Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 09:50:52 (47984): Detected: vboxwrapper 26206
2025-06-04 09:50:52 (47984): Detected: BOINC client v8.0.2
2025-06-04 09:50:53 (47984): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-06-04 09:50:53 (47984): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 09:50:54 (47984): Create VM. (boinc_fd2cf89a0d3361af, slot#0)
2025-06-04 09:50:54 (47984): Setting Memory Size for VM. (4800MB)
2025-06-04 09:50:55 (47984): Setting CPU Count for VM. (8)
2025-06-04 09:50:55 (47984): Setting Chipset Options for VM.
2025-06-04 09:50:55 (47984): Setting Graphics Controller Options for VM.
2025-06-04 09:50:55 (47984): Setting Boot Options for VM.
2025-06-04 09:50:56 (47984): Setting Network Configuration for NAT.
2025-06-04 09:50:56 (47984): Enabling VM Network Access.
2025-06-04 09:50:56 (47984): Disabling USB Support for VM.
2025-06-04 09:50:56 (47984): Disabling COM Port Support for VM.
2025-06-04 09:50:57 (47984): Disabling LPT Port Support for VM.
2025-06-04 09:50:57 (47984): Disabling Audio Support for VM.
2025-06-04 09:50:57 (47984): Disabling Clipboard Support for VM.
2025-06-04 09:50:58 (47984): Disabling Drag and Drop Support for VM.
2025-06-04 09:50:58 (47984): Adding storage controller(s) to VM.
2025-06-04 09:50:58 (47984): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 09:51:01 (47984): Adding VirtualBox Guest Additions to VM.
2025-06-04 09:51:01 (47984): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 09:51:01 (47984): forwarding host port 53201 to guest port 80
2025-06-04 09:51:02 (47984): Enabling remote desktop for VM.
2025-06-04 09:51:02 (47984): Enabling shared directory for VM.
2025-06-04 09:51:03 (47984): Starting VM using VBoxManage interface. (boinc_fd2cf89a0d3361af, slot#0)
2025-06-04 09:51:08 (47984): Successfully started VM. (PID = '43720')
2025-06-04 09:51:08 (47984): Reporting VM Process ID to BOINC.
2025-06-04 09:51:08 (47984): Guest Log: BIOS: VirtualBox 7.0.22
2025-06-04 09:51:08 (47984): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 09:51:08 (47984): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 09:51:08 (47984): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 09:51:08 (47984): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 09:51:08 (47984): Detected: Web Application Enabled (http://localhost:53201)
2025-06-04 09:51:08 (47984): Detected: Remote Desktop Enabled (localhost:53202)
2025-06-04 09:51:08 (47984): Preference change detected
2025-06-04 09:51:08 (47984): Setting CPU throttle for VM. (100%)
2025-06-04 09:51:08 (47984): Setting network throttle for VM. (5000KB)
2025-06-04 09:51:08 (47984): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 09:51:10 (47984): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 09:51:10 (47984): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 09:51:13 (47984): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 09:51:13 (47984): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 09:51:13 (47984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 09:51:23 (47984): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 09:51:23 (47984): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 09:51:39 (47984): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 09:51:39 (47984): Guest Log: 00:00:00.000130 main     Log opened 2025-06-04T09:51:36.868787000Z
2025-06-04 09:51:39 (47984): Guest Log: 00:00:00.000208 main     OS Product: Linux
2025-06-04 09:51:39 (47984): Guest Log: 00:00:00.000227 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 09:51:39 (47984): Guest Log: 00:00:00.000242 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 09:51:39 (47984): Guest Log: 00:00:00.000257 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 09:51:39 (47984): Guest Log: 00:00:00.000258 main     Process ID: 1366
2025-06-04 09:51:39 (47984): Guest Log: 00:00:00.000258 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 09:51:39 (47984): Guest Log: 00:00:00.000732 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 09:51:39 (47984): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 09:51:39 (47984): Guest Log: [INFO] Mounting shared directory
2025-06-04 09:51:39 (47984): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 09:51:49 (47984): Guest Log: 00:00:10.017482 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 191 501 428 000ns (GuestNow=1 749 023 505 369 334 000 ns GuestLast=1 749 030 696 870 762 000 ns fSetTimeLastLoop=true )
2025-06-04 09:52:22 (47984): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 09:52:22 (47984): Guest Log: [INFO] Detected branch: prod
2025-06-04 09:52:22 (47984): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 09:52:22 (47984): Guest Log: Copying input files
2025-06-04 09:52:23 (47984): Guest Log: Copied input files into RunAtlas.
