Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:48:45 (30747): wrapper (7.7.26015): starting
03:48:45 (30747): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 03:48:45] Arguments: --nthreads 12
[2025-06-04 03:48:45] Threads: 12
[2025-06-04 03:48:45] Checking for CVMFS
[2025-06-04 03:48:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:48:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:48:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:48:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:48:46] 2.11.2.0 2933 35402 86996 146772 2 56 18293997 20275201 1 130560 0 15677469 99.983 6146231 7547 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 03:48:46] CVMFS is ok
[2025-06-04 03:48:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:48:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:48:46] Further information can be found at the LHC@home message board.
[2025-06-04 03:48:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:48:46] Checking for apptainer binary...
[2025-06-04 03:48:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:48:46] Running /usr/bin/apptainer --version
[2025-06-04 03:48:46] apptainer version 1.3.2-1.el7
[2025-06-04 03:48:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:48:47] c-205-15.aglt2.org
[2025-06-04 03:48:47] apptainer works
[2025-06-04 03:48:47] Set ATHENA_PROC_NUMBER=12
[2025-06-04 03:48:47] Set ATHENA_CORE_NUMBER=12
[2025-06-04 03:48:47] Starting ATLAS job with PandaID=6678285526
[2025-06-04 03:48:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:53:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:53:07]  protocol_id=None
[2025-06-04 04:53:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 04:53:07]  replicas=None
[2025-06-04 04:53:07]  scope=mc23_13p6TeV
[2025-06-04 04:53:07]  status=None
[2025-06-04 04:53:07]  status_code=0
[2025-06-04 04:53:07]  storage_token=
[2025-06-04 04:53:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678285526/log.45006595._050735.job.log.tgz.1
[2025-06-04 04:53:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/09/log.45006595._050735.job.log.tgz.1
[2025-06-04 04:53:07]  workdir=None
[2025-06-04 04:53:07] ]
[2025-06-04 04:53:07] 2025-06-04 08:52:45,718 | INFO     | transferring file log.45006595._050735.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678285526/log.45006595._050735.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 04:53:07] 2025-06-04 08:52:45,718 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678285526/log.45006595._050735.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._050735.job
[2025-06-04 04:53:07] 2025-06-04 08:52:45,743 | INFO     | adding to output.list: log.45006595._050735.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/09/log.45006595._050735.job.log.tg
[2025-06-04 04:53:07] 2025-06-04 08:52:45,744 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 04:53:07] 2025-06-04 08:52:45,745 | INFO     | summary of transferred files:
[2025-06-04 04:53:07] 2025-06-04 08:52:45,745 | INFO     |  -- lfn=log.45006595._050735.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 04:53:07] 2025-06-04 08:52:45,745 | INFO     | stage-out finished correctly
[2025-06-04 04:53:07] 2025-06-04 08:52:45,928 | WARNING  | process 8544 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 04:53:07] 2025-06-04 08:52:45,928 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678285526/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:53:07] 2025-06-04 08:52:46,013 | INFO     | number of running child processes to parent process 8544: 1
[2025-06-04 04:53:07] 2025-06-04 08:52:46,013 | INFO     | maximum number of monitored processes: 6
[2025-06-04 04:53:07] 2025-06-04 08:52:47,085 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 04:53:07] 2025-06-04 08:52:48,516 | INFO     | monitor loop #288: job 0:6678285526 is in state 'finished'
