Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:51:43 (10709): wrapper (7.7.26015): starting
03:51:43 (10709): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:51:43] Arguments: --nthreads 8
[2025-06-04 03:51:43] Threads: 8
[2025-06-04 03:51:43] Checking for CVMFS
[2025-06-04 03:51:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:51:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:51:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:51:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:51:44] 2.11.2.0 73730 10708 315068 146772 1 229 13593426 18432000 17658 130560 0 87434297 99.399 111928000 72335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 03:51:44] CVMFS is ok
[2025-06-04 03:51:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:51:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:51:44] Further information can be found at the LHC@home message board.
[2025-06-04 03:51:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:51:44] Checking for apptainer binary...
[2025-06-04 03:51:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:51:44] Running /usr/bin/apptainer --version
[2025-06-04 03:51:44] apptainer version 1.3.2-1.el7
[2025-06-04 03:51:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:51:51] c-212-10.aglt2.org
[2025-06-04 03:51:51] apptainer works
[2025-06-04 03:51:51] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:51:51] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:51:51] Starting ATLAS job with PandaID=6678286296
[2025-06-04 03:51:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:27:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:27:45] 2025-06-04 09:26:57,157 | INFO     | monitor loop #420: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:26:57,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:26:58,625 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:27:45] 2025-06-04 09:26:59,662 | INFO     | monitor loop #421: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:26:59,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:01,051 | INFO     | job 6678286296 has state=finished
[2025-06-04 05:27:45] 2025-06-04 09:27:01,051 | INFO     | preparing for final server update for job 6678286296 in state='finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:01,150 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 05:27:45] 2025-06-04 09:27:01,151 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:27:45] 2025-06-04 09:27:01,151 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:27:45] 2025-06-04 09:27:01,151 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:27:45] 2025-06-04 09:27:01,151 | INFO     | job 6678286296 has finished - writing final server update
[2025-06-04 05:27:45] 2025-06-04 09:27:01,151 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:27:45] 2025-06-04 09:27:01,167 | INFO     | executing command: lscpu
[2025-06-04 05:27:45] 2025-06-04 09:27:01,197 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:27:45] 2025-06-04 09:27:02,167 | INFO     | monitor loop #422: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:02,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:03,794 | INFO     | PID=14727 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:27:45] 2025-06-04 09:27:03,794 | INFO     | .. there are 18 such processes running
[2025-06-04 05:27:45] 2025-06-04 09:27:04,676 | INFO     | monitor loop #423: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:04,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:07,183 | INFO     | monitor loop #424: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:07,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:09,688 | INFO     | monitor loop #425: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:09,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:12,193 | INFO     | monitor loop #426: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:12,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:14,700 | INFO     | monitor loop #427: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:14,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:17,205 | INFO     | monitor loop #428: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:17,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:19,712 | INFO     | monitor loop #429: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:19,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:22,220 | INFO     | monitor loop #430: job 0:6678286296 is in state 'finished'
[2025-06-04 05:27:45] 2025-06-04 09:27:22,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:27:45] 2025-06-04 09:27:24,028 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:27:45] 2025-06-04 09:27:24,029 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678286296/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:27:45] 2025-06-04 09:27:24,029 | INFO     | extracted standard info from prmon json
[2025-06-04 05:27:45] 2025-06-04 09:27:24,029 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:27:45] 2025-06-04 09:27:24,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:27:45] 2025-06-04 09:27:24,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:27:45] 2025-06-04 09:27:24,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:27:45] 2025-06-04 09:27:24,031 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:27:45] 2025-06-04 09:27:24,032 | INFO     | sum of square deviations: 183761585.0
[2025-06-04 05:27:45] 2025-06-04 09:27:24,032 | INFO     | sum of deviations: -683911077.0
[2025-06-04 05:27:45] 2025-06-04 09:27:24,032 | INFO     | mean x: 1749026548.5
[2025-06-04 05:27:45] 2025-06-04 09:27:24,032 | INFO     | mean y: 2479652.1904761903
[2025-06-04 05:27:45] 2025-06-04 09:27:24,032 | INFO     | -- intersect: 6511884925.802084
[2025-06-04 05:27:45] 2025-06-04 09:27:24,032 | INFO     | intersect: 6511884925.802084
[2025-06-04 05:27:45] 2025-06-04 09:27:24,032 | INFO     | chi2: 0.0036741956044508643
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | -- intersect: 6511884925.802084
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | current memory leak: -3.72 B/s (using 84 data points, chi2=0.00)
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | ..............................
