Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:48:40 (18643): wrapper (7.7.26015): starting
20:48:40 (18643): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 20:48:40] Arguments: --nthreads 8
[2025-06-04 20:48:40] Threads: 8
[2025-06-04 20:48:40] Checking for CVMFS
[2025-06-04 20:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:48:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:48:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:48:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:48:43] 2.11.2.0 702 33770 84004 146791 3 158 20762595 25165825 4018 130560 0 18957549 99.794 20409154 2306 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 20:48:43] CVMFS is ok
[2025-06-04 20:48:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:48:44] Checking for apptainer binary...
[2025-06-04 20:48:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:48:44] Running /usr/bin/apptainer --version
[2025-06-04 20:48:44] apptainer version 1.3.2-1.el7
[2025-06-04 20:48:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:48:56] cg-vwn487.simple-grid.lan
[2025-06-04 20:48:56] apptainer works
[2025-06-04 20:48:56] Set ATHENA_PROC_NUMBER=8
[2025-06-04 20:48:56] Set ATHENA_CORE_NUMBER=8
[2025-06-04 20:48:56] Starting ATLAS job with PandaID=6678285625
[2025-06-04 20:48:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:21:10]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:21:10] 2025-06-04 22:20:43,268 | INFO     | monitor loop #867: job 0:6678285625 is in state 'finished'
[2025-06-05 00:21:10] 2025-06-04 22:20:43,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:21:10] 2025-06-04 22:20:45,772 | INFO     | monitor loop #868: job 0:6678285625 is in state 'finished'
[2025-06-05 00:21:10] 2025-06-04 22:20:45,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:21:10] 2025-06-04 22:20:48,276 | INFO     | monitor loop #869: job 0:6678285625 is in state 'finished'
[2025-06-05 00:21:10] 2025-06-04 22:20:48,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:21:10] 2025-06-04 22:20:48,604 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 00:21:10] 2025-06-04 22:20:48,605 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678285625/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:21:10] 2025-06-04 22:20:48,606 | INFO     | extracted standard info from prmon json
[2025-06-05 00:21:10] 2025-06-04 22:20:48,606 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:21:10] 2025-06-04 22:20:48,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:21:10] 2025-06-04 22:20:48,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:21:10] 2025-06-04 22:20:48,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:21:10] 2025-06-04 22:20:48,611 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:21:10] 2025-06-04 22:20:48,612 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,613 | INFO     | sum of deviations: 11499846391.999994
[2025-06-05 00:21:10] 2025-06-04 22:20:48,614 | INFO     | mean x: 1749069299.0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,614 | INFO     | mean y: 2489757.90821256
[2025-06-05 00:21:10] 2025-06-04 22:20:48,614 | INFO     | -- intersect: -7310917044.344619
[2025-06-05 00:21:10] 2025-06-04 22:20:48,614 | INFO     | intersect: -7310917044.344619
[2025-06-05 00:21:10] 2025-06-04 22:20:48,614 | INFO     | chi2: 1.6212690728993375
[2025-06-05 00:21:10] 2025-06-04 22:20:48,615 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 00:21:10] 2025-06-04 22:20:48,616 | INFO     | sum of deviations: 11292292062.000004
[2025-06-05 00:21:10] 2025-06-04 22:20:48,616 | INFO     | mean x: 1749069146.5
[2025-06-05 00:21:10] 2025-06-04 22:20:48,616 | INFO     | mean y: 2489595.3564356435
