Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:06:32 (14208): wrapper (7.7.26015): starting
04:06:32 (14208): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 04:06:32] Arguments: --nthreads 12
[2025-06-04 04:06:32] Threads: 12
[2025-06-04 04:06:32] Checking for CVMFS
[2025-06-04 04:06:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:06:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:06:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:06:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:06:32] 2.11.2.0 3087 35375 88404 146772 2 56 12701980 20275201 1 130560 0 16081554 99.986 5739337 7098 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 04:06:32] CVMFS is ok
[2025-06-04 04:06:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:06:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:06:32] Further information can be found at the LHC@home message board.
[2025-06-04 04:06:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:06:32] Checking for apptainer binary...
[2025-06-04 04:06:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:06:32] Running /usr/bin/apptainer --version
[2025-06-04 04:06:32] apptainer version 1.3.2-1.el7
[2025-06-04 04:06:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:06:34] c-115-42.aglt2.org
[2025-06-04 04:06:34] apptainer works
[2025-06-04 04:06:34] Set ATHENA_PROC_NUMBER=12
[2025-06-04 04:06:34] Set ATHENA_CORE_NUMBER=12
[2025-06-04 04:06:34] Starting ATLAS job with PandaID=6678286421
[2025-06-04 04:06:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:06:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:06:19]  filetype=log
[2025-06-04 05:06:19]  guid=7aa7e36e-67ae-44d5-a857-afd5b54c8e3a
[2025-06-04 05:06:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 05:06:19]  is_altstaged=None
[2025-06-04 05:06:19]  is_tar=False
[2025-06-04 05:06:19]  lfn=log.45006595._051349.job.log.tgz.1
[2025-06-04 05:06:19]  mtime=0
[2025-06-04 05:06:19]  protocol_id=None
[2025-06-04 05:06:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:06:19]  replicas=None
[2025-06-04 05:06:19]  scope=mc23_13p6TeV
[2025-06-04 05:06:19]  status=None
[2025-06-04 05:06:19]  status_code=0
[2025-06-04 05:06:19]  storage_token=
[2025-06-04 05:06:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678286421/log.45006595._051349.job.log.tgz.1
[2025-06-04 05:06:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/97/log.45006595._051349.job.log.tgz.1
[2025-06-04 05:06:19]  workdir=None
[2025-06-04 05:06:19] ]
[2025-06-04 05:06:19] 2025-06-04 09:05:53,506 | INFO     | transferring file log.45006595._051349.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678286421/log.45006595._051349.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:06:19] 2025-06-04 09:05:53,506 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678286421/log.45006595._051349.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._051349.job
[2025-06-04 05:06:19] 2025-06-04 09:05:53,528 | INFO     | adding to output.list: log.45006595._051349.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/97/log.45006595._051349.job.log.tg
[2025-06-04 05:06:19] 2025-06-04 09:05:53,529 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:06:19] 2025-06-04 09:05:53,529 | INFO     | summary of transferred files:
[2025-06-04 05:06:19] 2025-06-04 09:05:53,529 | INFO     |  -- lfn=log.45006595._051349.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:06:19] 2025-06-04 09:05:53,530 | INFO     | stage-out finished correctly
[2025-06-04 05:06:19] 2025-06-04 09:05:53,607 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:06:19] 2025-06-04 09:05:54,570 | INFO     | job 6678286421 has state=finished