[2025-06-04 04:53:07] 2025-06-04 08:52:48,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:53:07] 2025-06-04 08:52:49,121 | INFO     | job 6678285526 has state=finished
[2025-06-04 04:53:07] 2025-06-04 08:52:49,121 | INFO     | preparing for final server update for job 6678285526 in state='finished'
[2025-06-04 04:53:07] 2025-06-04 08:52:49,202 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 04:53:07] 2025-06-04 08:52:49,202 | INFO     | this job has now completed (state=finished)
[2025-06-04 04:53:07] 2025-06-04 08:52:49,203 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 04:53:07] 2025-06-04 08:52:49,203 | INFO     | log transfer has been attempted: DONE
[2025-06-04 04:53:07] 2025-06-04 08:52:49,203 | INFO     | job 6678285526 has finished - writing final server update
[2025-06-04 04:53:07] 2025-06-04 08:52:49,203 | INFO     | total number of processed events: 400 (read)
[2025-06-04 04:53:07] 2025-06-04 08:52:49,205 | INFO     | executing command: lscpu
[2025-06-04 04:53:07] 2025-06-04 08:52:49,231 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 04:53:07] 2025-06-04 08:52:51,019 | INFO     | monitor loop #289: job 0:6678285526 is in state 'finished'
[2025-06-04 04:53:07] 2025-06-04 08:52:51,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:53:07] 2025-06-04 08:52:53,521 | INFO     | monitor loop #290: job 0:6678285526 is in state 'finished'
[2025-06-04 04:53:07] 2025-06-04 08:52:53,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:53:07] 2025-06-04 08:52:53,941 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 04:53:07] 2025-06-04 08:52:53,942 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678285526/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:53:07] 2025-06-04 08:52:53,942 | INFO     | extracted standard info from prmon json
[2025-06-04 04:53:07] 2025-06-04 08:52:53,942 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:53:07] 2025-06-04 08:52:53,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:53:07] 2025-06-04 08:52:53,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:53:07] 2025-06-04 08:52:53,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:53:07] 2025-06-04 08:52:53,945 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:53:07] 2025-06-04 08:52:53,945 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 04:53:07] 2025-06-04 08:52:53,945 | INFO     | sum of deviations: -5994841734.000002
[2025-06-04 04:53:07] 2025-06-04 08:52:53,946 | INFO     | mean x: 1749025353.5
[2025-06-04 04:53:07] 2025-06-04 08:52:53,946 | INFO     | mean y: 2755703.785714286
[2025-06-04 04:53:07] 2025-06-04 08:52:53,946 | INFO     | -- intersect: 192608764073.01273
[2025-06-04 04:53:07] 2025-06-04 08:52:53,946 | INFO     | intersect: 192608764073.01273
[2025-06-04 04:53:07] 2025-06-04 08:52:53,946 | INFO     | chi2: 0.0485845717157529
[2025-06-04 04:53:07] 2025-06-04 08:52:53,946 | INFO     | -- intersect: 192608764073.01273
[2025-06-04 04:53:07] 2025-06-04 08:52:53,947 | INFO     | current memory leak: -110.12 B/s (using 56 data points, chi2=0.05)
[2025-06-04 04:53:07] 2025-06-04 08:52:53,947 | INFO     | ..............................
[2025-06-04 04:53:07] 2025-06-04 08:52:53,947 | INFO     | . Timing measurements:
[2025-06-04 04:53:07] 2025-06-04 08:52:53,947 | INFO     | . get job = 0 s
[2025-06-04 04:53:07] 2025-06-04 08:52:53,947 | INFO     | . initial setup = 2 s
[2025-06-04 04:53:07] 2025-06-04 08:52:53,948 | INFO     | . payload setup = 9 s
[2025-06-04 04:53:07] 2025-06-04 08:52:53,948 | INFO     | . stage-in = 0 s
[2025-06-04 04:53:07] 2025-06-04 08:52:53,948 | INFO     | . payload execution = 3794 s
[2025-06-04 04:53:07] 2025-06-04 08:52:53,948 | INFO     | . stage-out = 0 s
[2025-06-04 04:53:07] 2025-06-04 08:52:53,948 | INFO     | . log creation = 0 s
[2025-06-04 04:53:07] 2025-06-04 08:52:53,948 | INFO     | ..............................
