Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:50:55 (16456): wrapper (7.7.26015): starting
03:50:55 (16456): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 03:50:55] Arguments: --nthreads 12
[2025-06-04 03:50:55] Threads: 12
[2025-06-04 03:50:55] Checking for CVMFS
[2025-06-04 03:50:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:50:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:50:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:50:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:50:56] 2.11.2.0 2984 35358 87104 146772 0 56 16918488 20275201 1 130560 0 15836032 99.983 6375661 7770 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 03:50:56] CVMFS is ok
[2025-06-04 03:50:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:50:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:50:56] Further information can be found at the LHC@home message board.
[2025-06-04 03:50:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:50:56] Checking for apptainer binary...
[2025-06-04 03:50:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:50:56] Running /usr/bin/apptainer --version
[2025-06-04 03:50:56] apptainer version 1.3.2-1.el7
[2025-06-04 03:50:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:50:57] c-205-26.aglt2.org
[2025-06-04 03:50:57] apptainer works
[2025-06-04 03:50:57] Set ATHENA_PROC_NUMBER=12
[2025-06-04 03:50:57] Set ATHENA_CORE_NUMBER=12
[2025-06-04 03:50:57] Starting ATLAS job with PandaID=6678286374
[2025-06-04 03:50:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:58:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:58:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 04:58:37]  is_altstaged=None
[2025-06-04 04:58:37]  is_tar=False
[2025-06-04 04:58:37]  lfn=log.45006595._051302.job.log.tgz.1
[2025-06-04 04:58:37]  mtime=0
[2025-06-04 04:58:37]  protocol_id=None
[2025-06-04 04:58:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 04:58:37]  replicas=None
[2025-06-04 04:58:37]  scope=mc23_13p6TeV
[2025-06-04 04:58:37]  status=None
[2025-06-04 04:58:37]  status_code=0
[2025-06-04 04:58:37]  storage_token=
[2025-06-04 04:58:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678286374/log.45006595._051302.job.log.tgz.1
[2025-06-04 04:58:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/93/log.45006595._051302.job.log.tgz.1
[2025-06-04 04:58:37]  workdir=None
[2025-06-04 04:58:37] ]
[2025-06-04 04:58:37] 2025-06-04 08:58:10,833 | INFO     | transferring file log.45006595._051302.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678286374/log.45006595._051302.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 04:58:37] 2025-06-04 08:58:10,833 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678286374/log.45006595._051302.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._051302.job
[2025-06-04 04:58:37] 2025-06-04 08:58:10,854 | INFO     | adding to output.list: log.45006595._051302.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/93/log.45006595._051302.job.log.tg
[2025-06-04 04:58:37] 2025-06-04 08:58:10,855 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 04:58:37] 2025-06-04 08:58:10,855 | INFO     | summary of transferred files:
[2025-06-04 04:58:37] 2025-06-04 08:58:10,856 | INFO     |  -- lfn=log.45006595._051302.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 04:58:37] 2025-06-04 08:58:10,856 | INFO     | stage-out finished correctly
[2025-06-04 04:58:37] 2025-06-04 08:58:11,014 | INFO     | number of running child processes to parent process 26521: 1
[2025-06-04 04:58:37] 2025-06-04 08:58:11,014 | INFO     | maximum number of monitored processes: 6
[2025-06-04 04:58:37] 2025-06-04 08:58:11,040 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 04:58:37] 2025-06-04 08:58:12,230 | INFO     | job 6678286374 has state=finished
[2025-06-04 04:58:37] 2025-06-04 08:58:12,230 | INFO     | preparing for final server update for job 6678286374 in state='finished'
[2025-06-04 04:58:37] 2025-06-04 08:58:12,231 | INFO     | this job has now completed (state=finished)
[2025-06-04 04:58:37] 2025-06-04 08:58:12,231 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 04:58:37] 2025-06-04 08:58:12,231 | INFO     | log transfer has been attempted: DONE
[2025-06-04 04:58:37] 2025-06-04 08:58:12,231 | INFO     | job 6678286374 has finished - writing final server update
[2025-06-04 04:58:37] 2025-06-04 08:58:12,232 | INFO     | total number of processed events: 400 (read)
[2025-06-04 04:58:37] 2025-06-04 08:58:12,233 | INFO     | executing command: lscpu
[2025-06-04 04:58:37] 2025-06-04 08:58:12,259 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 04:58:37] 2025-06-04 08:58:13,517 | INFO     | monitor loop #300: job 0:6678286374 is in state 'finished'
[2025-06-04 04:58:37] 2025-06-04 08:58:13,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:58:37] 2025-06-04 08:58:16,020 | INFO     | monitor loop #301: job 0:6678286374 is in state 'finished'
[2025-06-04 04:58:37] 2025-06-04 08:58:16,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:58:37] 2025-06-04 08:58:16,898 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 04:58:37] 2025-06-04 08:58:16,899 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286374/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:58:37] 2025-06-04 08:58:16,900 | INFO     | extracted standard info from prmon json