[2025-06-04 05:06:19] 2025-06-04 09:05:54,570 | INFO     | preparing for final server update for job 6678286421 in state='finished'
[2025-06-04 05:06:19] 2025-06-04 09:05:54,627 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 05:06:19] 2025-06-04 09:05:54,627 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:06:19] 2025-06-04 09:05:54,627 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:06:19] 2025-06-04 09:05:54,627 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:06:19] 2025-06-04 09:05:54,627 | INFO     | job 6678286421 has finished - writing final server update
[2025-06-04 05:06:19] 2025-06-04 09:05:54,627 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:06:19] 2025-06-04 09:05:54,629 | INFO     | executing command: lscpu
[2025-06-04 05:06:19] 2025-06-04 09:05:54,655 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:06:19] 2025-06-04 09:05:55,812 | INFO     | monitor loop #269: job 0:6678286421 is in state 'finished'
[2025-06-04 05:06:19] 2025-06-04 09:05:55,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:06:19] 2025-06-04 09:05:58,324 | INFO     | monitor loop #270: job 0:6678286421 is in state 'finished'
[2025-06-04 05:06:19] 2025-06-04 09:05:58,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:06:19] 2025-06-04 09:05:59,359 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 05:06:19] 2025-06-04 09:05:59,359 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286421/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:06:19] 2025-06-04 09:05:59,360 | INFO     | extracted standard info from prmon json
[2025-06-04 05:06:19] 2025-06-04 09:05:59,360 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:06:19] 2025-06-04 09:05:59,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:06:19] 2025-06-04 09:05:59,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:06:19] 2025-06-04 09:05:59,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:06:19] 2025-06-04 09:05:59,363 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:06:19] 2025-06-04 09:05:59,363 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 05:06:19] 2025-06-04 09:05:59,364 | INFO     | sum of deviations: -1238224116.0
[2025-06-04 05:06:19] 2025-06-04 09:05:59,364 | INFO     | mean x: 1749026267.0
[2025-06-04 05:06:19] 2025-06-04 09:05:59,364 | INFO     | mean y: 2707583.0392156863
[2025-06-04 05:06:19] 2025-06-04 09:05:59,364 | INFO     | -- intersect: 52673959613.932846
[2025-06-04 05:06:19] 2025-06-04 09:05:59,364 | INFO     | intersect: 52673959613.932846
[2025-06-04 05:06:19] 2025-06-04 09:05:59,365 | INFO     | chi2: 0.03136581013397632
[2025-06-04 05:06:19] 2025-06-04 09:05:59,365 | INFO     | -- intersect: 52673959613.932846
[2025-06-04 05:06:19] 2025-06-04 09:05:59,365 | INFO     | current memory leak: -30.11 B/s (using 51 data points, chi2=0.03)
[2025-06-04 05:06:19] 2025-06-04 09:05:59,365 | INFO     | ..............................
[2025-06-04 05:06:19] 2025-06-04 09:05:59,365 | INFO     | . Timing measurements:
[2025-06-04 05:06:19] 2025-06-04 09:05:59,365 | INFO     | . get job = 0 s
[2025-06-04 05:06:19] 2025-06-04 09:05:59,365 | INFO     | . initial setup = 2 s
[2025-06-04 05:06:19] 2025-06-04 09:05:59,366 | INFO     | . payload setup = 9 s
[2025-06-04 05:06:19] 2025-06-04 09:05:59,366 | INFO     | . stage-in = 0 s
[2025-06-04 05:06:19] 2025-06-04 09:05:59,366 | INFO     | . payload execution = 3517 s
[2025-06-04 05:06:19] 2025-06-04 09:05:59,366 | INFO     | . stage-out = 0 s
[2025-06-04 05:06:19] 2025-06-04 09:05:59,366 | INFO     | . log creation = 0 s
[2025-06-04 05:06:19] 2025-06-04 09:05:59,366 | INFO     | ..............................