[2025-06-04 04:53:07] 2025-06-04 08:52:54,087 | INFO     | PID=1993 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 04:53:07] 2025-06-04 08:52:54,390 | INFO     | 
[2025-06-04 04:53:07] 2025-06-04 08:52:54,391 | INFO     | job summary report
[2025-06-04 04:53:07] 2025-06-04 08:52:54,391 | INFO     | --------------------------------------------------
[2025-06-04 04:53:07] 2025-06-04 08:52:54,391 | INFO     | PanDA job id: 6678285526
[2025-06-04 04:53:07] 2025-06-04 08:52:54,391 | INFO     | task id: 45006595
[2025-06-04 04:53:07] 2025-06-04 08:52:54,391 | INFO     | errors: (none)
[2025-06-04 04:53:07] 2025-06-04 08:52:54,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:53:07] 2025-06-04 08:52:54,392 | INFO     | pilot state: finished 
[2025-06-04 04:53:07] 2025-06-04 08:52:54,392 | INFO     | transexitcode: 0
[2025-06-04 04:53:07] 2025-06-04 08:52:54,392 | INFO     | exeerrorcode: 0
[2025-06-04 04:53:07] 2025-06-04 08:52:54,392 | INFO     | exeerrordiag: 
[2025-06-04 04:53:07] 2025-06-04 08:52:54,392 | INFO     | exitcode: 0
[2025-06-04 04:53:07] 2025-06-04 08:52:54,392 | INFO     | exitmsg: OK
[2025-06-04 04:53:07] 2025-06-04 08:52:54,393 | INFO     | cpuconsumptiontime: 40509 s
[2025-06-04 04:53:07] 2025-06-04 08:52:54,393 | INFO     | nevents: 400
[2025-06-04 04:53:07] 2025-06-04 08:52:54,393 | INFO     | neventsw: 0
[2025-06-04 04:53:07] 2025-06-04 08:52:54,393 | INFO     | pid: 8544
[2025-06-04 04:53:07] 2025-06-04 08:52:54,393 | INFO     | pgrp: 8544
[2025-06-04 04:53:07] 2025-06-04 08:52:54,393 | INFO     | corecount: 12
[2025-06-04 04:53:07] 2025-06-04 08:52:54,394 | INFO     | event service: False
[2025-06-04 04:53:07] 2025-06-04 08:52:54,394 | INFO     | sizes: {0: 2405133, 1: 2405133, 5: 2405367, 11: 2405423, 3808: 2431046, 3809: 2439987, 3810: 2440171, 3817: 2440341}
[2025-06-04 04:53:07] 2025-06-04 08:52:54,394 | INFO     | --------------------------------------------------
[2025-06-04 04:53:07] 2025-06-04 08:52:54,394 | INFO     | 
[2025-06-04 04:53:07] 2025-06-04 08:52:54,394 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 04:53:07] 2025-06-04 08:52:54,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,437 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,437 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,439 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:53:07] 2025-06-04 08:52:54,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,439 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:53:07] 2025-06-04 08:52:54,440 | INFO     | job 6678285526 has completed (purged errors)
[2025-06-04 04:53:07] 2025-06-04 08:52:54,440 | INFO     | overall cleanup function is called
[2025-06-04 04:53:07] 2025-06-04 08:52:55,448 | INFO     | --- collectZombieJob: --- 10, [8544]
[2025-06-04 04:53:07] 2025-06-04 08:52:55,448 | INFO     | zombie collector waiting for pid 8544
[2025-06-04 04:53:07] 2025-06-04 08:52:55,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:53:07] 2025-06-04 08:52:55,449 | INFO     | collected zombie processes
[2025-06-04 04:53:07] 2025-06-04 08:52:55,449 | INFO     | will attempt to kill all subprocesses of pid=8544
[2025-06-04 04:53:07] 2025-06-04 08:52:55,539 | INFO     | process IDs to be killed: [8544] (in reverse order)
[2025-06-04 04:53:07] 2025-06-04 08:52:55,590 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:53:07] 2025-06-04 08:52:55,591 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:53:07] 2025-06-04 08:52:55,594 | INFO     | did not find any defunct processes belonging to 8544
[2025-06-04 04:53:07] 2025-06-04 08:52:55,597 | INFO     | did not find any defunct processes belonging to 8544
[2025-06-04 04:53:07] 2025-06-04 08:52:55,597 | INFO     | ready for new job
[2025-06-04 04:53:07] 2025-06-04 08:52:55,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:53:07] 2025-06-04 08:52:55,598 | INFO     | **************************************
[2025-06-04 04:53:07] 2025-06-04 08:52:55,598 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:53:07] 2025-06-04 08:52:55,598 | INFO     | **************************************
[2025-06-04 04:53:07] 2025-06-04 08:52:55,598 | INFO     | 
[2025-06-04 04:53:07] 2025-06-04 08:52:55,599 | INFO     | architecture information:
[2025-06-04 04:53:07] 2025-06-04 08:52:55,599 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:53:07] 2025-06-04 08:52:55,613 | INFO     | cat /etc/os-release:
[2025-06-04 04:53:07] NAME="CentOS Linux"
[2025-06-04 04:53:07] VERSION="7 (Core)"
[2025-06-04 04:53:07] ID="centos"
[2025-06-04 04:53:07] ID_LIKE="rhel fedora"