[2025-06-05 00:21:10] 2025-06-04 22:20:48,617 | INFO     | -- intersect: -7725511808.590741
[2025-06-05 00:21:10] 2025-06-04 22:20:48,617 | INFO     | intersect: -7725511808.590741
[2025-06-05 00:21:10] 2025-06-04 22:20:48,617 | INFO     | chi2: 1.6221565329918224
[2025-06-05 00:21:10] 2025-06-04 22:20:48,617 | INFO     | current chi2=1.6221565329918224 (change=-0.05473860615238917 %)
[2025-06-05 00:21:10] 2025-06-04 22:20:48,617 | INFO     | right removable region: 201
[2025-06-05 00:21:10] 2025-06-04 22:20:48,618 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 00:21:10] 2025-06-04 22:20:48,619 | INFO     | sum of deviations: -20170797837.0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,619 | INFO     | mean x: 1749069451.5
[2025-06-05 00:21:10] 2025-06-04 22:20:48,619 | INFO     | mean y: 2514317.99009901
[2025-06-05 00:21:10] 2025-06-04 22:20:48,619 | INFO     | -- intersect: 13806618952.312685
[2025-06-05 00:21:10] 2025-06-04 22:20:48,619 | INFO     | intersect: 13806618952.312685
[2025-06-05 00:21:10] 2025-06-04 22:20:48,620 | INFO     | chi2: 0.14720290284992385
[2025-06-05 00:21:10] 2025-06-04 22:20:48,620 | INFO     | current chi2=0.14720290284992385 (change=90.92051373146354 %)
[2025-06-05 00:21:10] 2025-06-04 22:20:48,620 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,621 | INFO     | sum of deviations: -17956303857.0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,622 | INFO     | mean x: 1749069604.0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,622 | INFO     | mean y: 2512449.6294416245
[2025-06-05 00:21:10] 2025-06-04 22:20:48,622 | INFO     | -- intersect: 13250750609.319567
[2025-06-05 00:21:10] 2025-06-04 22:20:48,622 | INFO     | intersect: 13250750609.319567
[2025-06-05 00:21:10] 2025-06-04 22:20:48,622 | INFO     | chi2: 0.1320851368321308
[2025-06-05 00:21:10] 2025-06-04 22:20:48,622 | INFO     | current chi2=0.1320851368321308 (change=10.270018950105825 %)
[2025-06-05 00:21:10] 2025-06-04 22:20:48,622 | INFO     | left removable region: 20
[2025-06-05 00:21:10] 2025-06-04 22:20:48,623 | INFO     | sum of square deviations: 1838657730.0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,624 | INFO     | sum of deviations: -4057444584.999999
[2025-06-05 00:21:10] 2025-06-04 22:20:48,624 | INFO     | mean x: 1749069726.0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,624 | INFO     | mean y: 2500265.9281767956
[2025-06-05 00:21:10] 2025-06-04 22:20:48,624 | INFO     | -- intersect: 3862247174.095872
[2025-06-05 00:21:10] 2025-06-04 22:20:48,624 | INFO     | intersect: 3862247174.095872
[2025-06-05 00:21:10] 2025-06-04 22:20:48,625 | INFO     | chi2: 0.06761920614127205
[2025-06-05 00:21:10] 2025-06-04 22:20:48,625 | INFO     | -- intersect: 3862247174.095872
[2025-06-05 00:21:10] 2025-06-04 22:20:48,625 | INFO     | current memory leak: -2.21 B/s (using 181 data points, chi2=0.07)
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | ..............................
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | . Timing measurements:
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | . get job = 0 s
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | . initial setup = 2 s
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | . payload setup = 15 s
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | . stage-in = 0 s
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | . payload execution = 12642 s
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | . stage-out = 1 s
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | . log creation = 0 s
[2025-06-05 00:21:10] 2025-06-04 22:20:48,626 | INFO     | ..............................
