Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:41:51 (1320380): wrapper (7.7.26015): starting
18:41:51 (1320380): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 18:41:51] Arguments: --nthreads 3
[2025-06-04 18:41:51] Threads: 3
[2025-06-04 18:41:51] Checking for CVMFS
[2025-06-04 18:41:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:41:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:41:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:41:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:41:51] 2.9.2.0 406019 2747 82372 146788 0 56 31696640 36864001 0 130560 0 2468312 99.992 679346 46374 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 18:41:51] CVMFS is ok
[2025-06-04 18:41:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:41:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:41:51] Further information can be found at the LHC@home message board.
[2025-06-04 18:41:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:41:51] Checking for apptainer binary...
[2025-06-04 18:41:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:41:51] Running /usr/bin/apptainer --version
[2025-06-04 18:41:51] apptainer version 1.3.6-6.1
[2025-06-04 18:41:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:41:51] thA327
[2025-06-04 18:41:51] apptainer works
[2025-06-04 18:41:51] Set ATHENA_PROC_NUMBER=3
[2025-06-04 18:41:51] Set ATHENA_CORE_NUMBER=3
[2025-06-04 18:41:51] Starting ATLAS job with PandaID=6678285945
[2025-06-04 18:41:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:55:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:55:56]  storage_token=
[2025-06-04 19:55:56]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678285945/log.45006595._051039.job.log.tgz.1
[2025-06-04 19:55:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/2c/log.45006595._051039.job.log.tgz.1
[2025-06-04 19:55:56]  workdir=None
[2025-06-04 19:55:56] ]
[2025-06-04 19:55:56] 2025-06-04 17:55:31,352 | INFO     | transferring file log.45006595._051039.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678285945/log.45006595._051039.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 19:55:56] 2025-06-04 17:55:31,352 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678285945/log.45006595._051039.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0510
[2025-06-04 19:55:56] 2025-06-04 17:55:31,365 | INFO     | adding to output.list: log.45006595._051039.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/2c/log.45006595._051039.job.log.tg
[2025-06-04 19:55:56] 2025-06-04 17:55:31,366 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 19:55:56] 2025-06-04 17:55:31,366 | INFO     | summary of transferred files:
[2025-06-04 19:55:56] 2025-06-04 17:55:31,366 | INFO     |  -- lfn=log.45006595._051039.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 19:55:56] 2025-06-04 17:55:31,366 | INFO     | stage-out finished correctly
[2025-06-04 19:55:56] 2025-06-04 17:55:32,492 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 19:55:56] 2025-06-04 17:55:33,572 | INFO     | job 6678285945 has state=finished
[2025-06-04 19:55:56] 2025-06-04 17:55:33,573 | INFO     | preparing for final server update for job 6678285945 in state='finished'
[2025-06-04 19:55:56] 2025-06-04 17:55:34,142 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 19:55:56] 2025-06-04 17:55:34,143 | INFO     | this job has now completed (state=finished)
[2025-06-04 19:55:56] 2025-06-04 17:55:34,143 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 19:55:56] 2025-06-04 17:55:34,143 | INFO     | log transfer has been attempted: DONE
[2025-06-04 19:55:56] 2025-06-04 17:55:34,143 | INFO     | job 6678285945 has finished - writing final server update
[2025-06-04 19:55:56] 2025-06-04 17:55:34,143 | INFO     | total number of processed events: 400 (read)
[2025-06-04 19:55:56] 2025-06-04 17:55:34,144 | INFO     | executing command: lscpu
[2025-06-04 19:55:56] 2025-06-04 17:55:34,161 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 19:55:56] 2025-06-04 17:55:35,361 | WARNING  | process 1330514 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 19:55:56] 2025-06-04 17:55:35,362 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678285945/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:55:56] 2025-06-04 17:55:35,362 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678285945/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:55:56] 2025-06-04 17:55:35,363 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2053482 B
[2025-06-04 19:55:56] 2025-06-04 17:55:35,363 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15795 B
[2025-06-04 19:55:56] 2025-06-04 17:55:35,363 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 19:55:56] 2025-06-04 17:55:37,764 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 19:55:56] 2025-06-04 17:55:37,764 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678285945/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,765 | INFO     | extracted standard info from prmon json
[2025-06-04 19:55:56] 2025-06-04 17:55:37,765 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:55:56] 2025-06-04 17:55:37,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:55:56] 2025-06-04 17:55:37,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:55:56] 2025-06-04 17:55:37,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | sum of square deviations: 85136480.0
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | sum of deviations: -9072040780.0
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | mean x: 1749057595.0
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | mean y: 2459359.7230769233
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | -- intersect: 186379930314.69708
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | intersect: 186379930314.69708
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | chi2: 0.058053791454093694
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | -- intersect: 186379930314.69708
[2025-06-04 19:55:56] 2025-06-04 17:55:37,766 | INFO     | current memory leak: -106.56 B/s (using 65 data points, chi2=0.06)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | ..............................