[2025-06-04 04:53:07] VERSION_ID="7"
[2025-06-04 04:53:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:53:07] ANSI_COLOR="0;31"
[2025-06-04 04:53:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:53:07] HOME_URL="https://www.centos.org/"
[2025-06-04 04:53:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:53:07] 
[2025-06-04 04:53:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:53:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:53:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:53:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:53:07] 
[2025-06-04 04:53:07] 2025-06-04 08:52:55,613 | INFO     | **************************************
[2025-06-04 04:53:07] 2025-06-04 08:52:56,116 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 04:53:07] 2025-06-04 08:52:56,132 | INFO     | sufficient remaining disk space (29426188288 B)
[2025-06-04 04:53:07] 2025-06-04 08:52:56,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:53:07] 2025-06-04 08:52:56,132 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:53:07] 2025-06-04 08:52:56,132 | INFO     | update_server=False
[2025-06-04 04:53:07] 2025-06-04 08:52:56,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:53:07] 2025-06-04 08:52:56,133 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:53:07] 2025-06-04 08:52:56,133 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:53:07] 2025-06-04 08:52:56,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:53:07] 2025-06-04 08:52:56,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:53:07] 2025-06-04 08:52:56,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:53:07] 2025-06-04 08:52:56,542 | INFO     | all payload control threads have been joined
[2025-06-04 04:53:07] 2025-06-04 08:52:56,674 | INFO     | all data control threads have been joined
[2025-06-04 04:53:07] 2025-06-04 08:52:57,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:53:07] 2025-06-04 08:52:57,030 | INFO     | aborting loop
[2025-06-04 04:53:07] 2025-06-04 08:52:57,138 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:57,154 | INFO     | [job] validate thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:57,158 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:57,246 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:57,385 | INFO     | all job control threads have been joined
[2025-06-04 04:53:07] 2025-06-04 08:52:57,504 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:57,547 | INFO     | [payload] control thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:57,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:53:07] 2025-06-04 08:52:57,679 | INFO     | [data] control thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:57,708 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:57,887 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:58,035 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:58,259 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:58,348 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:58,390 | INFO     | [job] control thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:58,572 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:52:59,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:53:07] 2025-06-04 08:53:00,049 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:53:01,684 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:53:07] 2025-06-04 08:53:02,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116982646592)>', '<ExcThread(monitor, started 140116320315136)>']
[2025-06-04 04:53:07] 2025-06-04 08:53:02,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:53:07] 2025-06-04 08:53:02,164 | INFO     | [monitor] control thread has ended
[2025-06-04 04:53:07] 2025-06-04 08:53:07,085 | INFO     | all workflow threads have been joined
[2025-06-04 04:53:07] 2025-06-04 08:53:07,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:53:07] 2025-06-04 08:53:07,094 | INFO     | traces error code: 0
[2025-06-04 04:53:07] 2025-06-04 08:53:07,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:53:07] 2025-06-04 08:53:07,185 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:53:07] 2025-06-04 08:53:07,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:53:07] 2025-06-04 08:53:07,193 [wrapper] pilotpid: 1993
[2025-06-04 04:53:07] 2025-06-04 08:53:07,197 [wrapper] Pilot exit status: 0
[2025-06-04 04:53:07] 2025-06-04 08:53:07,213 [wrapper] pandaids: 6678285526
[2025-06-04 04:53:07] 2025-06-04 08:53:07,251 [wrapper] cleanup supervisor_pilot 20408 1994
[2025-06-04 04:53:07] 2025-06-04 08:53:07,255 [wrapper] Test setup, not cleaning