[2025-06-05 00:21:10] 2025-06-04 22:20:48,948 | INFO     | 
[2025-06-05 00:21:10] 2025-06-04 22:20:48,948 | INFO     | job summary report
[2025-06-05 00:21:10] 2025-06-04 22:20:48,948 | INFO     | --------------------------------------------------
[2025-06-05 00:21:10] 2025-06-04 22:20:48,948 | INFO     | PanDA job id: 6678285625
[2025-06-05 00:21:10] 2025-06-04 22:20:48,948 | INFO     | task id: 45006595
[2025-06-05 00:21:10] 2025-06-04 22:20:48,948 | INFO     | errors: (none)
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | pilot state: finished 
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | transexitcode: 0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | exeerrorcode: 0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | exeerrordiag: 
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | exitcode: 0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | exitmsg: OK
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | cpuconsumptiontime: 47033 s
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | nevents: 400
[2025-06-05 00:21:10] 2025-06-04 22:20:48,949 | INFO     | neventsw: 0
[2025-06-05 00:21:10] 2025-06-04 22:20:48,950 | INFO     | pid: 30888
[2025-06-05 00:21:10] 2025-06-04 22:20:48,950 | INFO     | pgrp: 30888
[2025-06-05 00:21:10] 2025-06-04 22:20:48,950 | INFO     | corecount: 8
[2025-06-05 00:21:10] 2025-06-04 22:20:48,950 | INFO     | event service: False
[2025-06-05 00:21:10] 2025-06-04 22:20:48,950 | INFO     | sizes: {0: 2397342, 1: 2397342, 8: 2397576, 11: 2397604, 12661: 2426796, 12662: 2426795, 12663: 2435976, 12673: 2436090}
[2025-06-05 00:21:10] 2025-06-04 22:20:48,950 | INFO     | --------------------------------------------------
[2025-06-05 00:21:10] 2025-06-04 22:20:48,950 | INFO     | 
[2025-06-05 00:21:10] 2025-06-04 22:20:48,950 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-05 00:21:10] 2025-06-04 22:20:49,001 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,001 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,001 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,001 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:21:10] 2025-06-04 22:20:49,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,003 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:21:10] 2025-06-04 22:20:49,003 | INFO     | job 6678285625 has completed (purged errors)
[2025-06-05 00:21:10] 2025-06-04 22:20:49,003 | INFO     | overall cleanup function is called
[2025-06-05 00:21:10] 2025-06-04 22:20:50,013 | INFO     | --- collectZombieJob: --- 10, [30888]
[2025-06-05 00:21:10] 2025-06-04 22:20:50,014 | INFO     | zombie collector waiting for pid 30888
[2025-06-05 00:21:10] 2025-06-04 22:20:50,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:21:10] 2025-06-04 22:20:50,014 | INFO     | collected zombie processes
[2025-06-05 00:21:10] 2025-06-04 22:20:50,014 | INFO     | will attempt to kill all subprocesses of pid=30888
[2025-06-05 00:21:10] 2025-06-04 22:20:50,113 | INFO     | process IDs to be killed: [30888] (in reverse order)
[2025-06-05 00:21:10] 2025-06-04 22:20:50,204 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:21:10] 2025-06-04 22:20:50,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:21:10] 2025-06-04 22:20:50,208 | INFO     | did not find any defunct processes belonging to 30888
[2025-06-05 00:21:10] 2025-06-04 22:20:50,212 | INFO     | did not find any defunct processes belonging to 30888
[2025-06-05 00:21:10] 2025-06-04 22:20:50,213 | INFO     | ready for new job
[2025-06-05 00:21:10] 2025-06-04 22:20:50,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:21:10] 2025-06-04 22:20:50,215 | INFO     | **************************************
[2025-06-05 00:21:10] 2025-06-04 22:20:50,215 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:21:10] 2025-06-04 22:20:50,215 | INFO     | **************************************
[2025-06-05 00:21:10] 2025-06-04 22:20:50,215 | INFO     | 
[2025-06-05 00:21:10] 2025-06-04 22:20:50,216 | INFO     | pilot is running in a VM
[2025-06-05 00:21:10] 2025-06-04 22:20:50,216 | INFO     | architecture information:
[2025-06-05 00:21:10] 2025-06-04 22:20:50,216 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:21:10] 2025-06-04 22:20:50,344 | INFO     | cat /etc/os-release:
[2025-06-05 00:21:10] NAME="CentOS Linux"
[2025-06-05 00:21:10] VERSION="7 (Core)"
[2025-06-05 00:21:10] ID="centos"
[2025-06-05 00:21:10] ID_LIKE="rhel fedora"
[2025-06-05 00:21:10] VERSION_ID="7"