[2025-06-04 05:06:19] 2025-06-04 09:05:59,442 | INFO     | 
[2025-06-04 05:06:19] 2025-06-04 09:05:59,442 | INFO     | job summary report
[2025-06-04 05:06:19] 2025-06-04 09:05:59,443 | INFO     | --------------------------------------------------
[2025-06-04 05:06:19] 2025-06-04 09:05:59,443 | INFO     | PanDA job id: 6678286421
[2025-06-04 05:06:19] 2025-06-04 09:05:59,443 | INFO     | task id: 45006595
[2025-06-04 05:06:19] 2025-06-04 09:05:59,443 | INFO     | errors: (none)
[2025-06-04 05:06:19] 2025-06-04 09:05:59,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:06:19] 2025-06-04 09:05:59,443 | INFO     | pilot state: finished 
[2025-06-04 05:06:19] 2025-06-04 09:05:59,444 | INFO     | transexitcode: 0
[2025-06-04 05:06:19] 2025-06-04 09:05:59,444 | INFO     | exeerrorcode: 0
[2025-06-04 05:06:19] 2025-06-04 09:05:59,444 | INFO     | exeerrordiag: 
[2025-06-04 05:06:19] 2025-06-04 09:05:59,444 | INFO     | exitcode: 0
[2025-06-04 05:06:19] 2025-06-04 09:05:59,444 | INFO     | exitmsg: OK
[2025-06-04 05:06:19] 2025-06-04 09:05:59,444 | INFO     | cpuconsumptiontime: 37745 s
[2025-06-04 05:06:19] 2025-06-04 09:05:59,444 | INFO     | nevents: 400
[2025-06-04 05:06:19] 2025-06-04 09:05:59,444 | INFO     | neventsw: 0
[2025-06-04 05:06:19] 2025-06-04 09:05:59,444 | INFO     | pid: 24326
[2025-06-04 05:06:19] 2025-06-04 09:05:59,445 | INFO     | pgrp: 24326
[2025-06-04 05:06:19] 2025-06-04 09:05:59,445 | INFO     | corecount: 12
[2025-06-04 05:06:19] 2025-06-04 09:05:59,445 | INFO     | event service: False
[2025-06-04 05:06:19] 2025-06-04 09:05:59,445 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 3530: 2431014, 3531: 2440139, 3537: 2440253}
[2025-06-04 05:06:19] 2025-06-04 09:05:59,445 | INFO     | --------------------------------------------------
[2025-06-04 05:06:19] 2025-06-04 09:05:59,445 | INFO     | 
[2025-06-04 05:06:19] 2025-06-04 09:05:59,445 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:06:19] 2025-06-04 09:05:59,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,471 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:06:19] 2025-06-04 09:05:59,471 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,471 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:06:19] 2025-06-04 09:05:59,471 | INFO     | job 6678286421 has completed (purged errors)
[2025-06-04 05:06:19] 2025-06-04 09:05:59,472 | INFO     | overall cleanup function is called
[2025-06-04 05:06:19] 2025-06-04 09:06:00,480 | INFO     | --- collectZombieJob: --- 10, [24326]
[2025-06-04 05:06:19] 2025-06-04 09:06:00,480 | INFO     | zombie collector waiting for pid 24326
[2025-06-04 05:06:19] 2025-06-04 09:06:00,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:06:19] 2025-06-04 09:06:00,480 | INFO     | collected zombie processes
[2025-06-04 05:06:19] 2025-06-04 09:06:00,481 | INFO     | will attempt to kill all subprocesses of pid=24326
[2025-06-04 05:06:19] 2025-06-04 09:06:00,565 | INFO     | process IDs to be killed: [24326] (in reverse order)
[2025-06-04 05:06:19] 2025-06-04 09:06:00,617 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:06:19] 2025-06-04 09:06:00,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:06:19] 2025-06-04 09:06:00,620 | INFO     | did not find any defunct processes belonging to 24326
[2025-06-04 05:06:19] 2025-06-04 09:06:00,624 | INFO     | did not find any defunct processes belonging to 24326
[2025-06-04 05:06:19] 2025-06-04 09:06:00,624 | INFO     | ready for new job
[2025-06-04 05:06:19] 2025-06-04 09:06:00,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:06:19] 2025-06-04 09:06:00,625 | INFO     | **************************************
[2025-06-04 05:06:19] 2025-06-04 09:06:00,626 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:06:19] 2025-06-04 09:06:00,626 | INFO     | **************************************
[2025-06-04 05:06:19] 2025-06-04 09:06:00,626 | INFO     | 
[2025-06-04 05:06:19] 2025-06-04 09:06:00,626 | INFO     | architecture information:
[2025-06-04 05:06:19] 2025-06-04 09:06:00,627 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:06:19] 2025-06-04 09:06:00,641 | INFO     | cat /etc/os-release:
[2025-06-04 05:06:19] NAME="CentOS Linux"
[2025-06-04 05:06:19] VERSION="7 (Core)"
[2025-06-04 05:06:19] ID="centos"
[2025-06-04 05:06:19] ID_LIKE="rhel fedora"
[2025-06-04 05:06:19] VERSION_ID="7"
[2025-06-04 05:06:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:06:19] ANSI_COLOR="0;31"
