Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 17:33:51 (26108): Detected: vboxwrapper 26206
2025-06-04 17:33:51 (26108): Detected: BOINC client v8.0.2
2025-06-04 17:33:51 (26108): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-04 17:33:52 (26108): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 17:33:52 (26108): Create VM. (boinc_1bd361f0eab84d6c, slot#3)
2025-06-04 17:33:53 (26108): Setting Memory Size for VM. (4700MB)
2025-06-04 17:33:53 (26108): Setting CPU Count for VM. (7)
2025-06-04 17:33:53 (26108): Setting Chipset Options for VM.
2025-06-04 17:33:53 (26108): Setting Graphics Controller Options for VM.
2025-06-04 17:33:54 (26108): Setting Boot Options for VM.
2025-06-04 17:33:54 (26108): Setting Network Configuration for NAT.
2025-06-04 17:33:54 (26108): Enabling VM Network Access.
2025-06-04 17:33:55 (26108): Disabling USB Support for VM.
2025-06-04 17:33:55 (26108): Disabling COM Port Support for VM.
2025-06-04 17:33:55 (26108): Disabling LPT Port Support for VM.
2025-06-04 17:33:55 (26108): Disabling Audio Support for VM.
2025-06-04 17:33:56 (26108): Disabling Clipboard Support for VM.
2025-06-04 17:33:56 (26108): Disabling Drag and Drop Support for VM.
2025-06-04 17:33:56 (26108): Adding storage controller(s) to VM.
2025-06-04 17:33:56 (26108): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 17:33:57 (26108): Adding VirtualBox Guest Additions to VM.
2025-06-04 17:33:57 (26108): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 17:33:57 (26108): forwarding host port 59514 to guest port 80
2025-06-04 17:33:58 (26108): Enabling remote desktop for VM.
2025-06-04 17:33:58 (26108): Required extension pack not installed, remote desktop not enabled.
2025-06-04 17:33:58 (26108): Enabling shared directory for VM.
2025-06-04 17:33:58 (26108): Starting VM using VBoxManage interface. (boinc_1bd361f0eab84d6c, slot#3)
2025-06-04 17:34:02 (26108): Successfully started VM. (PID = '16816')
2025-06-04 17:34:02 (26108): Reporting VM Process ID to BOINC.
2025-06-04 17:34:02 (26108): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-04 17:34:02 (26108): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 17:34:02 (26108): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 17:34:02 (26108): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 17:34:02 (26108): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 17:34:02 (26108): Detected: Web Application Enabled (http://localhost:59514)
2025-06-04 17:34:02 (26108): Preference change detected
2025-06-04 17:34:02 (26108): Setting CPU throttle for VM. (100%)
2025-06-04 17:34:03 (26108): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 17:34:04 (26108): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 17:34:04 (26108): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 17:34:07 (26108): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 17:34:07 (26108): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 17:34:07 (26108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 17:34:13 (26108): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 17:34:13 (26108): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 17:34:17 (26108): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 17:34:17 (26108): Guest Log: 00:00:00.000157 main     Log opened 2025-06-04T17:34:15.099292000Z
2025-06-04 17:34:17 (26108): Guest Log: 00:00:00.000241 main     OS Product: Linux
2025-06-04 17:34:17 (26108): Guest Log: 00:00:00.000303 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 17:34:17 (26108): Guest Log: 00:00:00.000332 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 17:34:17 (26108): Guest Log: 00:00:00.000357 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 17:34:17 (26108): Guest Log: 00:00:00.000357 main     Process ID: 1357
2025-06-04 17:34:17 (26108): Guest Log: 00:00:00.000358 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 17:34:17 (26108): Guest Log: 00:00:00.001126 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 17:34:17 (26108): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 17:34:17 (26108): Guest Log: [INFO] Mounting shared directory
2025-06-04 17:34:17 (26108): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 17:34:22 (26108): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 17:34:22 (26108): Guest Log: [INFO] Detected branch: prod
2025-06-04 17:34:22 (26108): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 17:34:22 (26108): Guest Log: Copying input files
2025-06-04 17:34:23 (26108): Guest Log: Copied input files into RunAtlas.