[2025-06-05 00:21:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:21:10] ANSI_COLOR="0;31"
[2025-06-05 00:21:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:21:10] HOME_URL="https://www.centos.org/"
[2025-06-05 00:21:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:21:10] 
[2025-06-05 00:21:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:21:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:21:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:21:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:21:10] 
[2025-06-05 00:21:10] 2025-06-04 22:20:50,344 | INFO     | **************************************
[2025-06-05 00:21:10] 2025-06-04 22:20:50,848 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-05 00:21:10] 2025-06-04 22:20:50,938 | INFO     | sufficient remaining disk space (497307090944 B)
[2025-06-05 00:21:10] 2025-06-04 22:20:50,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:21:10] 2025-06-04 22:20:50,939 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:21:10] 2025-06-04 22:20:50,939 | INFO     | update_server=False
[2025-06-05 00:21:10] 2025-06-04 22:20:50,939 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:21:10] 2025-06-04 22:20:50,962 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:21:10] 2025-06-04 22:20:50,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:21:10] 2025-06-04 22:20:50,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:21:10] 2025-06-04 22:20:51,404 | INFO     | all data control threads have been joined
[2025-06-05 00:21:10] 2025-06-04 22:20:51,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:21:10] 2025-06-04 22:20:51,791 | INFO     | aborting loop
[2025-06-05 00:21:10] 2025-06-04 22:20:51,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:21:10] 2025-06-04 22:20:51,945 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:52,394 | INFO     | all job control threads have been joined
[2025-06-05 00:21:10] 2025-06-04 22:20:52,399 | INFO     | all payload control threads have been joined
[2025-06-05 00:21:10] 2025-06-04 22:20:52,410 | INFO     | [data] control thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:52,739 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:52,742 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:52,796 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:53,148 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:53,153 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:53,165 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:53,303 | INFO     | [job] validate thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:53,379 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:53,400 | INFO     | [job] control thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:53,405 | INFO     | [payload] control thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:53,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:21:10] 2025-06-04 22:20:53,805 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:53,910 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:21:10] 2025-06-04 22:20:54,768 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:20:57,917 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:21:01,761 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:21:10] 2025-06-04 22:21:02,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:21:10] 2025-06-04 22:21:04,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702473254720)>', '<ExcThread(monitor, started 139702015334144)>']
[2025-06-05 00:21:10] 2025-06-04 22:21:05,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:21:10] 2025-06-04 22:21:05,036 | INFO     | [monitor] control thread has ended
[2025-06-05 00:21:10] 2025-06-04 22:21:09,842 | INFO     | all workflow threads have been joined
[2025-06-05 00:21:10] 2025-06-04 22:21:09,843 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:21:10] 2025-06-04 22:21:09,843 | INFO     | traces error code: 0
[2025-06-05 00:21:10] 2025-06-04 22:21:09,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:21:10] 2025-06-04 22:21:10,148 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:21:10] 2025-06-04 22:21:10,152 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:21:10] 2025-06-04 22:21:10,155 [wrapper] pilotpid: 24327
[2025-06-05 00:21:10] 2025-06-04 22:21:10,160 [wrapper] Pilot exit status: 0
[2025-06-05 00:21:10] 2025-06-04 22:21:10,306 [wrapper] pandaids: 6678285625
[2025-06-05 00:21:10] 2025-06-04 22:21:10,475 [wrapper] cleanup supervisor_pilot 12791 24328
[2025-06-05 00:21:10] 2025-06-04 22:21:10,507 [wrapper] Test setup, not cleaning
