 2398265, 12
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | --------------------------------------------------
[2025-06-04 20:45:36] 2025-06-04 18:45:20,007 | INFO     | 
[2025-06-04 20:45:36] 2025-06-04 18:45:20,008 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 20:45:36] 2025-06-04 18:45:20,097 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,098 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,098 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,099 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,099 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,099 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,099 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:45:36] 2025-06-04 18:45:20,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,099 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:45:36] 2025-06-04 18:45:20,099 | INFO     | job 6678286257 has completed (purged errors)
[2025-06-04 20:45:36] 2025-06-04 18:45:20,100 | INFO     | overall cleanup function is called
[2025-06-04 20:45:36] 2025-06-04 18:45:21,108 | INFO     | --- collectZombieJob: --- 10, [5471]
[2025-06-04 20:45:36] 2025-06-04 18:45:21,109 | INFO     | zombie collector waiting for pid 5471
[2025-06-04 20:45:36] 2025-06-04 18:45:21,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:45:36] 2025-06-04 18:45:21,109 | INFO     | collected zombie processes
[2025-06-04 20:45:36] 2025-06-04 18:45:21,109 | INFO     | will attempt to kill all subprocesses of pid=5471
[2025-06-04 20:45:36] 2025-06-04 18:45:21,217 | INFO     | process IDs to be killed: [5471] (in reverse order)
[2025-06-04 20:45:36] 2025-06-04 18:45:21,414 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:45:36] 2025-06-04 18:45:21,415 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:45:36] 2025-06-04 18:45:21,418 | INFO     | did not find any defunct processes belonging to 5471
[2025-06-04 20:45:36] 2025-06-04 18:45:21,420 | INFO     | did not find any defunct processes belonging to 5471
[2025-06-04 20:45:36] 2025-06-04 18:45:21,421 | INFO     | ready for new job
[2025-06-04 20:45:36] 2025-06-04 18:45:21,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:45:36] 2025-06-04 18:45:21,423 | INFO     | **************************************
[2025-06-04 20:45:36] 2025-06-04 18:45:21,423 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:45:36] 2025-06-04 18:45:21,423 | INFO     | **************************************
[2025-06-04 20:45:36] 2025-06-04 18:45:21,423 | INFO     | 
[2025-06-04 20:45:36] 2025-06-04 18:45:21,424 | INFO     | pilot is running in a VM
[2025-06-04 20:45:36] 2025-06-04 18:45:21,424 | INFO     | architecture information:
[2025-06-04 20:45:36] 2025-06-04 18:45:21,425 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:45:36] 2025-06-04 18:45:21,443 | INFO     | cat /etc/os-release:
[2025-06-04 20:45:36] NAME="CentOS Linux"
[2025-06-04 20:45:36] VERSION="7 (Core)"
[2025-06-04 20:45:36] ID="centos"
[2025-06-04 20:45:36] ID_LIKE="rhel fedora"
[2025-06-04 20:45:36] VERSION_ID="7"
[2025-06-04 20:45:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:45:36] ANSI_COLOR="0;31"
[2025-06-04 20:45:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:45:36] HOME_URL="https://www.centos.org/"
[2025-06-04 20:45:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:45:36] 
[2025-06-04 20:45:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:45:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:45:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:45:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:45:36] 
[2025-06-04 20:45:36] 2025-06-04 18:45:21,443 | INFO     | **************************************
[2025-06-04 20:45:36] 2025-06-04 18:45:21,947 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 20:45:36] 2025-06-04 18:45:22,002 | INFO     | sufficient remaining disk space (496840474624 B)
[2025-06-04 20:45:36] 2025-06-04 18:45:22,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:45:36] 2025-06-04 18:45:22,003 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:45:36] 2025-06-04 18:45:22,003 | INFO     | update_server=False
[2025-06-04 20:45:36] 2025-06-04 18:45:22,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:45:36] 2025-06-04 18:45:22,003 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:45:36] 2025-06-04 18:45:22,004 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:45:36] 2025-06-04 18:45:22,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:45:36] 2025-06-04 18:45:22,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:45:36] 2025-06-04 18:45:22,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:45:36] 2025-06-04 18:45:22,322 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 20:45:36] 2025-06-04 18:45:22,323 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 20:45:36] 2025-06-04 18:45:22,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:45:36] 2025-06-04 18:45:22,323 | INFO     | will abort loop
[2025-06-04 20:45:36] 2025-06-04 18:45:22,719 | INFO     | all payload control threads have been joined
[2025-06-04 20:45:36] 2025-06-04 18:45:23,008 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:23,051 | INFO     | all data control threads have been joined
[2025-06-04 20:45:36] 2025-06-04 18:45:23,167 | INFO     | [job] validate thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:23,229 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:23,287 | INFO     | all job control threads have been joined
[2025-06-04 20:45:36] 2025-06-04 18:45:23,329 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:23,357 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:23,392 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:23,692 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:23,726 | INFO     | [payload] control thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:23,912 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:24,012 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:24,019 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:24,080 | INFO     | [data] control thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:24,283 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:24,293 | INFO     | [job] control thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:24,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:45:36] 2025-06-04 18:45:24,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:45:36] 2025-06-04 18:45:25,707 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:28,842 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:45:36] 2025-06-04 18:45:30,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732290930496)>', '<ExcThread(monitor, started 139731719415552)>']