[2025-06-04 04:53:07] 2025-06-04 08:53:07,259 [wrapper] apfmon messages muted
[2025-06-04 04:53:07] 2025-06-04 08:53:07,263 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:53:07] 2025-06-04 08:53:07,267 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:53:07]  *** Error codes and diagnostics ***
[2025-06-04 04:53:07]     "exeErrorCode": 0,
[2025-06-04 04:53:07]     "exeErrorDiag": "",
[2025-06-04 04:53:07]     "pilotErrorCode": 0,
[2025-06-04 04:53:07]     "pilotErrorDiag": "",
[2025-06-04 04:53:07]  *** Listing of results directory ***
[2025-06-04 04:53:07] total 384344
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:41 pilot3.tar.gz
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 22:47 queuedata.json
[2025-06-04 04:53:07] -rwx------ 1 boincer umatlas     37140 Jun  3 22:47 runpilot2-wrapper.sh
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas       100 Jun  4 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:53:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 03:48 run_atlas
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas       105 Jun  4 03:48 job.xml
[2025-06-04 04:53:07] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 03:48 input.tar.gz
[2025-06-04 04:53:07] -rw-r--r-- 2 boincer umatlas 213508480 Jun  4 03:48 EVNT.45006593._002033.pool.root.1
[2025-06-04 04:53:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:48 start_atlas.sh
[2025-06-04 04:53:07] drwxrwx--x 2 boincer umatlas      4096 Jun  4 03:48 shared
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas         0 Jun  4 03:48 boinc_lockfile
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 03:48 pandaJob.out
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas    986745 Jun  4 03:48 agis_schedconf.cvmfs.json
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas   1603667 Jun  4 03:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:53:07] drwx------ 4 boincer umatlas      4096 Jun  4 03:49 pilot3
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 04:46 init_data.xml
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas 174773697 Jun  4 04:52 HITS.45006595._050735.pool.root.1
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas       530 Jun  4 04:52 boinc_task_state.xml
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas      1050 Jun  4 04:52 memory_monitor_summary.json
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas    347049 Jun  4 04:52 log.45006595._050735.job.log.tgz.1
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas        95 Jun  4 04:52 pilot_heartbeat.json
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas      7755 Jun  4 04:52 heartbeat.json
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 04:52 boinc_mmap_file
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas        27 Jun  4 04:52 wrapper_checkpoint.txt
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas      4476 Jun  4 04:53 pilotlog.txt
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas    376527 Jun  4 04:53 log.45006595._050735.job.log.1
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas       357 Jun  4 04:53 output.list
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas       620 Jun  4 04:53 runtime_log
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas    747520 Jun  4 04:53 result.tar.gz
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 04:53 runtime_log.err
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas       659 Jun  4 04:53 7RaMDmcLtg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9XaKDmuq6dWn.diag
[2025-06-04 04:53:07] -rw-r--r-- 1 boincer umatlas     21854 Jun  4 04:53 stderr.txt
[2025-06-04 04:53:07] HITS file was successfully produced:
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas 174773697 Jun  4 04:52 shared/HITS.pool.root.1
[2025-06-04 04:53:07]  *** Contents of shared directory: ***
[2025-06-04 04:53:07] total 380440
[2025-06-04 04:53:07] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 03:48 input.tar.gz
[2025-06-04 04:53:07] -rw-r--r-- 2 boincer umatlas 213508480 Jun  4 03:48 ATLAS.root_0
[2025-06-04 04:53:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:48 start_atlas.sh
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas 174773697 Jun  4 04:52 HITS.pool.root.1
[2025-06-04 04:53:07] -rw------- 1 boincer umatlas    747520 Jun  4 04:53 result.tar.gz
04:53:09 (30747): run_atlas exited; CPU time 40492.834949
04:53:09 (30747): called boinc_finish(0)

</stderr_txt>
]]>

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