2025-06-04 17:34:23 (26108): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 17:34:23 (26108): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 17:34:23 (26108): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 17:34:23 (26108): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 17:34:27 (26108): Guest Log: 00:00:10.007055 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 062 381 000ns (GuestNow=1 749 026 067 038 888 000 ns GuestLast=1 749 058 455 101 269 000 ns fSetTimeLastLoop=true )
2025-06-04 17:34:32 (26108): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 17:34:33 (26108): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 17:34:33 (26108): Guest Log: 2.6.3.0 1633 0 32216 146773 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 17:34:33 (26108): Guest Log: copied the webapp to /var/www
2025-06-04 17:34:33 (26108): Guest Log: ATHENA_PROC_NUMBER=7
2025-06-04 17:34:33 (26108): Guest Log: ATHENA_CORE_NUMBER=7
2025-06-04 17:34:33 (26108): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 17:34:33 (26108): Guest Log:  *** Starting ATLAS job. (PandaID=6678286271 taskID=45006595) ***
2025-06-04 18:17:19 (26108): Guest Log:  *** Job finished ***
2025-06-04 18:17:19 (26108): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:03,767 | INFO     | [data] queue_monitor thread has finished
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:09,565 | INFO     | job.realtimelogging is not enabled
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:10,566 | INFO     | [payload] run_realtimelog thread has finished
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:12,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140634549245760)>', '<ExcThread(monitor, started 140633587046144)>']
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:12,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:12,871 | INFO     | [monitor] control thread has ended
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,141 | INFO     | all workflow threads have been joined
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,141 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,141 | INFO     | traces error code: 0
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,195 [wrapper] ==== pilot stdout END ====
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,199 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,202 [wrapper] pilotpid: 5974
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,206 [wrapper] Pilot exit status: 0
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,286 [wrapper] pandaids: 6678286271
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,312 [wrapper] cleanup supervisor_pilot 19338 5975
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,318 [wrapper] Test setup, not cleaning
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,322 [wrapper] apfmon messages muted
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,325 [wrapper] ==== wrapper stdout END ====
2025-06-04 18:17:19 (26108): Guest Log: 2025-06-04 09:17:17,329 [wrapper] ==== wrapper stderr END ====
2025-06-04 18:17:19 (26108): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 18:17:19 (26108): Guest Log:     "exeErrorCode": 0,
2025-06-04 18:17:19 (26108): Guest Log:     "exeErrorDiag": "",
2025-06-04 18:17:19 (26108): Guest Log:     "pilotErrorCode": 0,
2025-06-04 18:17:19 (26108): Guest Log:     "pilotErrorDiag": "",
2025-06-04 18:17:19 (26108): Guest Log:  *** Listing of results directory ***
2025-06-04 18:17:19 (26108): Guest Log: total 183316
2025-06-04 18:17:19 (26108): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 02:52 pilot3.tar.gz
2025-06-04 18:17:19 (26108): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 03:04 queuedata.json
2025-06-04 18:17:19 (26108): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 03:05 runpilot2-wrapper.sh
2025-06-04 18:17:19 (26108): Guest Log: -rwxr-xr-x. 1 atlas atlas      9421 Jun  4 08:34 init_data.xml
2025-06-04 18:17:19 (26108): Guest Log: -rwxr-xr-x. 1 atlas atlas    508879 Jun  4 08:34 input.tar.gz
2025-06-04 18:17:19 (26108): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 08:34 start_atlas.sh
2025-06-04 18:17:19 (26108): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 08:34 EVNT.45006593._002051.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 18:17:19 (26108): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 08:34 pandaJob.out
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas    986774 Jun  4 08:35 agis_schedconf.cvmfs.json
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  4 08:35 agis_ddmendpoints.agis.ALL.json
2025-06-04 18:17:19 (26108): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 08:35 pilot3
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 09:16 pilot_heartbeat.json
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas 182919364 Jun  4 09:16 HITS.45006595._051199.pool.root.1
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas      1028 Jun  4 09:16 memory_monitor_summary.json
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas    271502 Jun  4 09:16 log.45006595._051199.job.log.tgz.1
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas      7678 Jun  4 09:16 heartbeat.json
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas      4794 Jun  4 09:17 pilotlog.txt
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas    245234 Jun  4 09:17 log.45006595._051199.job.log.1
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 09:17 output.list
2025-06-04 18:17:19 (26108): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 09:17 runtime_log
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas    532480 Jun  4 09:17 result.tar.gz
2025-06-04 18:17:19 (26108): Guest Log: -rw-r--r--. 1 atlas atlas      8579 Jun  4 09:17 runtime_log.err
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas       650 Jun  4 09:17 lpaLDmNctg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvzmKDmLPhxEo.diag
2025-06-04 18:17:19 (26108): Guest Log: Looking for outputfile HITS.45006595._051199.pool.root.1
2025-06-04 18:17:19 (26108): Guest Log: HITS file was successfully produced
2025-06-04 18:17:19 (26108): Guest Log: -rw-------. 1 atlas atlas 182919364 Jun  4 09:16 /home/atlas/RunAtlas/HITS.45006595._051199.pool.root.1
2025-06-04 18:17:20 (26108): Guest Log: Successfully finished the ATLAS job!
2025-06-04 18:17:20 (26108): Guest Log: Copying the results back to the shared directory!
2025-06-04 18:17:20 (26108): Guest Log:  *** Contents of shared directory: ***
2025-06-04 18:17:20 (26108): Guest Log: total 387936
2025-06-04 18:17:20 (26108): Guest Log: -rwxrwxrwx. 1 root root 213250004 Jun  4 08:33 ATLAS.root_0
2025-06-04 18:17:20 (26108): Guest Log: -rwxrwxrwx. 1 root root 182919364 Jun  4 09:17 HITS.pool.root.1
2025-06-04 18:17:20 (26108): Guest Log: -rwxrwxrwx. 1 root root      9421 Jun  4 08:33 init_data.xml
2025-06-04 18:17:20 (26108): Guest Log: -rwxrwxrwx. 1 root root    508879 Jun  4 07:51 input.tar.gz
2025-06-04 18:17:20 (26108): Guest Log: -rwxrwxrwx. 1 root root    532480 Jun  4 09:17 result.tar.gz
2025-06-04 18:17:20 (26108): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 07:51 start_atlas.sh
2025-06-04 18:17:20 (26108): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 18:17:20 (26108): VM Completion File Detected.
2025-06-04 18:17:20 (26108): Powering off VM.
2025-06-04 18:17:20 (26108): Successfully stopped VM.
2025-06-04 18:17:20 (26108): Deregistering VM. (boinc_1bd361f0eab84d6c, slot#3)
2025-06-04 18:17:20 (26108): Removing network bandwidth throttle group from VM.
2025-06-04 18:17:21 (26108): Removing VM from VirtualBox.
18:17:26 (26108): called boinc_finish(0)

</stderr_txt>
]]>

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