[2025-06-04 05:06:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:06:19] HOME_URL="https://www.centos.org/"
[2025-06-04 05:06:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:06:19] 
[2025-06-04 05:06:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:06:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:06:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:06:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:06:19] 
[2025-06-04 05:06:19] 2025-06-04 09:06:00,641 | INFO     | **************************************
[2025-06-04 05:06:19] 2025-06-04 09:06:01,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:06:19] 2025-06-04 09:06:01,173 | INFO     | sufficient remaining disk space (18633195520 B)
[2025-06-04 05:06:19] 2025-06-04 09:06:01,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:06:19] 2025-06-04 09:06:01,174 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:06:19] 2025-06-04 09:06:01,174 | INFO     | update_server=False
[2025-06-04 05:06:19] 2025-06-04 09:06:01,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:06:19] 2025-06-04 09:06:01,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:06:19] 2025-06-04 09:06:01,260 | INFO     | all data control threads have been joined
[2025-06-04 05:06:19] 2025-06-04 09:06:01,388 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:06:19] 2025-06-04 09:06:01,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:06:19] 2025-06-04 09:06:01,389 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:06:19] 2025-06-04 09:06:01,460 | INFO     | all job control threads have been joined
[2025-06-04 05:06:19] 2025-06-04 09:06:01,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:06:19] 2025-06-04 09:06:01,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:06:19] 2025-06-04 09:06:01,833 | INFO     | aborting loop
[2025-06-04 05:06:19] 2025-06-04 09:06:02,179 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:02,180 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:02,265 | INFO     | [data] control thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:02,465 | INFO     | [job] control thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:02,617 | INFO     | all payload control threads have been joined
[2025-06-04 05:06:19] 2025-06-04 09:06:02,741 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:02,750 | INFO     | [job] validate thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:02,838 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:02,880 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:03,324 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:03,325 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:03,385 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:03,452 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:03,622 | INFO     | [payload] control thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:03,623 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:04,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:06:19] 2025-06-04 09:06:08,194 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:11,693 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:06:19] 2025-06-04 09:06:12,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:06:19] 2025-06-04 09:06:14,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039628150592)>', '<ExcThread(monitor, started 140038725682944)>']
[2025-06-04 05:06:19] 2025-06-04 09:06:14,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:06:19] 2025-06-04 09:06:14,450 | INFO     | [monitor] control thread has ended
[2025-06-04 05:06:19] 2025-06-04 09:06:19,058 | INFO     | all workflow threads have been joined
[2025-06-04 05:06:19] 2025-06-04 09:06:19,058 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:06:19] 2025-06-04 09:06:19,063 | INFO     | traces error code: 0
[2025-06-04 05:06:19] 2025-06-04 09:06:19,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:06:19] 2025-06-04 09:06:19,151 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:06:19] 2025-06-04 09:06:19,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:06:19] 2025-06-04 09:06:19,158 [wrapper] pilotpid: 17798
[2025-06-04 05:06:19] 2025-06-04 09:06:19,162 [wrapper] Pilot exit status: 0
[2025-06-04 05:06:19] 2025-06-04 09:06:19,177 [wrapper] pandaids: 6678286421
[2025-06-04 05:06:19] 2025-06-04 09:06:19,214 [wrapper] cleanup supervisor_pilot 14079 17799
[2025-06-04 05:06:19] 2025-06-04 09:06:19,218 [wrapper] Test setup, not cleaning