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | . Timing measurements:
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | . get job = 0 s
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | . initial setup = 4 s
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | . payload setup = 33 s
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | . stage-in = 0 s
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | . payload execution = 5539 s
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | . stage-out = 0 s
[2025-06-04 05:27:45] 2025-06-04 09:27:24,033 | INFO     | . log creation = 0 s
[2025-06-04 05:27:45] 2025-06-04 09:27:24,034 | INFO     | ..............................
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | 
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | job summary report
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | --------------------------------------------------
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | PanDA job id: 6678286296
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | task id: 45006595
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | errors: (none)
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | pilot state: finished 
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | transexitcode: 0
[2025-06-04 05:27:45] 2025-06-04 09:27:24,112 | INFO     | exeerrorcode: 0
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | exeerrordiag: 
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | exitcode: 0
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | exitmsg: OK
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | cpuconsumptiontime: 29554 s
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | nevents: 400
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | neventsw: 0
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | pid: 26265
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | pgrp: 26265
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | corecount: 8
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | event service: False
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | sizes: {0: 2405184, 11: 2405184, 22: 2405212, 27: 2405446, 32: 2405474, 5576: 2431991, 5578: 2440932, 5581: 2440988, 5606: 2441158}
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | --------------------------------------------------
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | 
[2025-06-04 05:27:45] 2025-06-04 09:27:24,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 05:27:45] 2025-06-04 09:27:24,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:27:45] 2025-06-04 09:27:24,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,345 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:27:45] 2025-06-04 09:27:24,345 | INFO     | job 6678286296 has completed (purged errors)
[2025-06-04 05:27:45] 2025-06-04 09:27:24,345 | INFO     | overall cleanup function is called
[2025-06-04 05:27:45] 2025-06-04 09:27:25,357 | INFO     | --- collectZombieJob: --- 10, [26265]
[2025-06-04 05:27:45] 2025-06-04 09:27:25,357 | INFO     | zombie collector waiting for pid 26265
[2025-06-04 05:27:45] 2025-06-04 09:27:25,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:27:45] 2025-06-04 09:27:25,357 | INFO     | collected zombie processes
[2025-06-04 05:27:45] 2025-06-04 09:27:25,358 | INFO     | will attempt to kill all subprocesses of pid=26265
[2025-06-04 05:27:45] 2025-06-04 09:27:25,654 | INFO     | process IDs to be killed: [26265] (in reverse order)
[2025-06-04 05:27:45] 2025-06-04 09:27:26,138 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:27:45] 2025-06-04 09:27:26,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:27:45] 2025-06-04 09:27:26,165 | INFO     | did not find any defunct processes belonging to 26265
[2025-06-04 05:27:45] 2025-06-04 09:27:26,204 | INFO     | did not find any defunct processes belonging to 26265
[2025-06-04 05:27:45] 2025-06-04 09:27:26,204 | INFO     | ready for new job
[2025-06-04 05:27:45] 2025-06-04 09:27:26,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:27:45] 2025-06-04 09:27:26,206 | INFO     | **************************************
[2025-06-04 05:27:45] 2025-06-04 09:27:26,206 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:27:45] 2025-06-04 09:27:26,206 | INFO     | **************************************
[2025-06-04 05:27:45] 2025-06-04 09:27:26,206 | INFO     | 
[2025-06-04 05:27:45] 2025-06-04 09:27:26,216 | INFO     | architecture information:
[2025-06-04 05:27:45] 2025-06-04 09:27:26,226 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:27:45] 2025-06-04 09:27:26,340 | INFO     | cat /etc/os-release:
[2025-06-04 05:27:45] NAME="CentOS Linux"
[2025-06-04 05:27:45] VERSION="7 (Core)"