[2025-06-05 00:21:10] 2025-06-04 22:21:10,551 [wrapper] apfmon messages muted
[2025-06-05 00:21:10] 2025-06-04 22:21:10,563 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:21:10] 2025-06-04 22:21:10,573 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:21:10]  *** Error codes and diagnostics ***
[2025-06-05 00:21:10]     "exeErrorCode": 0,
[2025-06-05 00:21:10]     "exeErrorDiag": "",
[2025-06-05 00:21:10]     "pilotErrorCode": 0,
[2025-06-05 00:21:10]     "pilotErrorDiag": "",
[2025-06-05 00:21:10]  *** Listing of results directory ***
[2025-06-05 00:21:10] total 389712
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-05 00:21:10] -rwx------. 1 boinc boinc     37140 Jun  4 04:55 runpilot2-wrapper.sh
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc      5111 Jun  4 04:55 queuedata.json
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc       100 Jun  4 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:21:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 20:48 run_atlas
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc       105 Jun  4 20:48 job.xml
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc      6391 Jun  4 20:48 init_data.xml
[2025-06-05 00:21:10] -rw-r--r--. 2 boinc boinc 214668528 Jun  4 20:48 EVNT.45006593._002037.pool.root.1
[2025-06-05 00:21:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:48 start_atlas.sh
[2025-06-05 00:21:10] drwxrwx--x. 2 boinc boinc        68 Jun  4 20:48 shared
[2025-06-05 00:21:10] -rw-r--r--. 2 boinc boinc    508878 Jun  4 20:48 input.tar.gz
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc         0 Jun  4 20:48 boinc_lockfile
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc      2525 Jun  4 20:48 pandaJob.out
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc    990984 Jun  4 20:49 agis_schedconf.cvmfs.json
[2025-06-05 00:21:10] drwx------. 4 boinc boinc      4096 Jun  4 20:49 pilot3
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc       530 Jun  5 00:19 boinc_task_state.xml
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc 177637911 Jun  5 00:19 HITS.45006595._050834.pool.root.1
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc        95 Jun  5 00:20 pilot_heartbeat.json
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc      1019 Jun  5 00:20 memory_monitor_summary.json
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc   1598969 Jun  5 00:20 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc    364955 Jun  5 00:20 log.45006595._050834.job.log.tgz.1
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc      7687 Jun  5 00:20 heartbeat.json
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc      8192 Jun  5 00:21 boinc_mmap_file
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc        28 Jun  5 00:21 wrapper_checkpoint.txt
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc      4488 Jun  5 00:21 pilotlog.txt
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc   1103084 Jun  5 00:21 log.45006595._050834.job.log.1
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc       357 Jun  5 00:21 output.list
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc       620 Jun  5 00:21 runtime_log
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc   1484800 Jun  5 00:21 result.tar.gz
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc      8659 Jun  5 00:21 runtime_log.err
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc       657 Jun  5 00:21 go3LDmQTtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmewmKDmSF2X6m.diag
[2025-06-05 00:21:10] -rw-r--r--. 1 boinc boinc     20706 Jun  5 00:21 stderr.txt
[2025-06-05 00:21:10] HITS file was successfully produced:
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc 177637911 Jun  5 00:19 shared/HITS.pool.root.1
[2025-06-05 00:21:10]  *** Contents of shared directory: ***
[2025-06-05 00:21:10] total 385084
[2025-06-05 00:21:10] -rw-r--r--. 2 boinc boinc 214668528 Jun  4 20:48 ATLAS.root_0
[2025-06-05 00:21:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:48 start_atlas.sh
[2025-06-05 00:21:10] -rw-r--r--. 2 boinc boinc    508878 Jun  4 20:48 input.tar.gz
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc 177637911 Jun  5 00:19 HITS.pool.root.1
[2025-06-05 00:21:10] -rw-------. 1 boinc boinc   1484800 Jun  5 00:21 result.tar.gz
00:21:12 (18643): run_atlas exited; CPU time 47184.911820
00:21:12 (18643): called boinc_finish(0)

</stderr_txt>
]]>

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