[2025-06-04 20:45:36] 2025-06-04 18:45:31,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:45:36] 2025-06-04 18:45:31,050 | INFO     | [monitor] control thread has ended
[2025-06-04 20:45:36] 2025-06-04 18:45:35,767 | INFO     | all workflow threads have been joined
[2025-06-04 20:45:36] 2025-06-04 18:45:35,768 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:45:36] 2025-06-04 18:45:35,768 | INFO     | traces error code: 0
[2025-06-04 20:45:36] 2025-06-04 18:45:35,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:45:36] 2025-06-04 18:45:36,035 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:45:36] 2025-06-04 18:45:36,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:45:36] 2025-06-04 18:45:36,096 [wrapper] pilotpid: 29283
[2025-06-04 20:45:36] 2025-06-04 18:45:36,138 [wrapper] Pilot exit status: 0
[2025-06-04 20:45:36] 2025-06-04 18:45:36,159 [wrapper] pandaids: 6678286257
[2025-06-04 20:45:36] 2025-06-04 18:45:36,300 [wrapper] cleanup supervisor_pilot  5161 29284
[2025-06-04 20:45:36] 2025-06-04 18:45:36,313 [wrapper] Test setup, not cleaning
[2025-06-04 20:45:36] 2025-06-04 18:45:36,317 [wrapper] apfmon messages muted
[2025-06-04 20:45:36] 2025-06-04 18:45:36,321 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:45:36] 2025-06-04 18:45:36,324 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:45:36]  *** Error codes and diagnostics ***
[2025-06-04 20:45:36]     "exeErrorCode": 0,
[2025-06-04 20:45:36]     "exeErrorDiag": "",
[2025-06-04 20:45:36]     "pilotErrorCode": 0,
[2025-06-04 20:45:36]     "pilotErrorDiag": "",
[2025-06-04 20:45:36]  *** Listing of results directory ***
[2025-06-04 20:45:36] total 391064
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:04 queuedata.json
[2025-06-04 20:45:36] -rwx------. 1 boinc boinc     37140 Jun  4 05:05 runpilot2-wrapper.sh
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc       100 Jun  4 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:45:36] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 17:10 run_atlas
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc       105 Jun  4 17:10 job.xml
[2025-06-04 20:45:36] -rw-r--r--. 2 boinc boinc 213250004 Jun  4 17:10 EVNT.45006593._002051.pool.root.1
[2025-06-04 20:45:36] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:10 start_atlas.sh
[2025-06-04 20:45:36] drwxrwx--x. 2 boinc boinc        68 Jun  4 17:10 shared
[2025-06-04 20:45:36] -rw-r--r--. 2 boinc boinc    508880 Jun  4 17:10 input.tar.gz
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc      6392 Jun  4 17:10 init_data.xml
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc         0 Jun  4 17:10 boinc_lockfile
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc      2525 Jun  4 17:10 pandaJob.out
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc    987207 Jun  4 17:13 agis_schedconf.cvmfs.json
[2025-06-04 20:45:36] drwx------. 4 boinc boinc      4096 Jun  4 17:13 pilot3
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc 180470148 Jun  4 20:44 HITS.45006595._051185.pool.root.1
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc       531 Jun  4 20:44 boinc_task_state.xml
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc      1015 Jun  4 20:45 memory_monitor_summary.json
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc   1598969 Jun  4 20:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc    364584 Jun  4 20:45 log.45006595._051185.job.log.tgz.1
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc      8192 Jun  4 20:45 boinc_mmap_file
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc        28 Jun  4 20:45 wrapper_checkpoint.txt
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc        95 Jun  4 20:45 pilot_heartbeat.json
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc      7696 Jun  4 20:45 heartbeat.json
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc      4726 Jun  4 20:45 pilotlog.txt
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc   1086998 Jun  4 20:45 log.45006595._051185.job.log.1
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc       357 Jun  4 20:45 output.list
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc       620 Jun  4 20:45 runtime_log
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc   1474560 Jun  4 20:45 result.tar.gz
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc       657 Jun  4 20:45 x5xKDmNctg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVzmKDmORZJUm.diag
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc      8673 Jun  4 20:45 runtime_log.err
[2025-06-04 20:45:36] -rw-r--r--. 1 boinc boinc     20518 Jun  4 20:45 stderr.txt
[2025-06-04 20:45:36] HITS file was successfully produced:
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc 180470148 Jun  4 20:44 shared/HITS.pool.root.1
[2025-06-04 20:45:36]  *** Contents of shared directory: ***
[2025-06-04 20:45:36] total 386452
[2025-06-04 20:45:36] -rw-r--r--. 2 boinc boinc 213250004 Jun  4 17:10 ATLAS.root_0
[2025-06-04 20:45:36] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:10 start_atlas.sh
[2025-06-04 20:45:36] -rw-r--r--. 2 boinc boinc    508880 Jun  4 17:10 input.tar.gz
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc 180470148 Jun  4 20:44 HITS.pool.root.1
[2025-06-04 20:45:36] -rw-------. 1 boinc boinc   1474560 Jun  4 20:45 result.tar.gz
20:45:37 (22984): run_atlas exited; CPU time 45479.315429
20:45:37 (22984): called boinc_finish(0)

</stderr_txt>
]]>

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