[2025-06-04 05:06:19] 2025-06-04 09:06:19,222 [wrapper] apfmon messages muted
[2025-06-04 05:06:19] 2025-06-04 09:06:19,225 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:06:19] 2025-06-04 09:06:19,228 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:06:19]  *** Error codes and diagnostics ***
[2025-06-04 05:06:19]     "exeErrorCode": 0,
[2025-06-04 05:06:19]     "exeErrorDiag": "",
[2025-06-04 05:06:19]     "pilotErrorCode": 0,
[2025-06-04 05:06:19]     "pilotErrorDiag": "",
[2025-06-04 05:06:19]  *** Listing of results directory ***
[2025-06-04 05:06:19] total 395208
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:13 queuedata.json
[2025-06-04 05:06:19] -rwx------ 1 boincer umatlas     37140 Jun  3 23:13 runpilot2-wrapper.sh
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas       100 Jun  4 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:06:19] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 04:06 run_atlas
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas       105 Jun  4 04:06 job.xml
[2025-06-04 05:06:19] -rw-r--r-- 2 boincer umatlas 216580658 Jun  4 04:06 EVNT.45006593._002057.pool.root.1
[2025-06-04 05:06:19] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:06 start_atlas.sh
[2025-06-04 05:06:19] drwxrwx--x 2 boincer umatlas      4096 Jun  4 04:06 shared
[2025-06-04 05:06:19] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 04:06 input.tar.gz
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas         0 Jun  4 04:06 boinc_lockfile
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 04:06 pandaJob.out
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas    986745 Jun  4 04:06 agis_schedconf.cvmfs.json
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas   1603667 Jun  4 04:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:06:19] drwx------ 4 boincer umatlas      4096 Jun  4 04:06 pilot3
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 05:02 init_data.xml
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas 182851419 Jun  4 05:05 HITS.45006595._051349.pool.root.1
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas        95 Jun  4 05:05 pilot_heartbeat.json
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas       529 Jun  4 05:05 boinc_task_state.xml
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas      1049 Jun  4 05:05 memory_monitor_summary.json
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas    361771 Jun  4 05:05 log.45006595._051349.job.log.tgz.1
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas      7748 Jun  4 05:05 heartbeat.json
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 05:06 boinc_mmap_file
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas        27 Jun  4 05:06 wrapper_checkpoint.txt
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas      4425 Jun  4 05:06 pilotlog.txt
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas    352014 Jun  4 05:06 log.45006595._051349.job.log.1
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas       357 Jun  4 05:06 output.list
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas       620 Jun  4 05:06 runtime_log
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas    737280 Jun  4 05:06 result.tar.gz
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 05:06 runtime_log.err
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas       659 Jun  4 05:06 k86MDmWktg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBbaKDmJfw4Fn.diag
[2025-06-04 05:06:19] -rw-r--r-- 1 boincer umatlas     21147 Jun  4 05:06 stderr.txt
[2025-06-04 05:06:19] HITS file was successfully produced:
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas 182851419 Jun  4 05:05 shared/HITS.pool.root.1
[2025-06-04 05:06:19]  *** Contents of shared directory: ***
[2025-06-04 05:06:19] total 391312
[2025-06-04 05:06:19] -rw-r--r-- 2 boincer umatlas 216580658 Jun  4 04:06 ATLAS.root_0
[2025-06-04 05:06:19] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 04:06 start_atlas.sh
[2025-06-04 05:06:19] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 04:06 input.tar.gz
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas 182851419 Jun  4 05:05 HITS.pool.root.1
[2025-06-04 05:06:19] -rw------- 1 boincer umatlas    737280 Jun  4 05:06 result.tar.gz
05:06:20 (14208): run_atlas exited; CPU time 37737.959799
05:06:20 (14208): called boinc_finish(0)

</stderr_txt>
]]>

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