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | . Timing measurements:
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | . get job = 0 s
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | . initial setup = 1 s
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | . payload setup = 3 s
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | . stage-in = 0 s
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | . payload execution = 4392 s
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | . stage-out = 0 s
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | . log creation = 0 s
[2025-06-04 19:55:56] 2025-06-04 17:55:37,769 | INFO     | ..............................
[2025-06-04 19:55:56] 2025-06-04 17:55:37,786 | INFO     | sufficient remaining disk space (369232969728 B)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,791 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,802 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6678285945: 2369002 B (within 2537553920 B limit)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6678285945/HITS.45006595._051039.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | total size of present files: 0 B (workdir size: 2369002 B)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6678285945/HITS.45006595._051039.pool.root.1 since it does not exist
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | 
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | job summary report
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | --------------------------------------------------
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | PanDA job id: 6678285945
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | task id: 45006595
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | errors: (none)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | pilot state: finished 
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | transexitcode: 0
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | exeerrorcode: 0
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | exeerrordiag: 
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | exitcode: 0
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | exitmsg: OK
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | cpuconsumptiontime: 12547 s
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | nevents: 400
[2025-06-04 19:55:56] 2025-06-04 17:55:37,803 | INFO     | neventsw: 0
[2025-06-04 19:55:56] 2025-06-04 17:55:37,804 | INFO     | pid: 1330514
[2025-06-04 19:55:56] 2025-06-04 17:55:37,804 | INFO     | pgrp: 1330514
[2025-06-04 19:55:56] 2025-06-04 17:55:37,804 | INFO     | corecount: 3
[2025-06-04 19:55:56] 2025-06-04 17:55:37,804 | INFO     | event service: False
[2025-06-04 19:55:56] 2025-06-04 17:55:37,804 | INFO     | sizes: {0: 2397345, 2: 2397551, 11: 2397579, 4400: 2423682, 4401: 2432629, 4402: 2432685, 4407: 2432983}
[2025-06-04 19:55:56] 2025-06-04 17:55:37,804 | INFO     | --------------------------------------------------
[2025-06-04 19:55:56] 2025-06-04 17:55:37,804 | INFO     | 
[2025-06-04 19:55:56] 2025-06-04 17:55:37,804 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,817 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,817 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:55:56] 2025-06-04 17:55:37,817 | INFO     | job 6678285945 has completed (purged errors)
[2025-06-04 19:55:56] 2025-06-04 17:55:37,817 | INFO     | overall cleanup function is called
[2025-06-04 19:55:56] 2025-06-04 17:55:37,850 | INFO     | number of running child processes to parent process 1330514: 1
[2025-06-04 19:55:56] 2025-06-04 17:55:37,850 | INFO     | maximum number of monitored processes: 6
[2025-06-04 19:55:56] 2025-06-04 17:55:37,850 | INFO     | aborting job monitoring since job object (job id=6678285945) has expired
[2025-06-04 19:55:56] 2025-06-04 17:55:38,824 | INFO     | --- collectZombieJob: --- 10, [1330514]
[2025-06-04 19:55:56] 2025-06-04 17:55:38,825 | INFO     | zombie collector waiting for pid 1330514
[2025-06-04 19:55:56] 2025-06-04 17:55:38,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:55:56] 2025-06-04 17:55:38,825 | INFO     | collected zombie processes
[2025-06-04 19:55:56] 2025-06-04 17:55:38,825 | INFO     | will attempt to kill all subprocesses of pid=1330514
[2025-06-04 19:55:56] 2025-06-04 17:55:38,866 | INFO     | process IDs to be killed: [1330514] (in reverse order)
[2025-06-04 19:55:56] 2025-06-04 17:55:38,891 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:55:56] 2025-06-04 17:55:38,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:55:56] 2025-06-04 17:55:38,893 | INFO     | did not find any defunct processes belonging to 1330514
[2025-06-04 19:55:56] 2025-06-04 17:55:38,894 | INFO     | did not find any defunct processes belonging to 1330514
[2025-06-04 19:55:56] 2025-06-04 17:55:38,894 | INFO     | ready for new job