[2025-06-04 05:27:45] ID="centos"
[2025-06-04 05:27:45] ID_LIKE="rhel fedora"
[2025-06-04 05:27:45] VERSION_ID="7"
[2025-06-04 05:27:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:27:45] ANSI_COLOR="0;31"
[2025-06-04 05:27:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:27:45] HOME_URL="https://www.centos.org/"
[2025-06-04 05:27:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:27:45] 
[2025-06-04 05:27:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:27:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:27:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:27:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:27:45] 
[2025-06-04 05:27:45] 2025-06-04 09:27:26,341 | INFO     | **************************************
[2025-06-04 05:27:45] 2025-06-04 09:27:26,377 | INFO     | PID=14727 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:27:45] 2025-06-04 09:27:26,378 | INFO     | .. there are 18 such processes running
[2025-06-04 05:27:45] 2025-06-04 09:27:26,843 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 05:27:45] 2025-06-04 09:27:27,049 | INFO     | sufficient remaining disk space (103969456128 B)
[2025-06-04 05:27:45] 2025-06-04 09:27:27,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:27:45] 2025-06-04 09:27:27,049 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:27:45] 2025-06-04 09:27:27,049 | INFO     | update_server=False
[2025-06-04 05:27:45] 2025-06-04 09:27:27,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:27:45] 2025-06-04 09:27:27,049 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:27:45] 2025-06-04 09:27:27,050 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:27:45] 2025-06-04 09:27:27,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:27:45] 2025-06-04 09:27:27,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:27:45] 2025-06-04 09:27:27,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:27:45] 2025-06-04 09:27:27,237 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 05:27:45] 2025-06-04 09:27:27,237 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 05:27:45] 2025-06-04 09:27:27,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:27:45] 2025-06-04 09:27:27,237 | INFO     | will abort loop
[2025-06-04 05:27:45] 2025-06-04 09:27:27,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:27:45] 2025-06-04 09:27:27,305 | INFO     | all data control threads have been joined
[2025-06-04 05:27:45] 2025-06-04 09:27:27,658 | INFO     | all job control threads have been joined
[2025-06-04 05:27:45] 2025-06-04 09:27:27,772 | INFO     | all payload control threads have been joined
[2025-06-04 05:27:45] 2025-06-04 09:27:28,056 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:28,133 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:28,242 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:28,311 | INFO     | [data] control thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:28,320 | INFO     | [job] validate thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:28,664 | INFO     | [job] control thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:28,778 | INFO     | [payload] control thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:28,845 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:28,849 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:28,892 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:29,026 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:29,057 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:29,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:27:45] 2025-06-04 09:27:29,169 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:30,132 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:31,290 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:37,339 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:27:45] 2025-06-04 09:27:38,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:27:45] 2025-06-04 09:27:38,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223732651840)>', '<ExcThread(monitor, started 140223149233920)>']
[2025-06-04 05:27:45] 2025-06-04 09:27:39,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:27:45] 2025-06-04 09:27:39,137 | INFO     | [monitor] control thread has ended
[2025-06-04 05:27:45] 2025-06-04 09:27:43,798 | INFO     | all workflow threads have been joined
[2025-06-04 05:27:45] 2025-06-04 09:27:43,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:27:45] 2025-06-04 09:27:43,798 | INFO     | traces error code: 0
[2025-06-04 05:27:45] 2025-06-04 09:27:43,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:27:45] 2025-06-04 09:27:45,070 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:27:45] 2025-06-04 09:27:45,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:27:45] 2025-06-04 09:27:45,074 [wrapper] pilotpid: 14727