[2025-06-04 04:58:37] 2025-06-04 08:58:16,900 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:58:37] 2025-06-04 08:58:16,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:58:37] 2025-06-04 08:58:16,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:58:37] 2025-06-04 08:58:16,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:58:37] 2025-06-04 08:58:16,903 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:58:37] 2025-06-04 08:58:16,903 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 04:58:37] 2025-06-04 08:58:16,903 | INFO     | sum of deviations: -5563542088.000002
[2025-06-04 04:58:37] 2025-06-04 08:58:16,903 | INFO     | mean x: 1749025576.0
[2025-06-04 04:58:37] 2025-06-04 08:58:16,904 | INFO     | mean y: 2751348.3559322036
[2025-06-04 04:58:37] 2025-06-04 08:58:16,904 | INFO     | -- intersect: 152843043255.7155
[2025-06-04 04:58:37] 2025-06-04 08:58:16,904 | INFO     | intersect: 152843043255.7155
[2025-06-04 04:58:37] 2025-06-04 08:58:16,904 | INFO     | chi2: 0.04970164918981112
[2025-06-04 04:58:37] 2025-06-04 08:58:16,904 | INFO     | -- intersect: 152843043255.7155
[2025-06-04 04:58:37] 2025-06-04 08:58:16,905 | INFO     | current memory leak: -87.39 B/s (using 59 data points, chi2=0.05)
[2025-06-04 04:58:37] 2025-06-04 08:58:16,905 | INFO     | ..............................
[2025-06-04 04:58:37] 2025-06-04 08:58:16,905 | INFO     | . Timing measurements:
[2025-06-04 04:58:37] 2025-06-04 08:58:16,906 | INFO     | . get job = 0 s
[2025-06-04 04:58:37] 2025-06-04 08:58:16,906 | INFO     | . initial setup = 2 s
[2025-06-04 04:58:37] 2025-06-04 08:58:16,906 | INFO     | . payload setup = 9 s
[2025-06-04 04:58:37] 2025-06-04 08:58:16,906 | INFO     | . stage-in = 0 s
[2025-06-04 04:58:37] 2025-06-04 08:58:16,906 | INFO     | . payload execution = 3990 s
[2025-06-04 04:58:37] 2025-06-04 08:58:16,906 | INFO     | . stage-out = 0 s
[2025-06-04 04:58:37] 2025-06-04 08:58:16,906 | INFO     | . log creation = 0 s
[2025-06-04 04:58:37] 2025-06-04 08:58:16,906 | INFO     | ..............................
[2025-06-04 04:58:37] 2025-06-04 08:58:17,064 | INFO     | 
[2025-06-04 04:58:37] 2025-06-04 08:58:17,064 | INFO     | job summary report
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | --------------------------------------------------
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | PanDA job id: 6678286374
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | task id: 45006595
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | errors: (none)
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | pilot state: finished 
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | transexitcode: 0
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | exeerrorcode: 0
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | exeerrordiag: 
[2025-06-04 04:58:37] 2025-06-04 08:58:17,065 | INFO     | exitcode: 0
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | exitmsg: OK
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | cpuconsumptiontime: 43032 s
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | nevents: 400
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | neventsw: 0
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | pid: 26521
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | pgrp: 26521
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | corecount: 12
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | event service: False
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 4003: 2431154, 4004: 2440279, 4010: 2440393}
[2025-06-04 04:58:37] 2025-06-04 08:58:17,066 | INFO     | --------------------------------------------------
[2025-06-04 04:58:37] 2025-06-04 08:58:17,067 | INFO     | 
[2025-06-04 04:58:37] 2025-06-04 08:58:17,067 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 04:58:37] 2025-06-04 08:58:17,088 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,088 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,088 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,088 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,089 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,089 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,089 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:58:37] 2025-06-04 08:58:17,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:58:37] 2025-06-04 08:58:17,091 | INFO     | job 6678286374 has completed (purged errors)
[2025-06-04 04:58:37] 2025-06-04 08:58:17,092 | INFO     | overall cleanup function is called
[2025-06-04 04:58:37] 2025-06-04 08:58:18,100 | INFO     | --- collectZombieJob: --- 10, [26521]
[2025-06-04 04:58:37] 2025-06-04 08:58:18,100 | INFO     | zombie collector waiting for pid 26521
[2025-06-04 04:58:37] 2025-06-04 08:58:18,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:58:37] 2025-06-04 08:58:18,101 | INFO     | collected zombie processes
[2025-06-04 04:58:37] 2025-06-04 08:58:18,101 | INFO     | will attempt to kill all subprocesses of pid=26521
[2025-06-04 04:58:37] 2025-06-04 08:58:18,191 | INFO     | process IDs to be killed: [26521] (in reverse order)