[2025-06-04 19:55:56] 2025-06-04 17:55:38,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:55:56] 2025-06-04 17:55:38,894 | INFO     | **************************************
[2025-06-04 19:55:56] 2025-06-04 17:55:38,894 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:55:56] 2025-06-04 17:55:38,894 | INFO     | **************************************
[2025-06-04 19:55:56] 2025-06-04 17:55:38,895 | INFO     | 
[2025-06-04 19:55:56] 2025-06-04 17:55:38,895 | INFO     | architecture information:
[2025-06-04 19:55:56] 2025-06-04 17:55:38,895 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:55:56] 2025-06-04 17:55:38,905 | INFO     | cat /etc/os-release:
[2025-06-04 19:55:56] NAME="CentOS Linux"
[2025-06-04 19:55:56] VERSION="7 (Core)"
[2025-06-04 19:55:56] ID="centos"
[2025-06-04 19:55:56] ID_LIKE="rhel fedora"
[2025-06-04 19:55:56] VERSION_ID="7"
[2025-06-04 19:55:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:55:56] ANSI_COLOR="0;31"
[2025-06-04 19:55:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:55:56] HOME_URL="https://www.centos.org/"
[2025-06-04 19:55:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:55:56] 
[2025-06-04 19:55:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:55:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:55:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:55:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:55:56] 
[2025-06-04 19:55:56] 2025-06-04 17:55:38,905 | INFO     | **************************************
[2025-06-04 19:55:56] 2025-06-04 17:55:39,275 | INFO     | PID=1324017 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 19:55:56] 2025-06-04 17:55:39,408 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 19:55:56] 2025-06-04 17:55:39,422 | INFO     | sufficient remaining disk space (369236115456 B)
[2025-06-04 19:55:56] 2025-06-04 17:55:39,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:55:56] 2025-06-04 17:55:39,422 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:55:56] 2025-06-04 17:55:39,422 | INFO     | update_server=False
[2025-06-04 19:55:56] 2025-06-04 17:55:39,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:55:56] 2025-06-04 17:55:39,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:55:56] 2025-06-04 17:55:39,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:55:56] 2025-06-04 17:55:39,423 | INFO     | aborting loop
[2025-06-04 19:55:56] 2025-06-04 17:55:39,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:55:56] 2025-06-04 17:55:39,423 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:55:56] 2025-06-04 17:55:39,423 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:55:56] 2025-06-04 17:55:39,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:55:56] 2025-06-04 17:55:39,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:55:56] 2025-06-04 17:55:39,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:55:56] 2025-06-04 17:55:39,541 | INFO     | all data control threads have been joined
[2025-06-04 19:55:56] 2025-06-04 17:55:39,818 | INFO     | all payload control threads have been joined
[2025-06-04 19:55:56] 2025-06-04 17:55:39,943 | INFO     | all job control threads have been joined
[2025-06-04 19:55:56] 2025-06-04 17:55:40,428 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:40,428 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:40,428 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:40,547 | INFO     | [data] control thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:40,589 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:40,589 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:40,820 | INFO     | [payload] control thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:40,879 | INFO     | [job] validate thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:40,949 | INFO     | [job] control thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:40,992 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:41,034 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:41,194 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:41,429 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:41,713 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:43,430 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:49,729 | INFO     | job.realtimelogging is not enabled
[2025-06-04 19:55:56] 2025-06-04 17:55:50,735 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:55:56] 2025-06-04 17:55:51,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804584781632)>', '<ExcThread(monitor, started 139803702048512)>']
[2025-06-04 19:55:56] 2025-06-04 17:55:52,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:55:56] 2025-06-04 17:55:52,489 | INFO     | [monitor] control thread has ended
[2025-06-04 19:55:56] 2025-06-04 17:55:56,827 | INFO     | all workflow threads have been joined
[2025-06-04 19:55:56] 2025-06-04 17:55:56,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:55:56] 2025-06-04 17:55:56,827 | INFO     | traces error code: 0