[2025-06-04 05:27:45] 2025-06-04 09:27:45,076 [wrapper] Pilot exit status: 0
[2025-06-04 05:27:45] 2025-06-04 09:27:45,086 [wrapper] pandaids: 6678286296
[2025-06-04 05:27:45] 2025-06-04 09:27:45,150 [wrapper] cleanup supervisor_pilot 46042 14728
[2025-06-04 05:27:45] 2025-06-04 09:27:45,153 [wrapper] Test setup, not cleaning
[2025-06-04 05:27:45] 2025-06-04 09:27:45,155 [wrapper] apfmon messages muted
[2025-06-04 05:27:45] 2025-06-04 09:27:45,157 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:27:45] 2025-06-04 09:27:45,159 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:27:45]  *** Error codes and diagnostics ***
[2025-06-04 05:27:45]     "exeErrorCode": 0,
[2025-06-04 05:27:45]     "exeErrorDiag": "",
[2025-06-04 05:27:45]     "pilotErrorCode": 0,
[2025-06-04 05:27:45]     "pilotErrorDiag": "",
[2025-06-04 05:27:45]  *** Listing of results directory ***
[2025-06-04 05:27:45] total 390608
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:04 queuedata.json
[2025-06-04 05:27:45] -rwx------ 1 boincer umatlas     37140 Jun  3 23:05 runpilot2-wrapper.sh
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 03:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:27:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 03:51 run_atlas
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 03:51 job.xml
[2025-06-04 05:27:45] -rw-r--r-- 2 boincer umatlas 214780696 Jun  4 03:51 EVNT.45006593._002052.pool.root.1
[2025-06-04 05:27:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:51 start_atlas.sh
[2025-06-04 05:27:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 03:51 shared
[2025-06-04 05:27:45] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 03:51 input.tar.gz
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 03:51 boinc_lockfile
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 03:51 pandaJob.out
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas    986745 Jun  4 03:52 agis_schedconf.cvmfs.json
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas   1603667 Jun  4 03:52 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:27:45] drwx------ 4 boincer umatlas      4096 Jun  4 03:52 pilot3
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 05:20 init_data.xml
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas 179647281 Jun  4 05:26 HITS.45006595._051224.pool.root.1
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas       529 Jun  4 05:26 boinc_task_state.xml
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas        95 Jun  4 05:26 pilot_heartbeat.json
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas      1071 Jun  4 05:26 memory_monitor_summary.json
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas    324636 Jun  4 05:26 log.45006595._051224.job.log.tgz.1
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas      7742 Jun  4 05:27 heartbeat.json
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:27 wrapper_checkpoint.txt
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas      5128 Jun  4 05:27 pilotlog.txt
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:27 boinc_mmap_file
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas    535895 Jun  4 05:27 log.45006595._051224.job.log.1
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas       357 Jun  4 05:27 output.list
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:27 runtime_log
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas    880640 Jun  4 05:27 result.tar.gz
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 05:27 runtime_log.err
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas       658 Jun  4 05:27 dpIMDmNctg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9zmKDmGEKtdm.diag
[2025-06-04 05:27:45] -rw-r--r-- 1 boincer umatlas     22314 Jun  4 05:27 stderr.txt
[2025-06-04 05:27:45] HITS file was successfully produced:
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas 179647281 Jun  4 05:26 shared/HITS.pool.root.1
[2025-06-04 05:27:45]  *** Contents of shared directory: ***
[2025-06-04 05:27:45] total 386568
[2025-06-04 05:27:45] -rw-r--r-- 2 boincer umatlas 214780696 Jun  4 03:51 ATLAS.root_0
[2025-06-04 05:27:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 03:51 start_atlas.sh
[2025-06-04 05:27:45] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 03:51 input.tar.gz
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas 179647281 Jun  4 05:26 HITS.pool.root.1
[2025-06-04 05:27:45] -rw------- 1 boincer umatlas    880640 Jun  4 05:27 result.tar.gz
05:27:46 (10709): run_atlas exited; CPU time 29306.548912
05:27:46 (10709): called boinc_finish(0)

</stderr_txt>
]]>

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