[2025-06-04 04:58:37] 2025-06-04 08:58:18,237 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:58:37] 2025-06-04 08:58:18,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:58:37] 2025-06-04 08:58:18,241 | INFO     | did not find any defunct processes belonging to 26521
[2025-06-04 04:58:37] 2025-06-04 08:58:18,244 | INFO     | did not find any defunct processes belonging to 26521
[2025-06-04 04:58:37] 2025-06-04 08:58:18,244 | INFO     | ready for new job
[2025-06-04 04:58:37] 2025-06-04 08:58:18,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:58:37] 2025-06-04 08:58:18,246 | INFO     | **************************************
[2025-06-04 04:58:37] 2025-06-04 08:58:18,246 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:58:37] 2025-06-04 08:58:18,246 | INFO     | **************************************
[2025-06-04 04:58:37] 2025-06-04 08:58:18,246 | INFO     | 
[2025-06-04 04:58:37] 2025-06-04 08:58:18,247 | INFO     | architecture information:
[2025-06-04 04:58:37] 2025-06-04 08:58:18,247 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:58:37] 2025-06-04 08:58:18,261 | INFO     | cat /etc/os-release:
[2025-06-04 04:58:37] NAME="CentOS Linux"
[2025-06-04 04:58:37] VERSION="7 (Core)"
[2025-06-04 04:58:37] ID="centos"
[2025-06-04 04:58:37] ID_LIKE="rhel fedora"
[2025-06-04 04:58:37] VERSION_ID="7"
[2025-06-04 04:58:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:58:37] ANSI_COLOR="0;31"
[2025-06-04 04:58:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:58:37] HOME_URL="https://www.centos.org/"
[2025-06-04 04:58:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:58:37] 
[2025-06-04 04:58:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:58:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:58:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:58:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:58:37] 
[2025-06-04 04:58:37] 2025-06-04 08:58:18,262 | INFO     | **************************************
[2025-06-04 04:58:37] 2025-06-04 08:58:18,765 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 04:58:37] 2025-06-04 08:58:18,781 | INFO     | sufficient remaining disk space (29415702528 B)
[2025-06-04 04:58:37] 2025-06-04 08:58:18,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:58:37] 2025-06-04 08:58:18,781 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:58:37] 2025-06-04 08:58:18,781 | INFO     | update_server=False
[2025-06-04 04:58:37] 2025-06-04 08:58:18,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:58:37] 2025-06-04 08:58:18,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:58:37] 2025-06-04 08:58:18,782 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:58:37] 2025-06-04 08:58:18,783 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:58:37] 2025-06-04 08:58:18,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:58:37] 2025-06-04 08:58:18,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:58:37] 2025-06-04 08:58:18,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:58:37] 2025-06-04 08:58:19,266 | INFO     | all payload control threads have been joined
[2025-06-04 04:58:37] 2025-06-04 08:58:19,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:58:37] 2025-06-04 08:58:19,529 | INFO     | aborting loop
[2025-06-04 04:58:37] 2025-06-04 08:58:19,787 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:19,788 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:19,836 | INFO     | all data control threads have been joined
[2025-06-04 04:58:37] 2025-06-04 08:58:19,896 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:19,912 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:20,022 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:20,092 | INFO     | all job control threads have been joined
[2025-06-04 04:58:37] 2025-06-04 08:58:20,200 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:20,271 | INFO     | [payload] control thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:20,531 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:20,706 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:20,764 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:20,840 | INFO     | [data] control thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:20,956 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:21,036 | INFO     | [job] validate thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:21,097 | INFO     | [job] control thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:21,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:58:37] 2025-06-04 08:58:25,640 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:29,542 | INFO     | job.realtimelogging is not enabled
[2025-06-04 04:58:37] 2025-06-04 08:58:30,548 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:58:37] 2025-06-04 08:58:31,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623305365312)>', '<ExcThread(monitor, started 139622206142208)>']
[2025-06-04 04:58:37] 2025-06-04 08:58:31,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:58:37] 2025-06-04 08:58:31,846 | INFO     | [monitor] control thread has ended
[2025-06-04 04:58:37] 2025-06-04 08:58:36,751 | INFO     | all workflow threads have been joined