2025-06-04 09:52:23 (47984): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 09:52:23 (47984): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 09:52:23 (47984): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 09:52:23 (47984): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 09:53:34 (47984): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 09:53:34 (47984): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 09:53:34 (47984): Guest Log: 2.6.3.0 1667 1 29624 146772 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
2025-06-04 09:53:36 (47984): Guest Log: copied the webapp to /var/www
2025-06-04 09:53:36 (47984): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 09:53:36 (47984): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 09:53:36 (47984): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 09:53:36 (47984): Guest Log:  *** Starting ATLAS job. (PandaID=6678285858 taskID=45006595) ***
2025-06-04 10:37:54 (47984): Guest Log:  *** Job finished ***
2025-06-04 10:37:54 (47984): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:42,010 | INFO     | [payload] control thread has finished
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:42,402 | INFO     | [data] copytool_out thread has finished
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:44,238 | INFO     | [data] queue_monitor thread has finished
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:44,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140693570574144)>', '<ExcThread(monitor, started 140692324087552)>']
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:44,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:44,514 | INFO     | [monitor] control thread has ended
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,504 | INFO     | all workflow threads have been joined
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,504 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,504 | INFO     | traces error code: 0
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,504 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,571 [wrapper] ==== pilot stdout END ====
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,575 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,577 [wrapper] pilotpid: 6045
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,580 [wrapper] Pilot exit status: 0
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,715 [wrapper] pandaids: 6678285858
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,733 [wrapper] cleanup supervisor_pilot 19426 6046
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,736 [wrapper] Test setup, not cleaning
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,740 [wrapper] apfmon messages muted
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,743 [wrapper] ==== wrapper stdout END ====
2025-06-04 10:37:54 (47984): Guest Log: 2025-06-04 08:37:49,746 [wrapper] ==== wrapper stderr END ====
2025-06-04 10:37:54 (47984): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 10:37:54 (47984): Guest Log:     "exeErrorCode": 0,
2025-06-04 10:37:54 (47984): Guest Log:     "exeErrorDiag": "",
2025-06-04 10:37:54 (47984): Guest Log:     "pilotErrorCode": 0,
2025-06-04 10:37:54 (47984): Guest Log:     "pilotErrorDiag": "",
2025-06-04 10:37:54 (47984): Guest Log:  *** Listing of results directory ***
2025-06-04 10:37:54 (47984): Guest Log: total 183692
2025-06-04 10:37:54 (47984): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 02:52 pilot3.tar.gz
2025-06-04 10:37:54 (47984): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 02:58 queuedata.json
2025-06-04 10:37:54 (47984): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 02:58 runpilot2-wrapper.sh
2025-06-04 10:37:54 (47984): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 07:52 start_atlas.sh
2025-06-04 10:37:54 (47984): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Jun  4 07:52 input.tar.gz
2025-06-04 10:37:54 (47984): Guest Log: -rwxr-xr-x. 1 atlas atlas      9232 Jun  4 07:52 init_data.xml
2025-06-04 10:37:54 (47984): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 07:52 EVNT.45006593._002041.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 10:37:54 (47984): Guest Log: -rw-r--r--. 1 atlas atlas      2524 Jun  4 07:53 pandaJob.out
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas    986745 Jun  4 07:56 agis_schedconf.cvmfs.json
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  4 07:56 agis_ddmendpoints.agis.ALL.json
2025-06-04 10:37:54 (47984): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 07:56 pilot3
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas 183247914 Jun  4 08:37 HITS.45006595._050952.pool.root.1
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas      1026 Jun  4 08:37 memory_monitor_summary.json
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas    292463 Jun  4 08:37 log.45006595._050952.job.log.tgz.1
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas      7710 Jun  4 08:37 heartbeat.json
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 08:37 pilot_heartbeat.json
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  4 08:37 pilotlog.txt
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas    247472 Jun  4 08:37 log.45006595._050952.job.log.1
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 08:37 output.list
2025-06-04 10:37:54 (47984): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 08:37 runtime_log
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas    563200 Jun  4 08:37 result.tar.gz
2025-06-04 10:37:54 (47984): Guest Log: -rw-r--r--. 1 atlas atlas      8646 Jun  4 08:37 runtime_log.err
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas       669 Jun  4 08:37 RLNODmLWtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoxmKDmoHUB1n.diag
2025-06-04 10:37:54 (47984): Guest Log: Looking for outputfile HITS.45006595._050952.pool.root.1
2025-06-04 10:37:54 (47984): Guest Log: HITS file was successfully produced
2025-06-04 10:37:54 (47984): Guest Log: -rw-------. 1 atlas atlas 183247914 Jun  4 08:37 /home/atlas/RunAtlas/HITS.45006595._050952.pool.root.1
2025-06-04 10:37:55 (47984): Guest Log: Successfully finished the ATLAS job!
2025-06-04 10:37:55 (47984): Guest Log: Copying the results back to the shared directory!
2025-06-04 10:37:55 (47984): Guest Log:  *** Contents of shared directory: ***
2025-06-04 10:37:55 (47984): Guest Log: total 390608
2025-06-04 10:37:55 (47984): Guest Log: -rwxrwxrwx. 1 root root 215624260 Jun  4 07:50 ATLAS.root_0
2025-06-04 10:37:55 (47984): Guest Log: -rwxrwxrwx. 1 root root 183247914 Jun  4  2025 HITS.pool.root.1
2025-06-04 10:37:55 (47984): Guest Log: -rwxrwxrwx. 1 root root      9232 Jun  4 07:50 init_data.xml
2025-06-04 10:37:55 (47984): Guest Log: -rwxrwxrwx. 1 root root    508880 Jun  4 07:50 input.tar.gz
2025-06-04 10:37:55 (47984): Guest Log: -rwxrwxrwx. 1 root root    563200 Jun  4  2025 result.tar.gz
2025-06-04 10:37:55 (47984): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 07:50 start_atlas.sh
2025-06-04 10:37:55 (47984): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 10:37:55 (47984): VM Completion File Detected.
2025-06-04 10:37:55 (47984): Powering off VM.
2025-06-04 10:37:56 (47984): Successfully stopped VM.
2025-06-04 10:37:56 (47984): Deregistering VM. (boinc_fd2cf89a0d3361af, slot#0)
2025-06-04 10:37:56 (47984): Removing network bandwidth throttle group from VM.
2025-06-04 10:37:56 (47984): Removing VM from VirtualBox.
10:38:01 (47984): called boinc_finish(0)

</stderr_txt>
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