[2025-06-04 19:55:56] 2025-06-04 17:55:56,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:55:56] 2025-06-04 17:55:56,876 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:55:56] 2025-06-04 17:55:56,879 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:55:56] 2025-06-04 17:55:56,882 [wrapper] pilotpid: 1324017
[2025-06-04 19:55:56] 2025-06-04 17:55:56,884 [wrapper] Pilot exit status: 0
[2025-06-04 19:55:56] 2025-06-04 17:55:56,892 [wrapper] pandaids: 6678285945
[2025-06-04 19:55:56] 2025-06-04 17:55:56,908 [wrapper] cleanup supervisor_pilot 1339914 1324018
[2025-06-04 19:55:56] 2025-06-04 17:55:56,911 [wrapper] Test setup, not cleaning
[2025-06-04 19:55:56] 2025-06-04 17:55:56,914 [wrapper] apfmon messages muted
[2025-06-04 19:55:56] 2025-06-04 17:55:56,916 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:55:56] 2025-06-04 17:55:56,919 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:55:56]  *** Error codes and diagnostics ***
[2025-06-04 19:55:56]     "exeErrorCode": 0,
[2025-06-04 19:55:56]     "exeErrorDiag": "",
[2025-06-04 19:55:56]     "pilotErrorCode": 0,
[2025-06-04 19:55:56]     "pilotErrorDiag": "",
[2025-06-04 19:55:56]  *** Listing of results directory ***
[2025-06-04 19:55:56] total 389860
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:04 queuedata.json
[2025-06-04 19:55:56] -rwx------ 1 boinc boinc     37140 Jun  4 05:05 runpilot2-wrapper.sh
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc       100 Jun  4 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:55:56] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 18:41 run_atlas
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc       105 Jun  4 18:41 job.xml
[2025-06-04 19:55:56] -rw-r--r-- 2 boinc boinc 216652181 Jun  4 18:41 EVNT.45006593._002045.pool.root.1
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc      6929 Jun  4 18:41 init_data.xml
[2025-06-04 19:55:56] drwxrwx--x 2 boinc boinc      4096 Jun  4 18:41 shared
[2025-06-04 19:55:56] -rw-r--r-- 2 boinc boinc    508882 Jun  4 18:41 input.tar.gz
[2025-06-04 19:55:56] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:41 start_atlas.sh
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc         0 Jun  4 18:41 boinc_lockfile
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc      2525 Jun  4 18:41 pandaJob.out
[2025-06-04 19:55:56] -rw------- 1 boinc boinc    990984 Jun  4 18:41 agis_schedconf.cvmfs.json
[2025-06-04 19:55:56] -rw------- 1 boinc boinc   1598969 Jun  4 18:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:55:56] drwx------ 4 boinc boinc      4096 Jun  4 18:41 pilot3
[2025-06-04 19:55:56] -rw------- 1 boinc boinc 177415465 Jun  4 19:55 HITS.45006595._051039.pool.root.1
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc       529 Jun  4 19:55 boinc_task_state.xml
[2025-06-04 19:55:56] -rw------- 1 boinc boinc        95 Jun  4 19:55 pilot_heartbeat.json
[2025-06-04 19:55:56] -rw------- 1 boinc boinc      1017 Jun  4 19:55 memory_monitor_summary.json
[2025-06-04 19:55:56] -rw------- 1 boinc boinc    220587 Jun  4 19:55 log.45006595._051039.job.log.tgz.1
[2025-06-04 19:55:56] -rw------- 1 boinc boinc      7651 Jun  4 19:55 heartbeat.json
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc        27 Jun  4 19:55 wrapper_checkpoint.txt
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc      8192 Jun  4 19:55 boinc_mmap_file
[2025-06-04 19:55:56] -rw------- 1 boinc boinc      4871 Jun  4 19:55 pilotlog.txt
[2025-06-04 19:55:56] -rw------- 1 boinc boinc    435987 Jun  4 19:55 log.45006595._051039.job.log.1
[2025-06-04 19:55:56] -rw------- 1 boinc boinc       357 Jun  4 19:55 output.list
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc       620 Jun  4 19:55 runtime_log
[2025-06-04 19:55:56] -rw------- 1 boinc boinc    675840 Jun  4 19:55 result.tar.gz
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc      8733 Jun  4 19:55 runtime_log.err
[2025-06-04 19:55:56] -rw------- 1 boinc boinc       658 Jun  4 19:55 AixKDmNctg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUzmKDmBpwWMo.diag
[2025-06-04 19:55:56] -rw-r--r-- 1 boinc boinc     22495 Jun  4 19:55 stderr.txt
[2025-06-04 19:55:56] HITS file was successfully produced:
[2025-06-04 19:55:56] -rw------- 1 boinc boinc 177415465 Jun  4 19:55 shared/HITS.pool.root.1
[2025-06-04 19:55:56]  *** Contents of shared directory: ***
[2025-06-04 19:55:56] total 386020
[2025-06-04 19:55:56] -rw-r--r-- 2 boinc boinc 216652181 Jun  4 18:41 ATLAS.root_0
[2025-06-04 19:55:56] -rw-r--r-- 2 boinc boinc    508882 Jun  4 18:41 input.tar.gz
[2025-06-04 19:55:56] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:41 start_atlas.sh
[2025-06-04 19:55:56] -rw------- 1 boinc boinc 177415465 Jun  4 19:55 HITS.pool.root.1
[2025-06-04 19:55:56] -rw------- 1 boinc boinc    675840 Jun  4 19:55 result.tar.gz
19:55:58 (1320380): run_atlas exited; CPU time 12559.632943
19:55:58 (1320380): called boinc_finish(0)

</stderr_txt>
]]>

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