[2025-06-04 04:58:37] 2025-06-04 08:58:36,761 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:58:37] 2025-06-04 08:58:36,761 | INFO     | traces error code: 0
[2025-06-04 04:58:37] 2025-06-04 08:58:36,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:58:37] 2025-06-04 08:58:36,846 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:58:37] 2025-06-04 08:58:36,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:58:37] 2025-06-04 08:58:36,854 [wrapper] pilotpid: 20110
[2025-06-04 04:58:37] 2025-06-04 08:58:36,857 [wrapper] Pilot exit status: 0
[2025-06-04 04:58:37] 2025-06-04 08:58:36,873 [wrapper] pandaids: 6678286374
[2025-06-04 04:58:37] 2025-06-04 08:58:36,911 [wrapper] cleanup supervisor_pilot   956 20111
[2025-06-04 04:58:37] 2025-06-04 08:58:36,915 [wrapper] Test setup, not cleaning
[2025-06-04 04:58:37] 2025-06-04 08:58:36,919 [wrapper] apfmon messages muted
[2025-06-04 04:58:37] 2025-06-04 08:58:36,923 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:58:37] 2025-06-04 08:58:36,927 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:58:37]  *** Error codes and diagnostics ***
[2025-06-04 04:58:37]     "exeErrorCode": 0,
[2025-06-04 04:58:37]     "exeErrorDiag": "",
[2025-06-04 04:58:37]     "pilotErrorCode": 0,
[2025-06-04 04:58:37]     "pilotErrorDiag": "",
[2025-06-04 04:58:37]  *** Listing of results directory ***
[2025-06-04 04:58:37] total 395520
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:09 queuedata.json
[2025-06-04 04:58:37] -rwx------ 1 boincer umatlas     37140 Jun  3 23:10 runpilot2-wrapper.sh
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas       100 Jun  4 03:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:58:37] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 03:50 run_atlas
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas       105 Jun  4 03:50 job.xml
[2025-06-04 04:58:37] -rw-r--r-- 2 boincer umatlas 215420382 Jun  4 03:50 EVNT.45006593._002055.pool.root.1
[2025-06-04 04:58:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:50 start_atlas.sh
[2025-06-04 04:58:37] drwxrwx--x 2 boincer umatlas      4096 Jun  4 03:50 shared
[2025-06-04 04:58:37] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 03:50 input.tar.gz
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas         0 Jun  4 03:50 boinc_lockfile
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 03:50 pandaJob.out
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas    986745 Jun  4 03:51 agis_schedconf.cvmfs.json
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas   1603667 Jun  4 03:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:58:37] drwx------ 4 boincer umatlas      4096 Jun  4 03:51 pilot3
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 04:55 init_data.xml
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas 184241503 Jun  4 04:57 HITS.45006595._051302.pool.root.1
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas        95 Jun  4 04:58 pilot_heartbeat.json
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas      1049 Jun  4 04:58 memory_monitor_summary.json
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas       530 Jun  4 04:58 boinc_task_state.xml
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas    369740 Jun  4 04:58 log.45006595._051302.job.log.tgz.1
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas      7756 Jun  4 04:58 heartbeat.json
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 04:58 boinc_mmap_file
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas        27 Jun  4 04:58 wrapper_checkpoint.txt
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas      4548 Jun  4 04:58 pilotlog.txt
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas    390688 Jun  4 04:58 log.45006595._051302.job.log.1
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas       357 Jun  4 04:58 output.list
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas       620 Jun  4 04:58 runtime_log
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas    778240 Jun  4 04:58 result.tar.gz
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas       659 Jun  4 04:58 zZrMDmFhtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS1mKDmJU7uGm.diag
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 04:58 runtime_log.err
[2025-06-04 04:58:37] -rw-r--r-- 1 boincer umatlas     21292 Jun  4 04:58 stderr.txt
[2025-06-04 04:58:37] HITS file was successfully produced:
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas 184241503 Jun  4 04:57 shared/HITS.pool.root.1
[2025-06-04 04:58:37]  *** Contents of shared directory: ***
[2025-06-04 04:58:37] total 391576
[2025-06-04 04:58:37] -rw-r--r-- 2 boincer umatlas 215420382 Jun  4 03:50 ATLAS.root_0
[2025-06-04 04:58:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:50 start_atlas.sh
[2025-06-04 04:58:37] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 03:50 input.tar.gz
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas 184241503 Jun  4 04:57 HITS.pool.root.1
[2025-06-04 04:58:37] -rw------- 1 boincer umatlas    778240 Jun  4 04:58 result.tar.gz
04:58:38 (16456): run_atlas exited; CPU time 43009.796424
04:58:38 (16456): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN