Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:39:18 (2465303): wrapper (7.7.26015): starting
04:39:18 (2465303): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 04:39:18] Arguments: --nthreads 12
[2025-06-04 04:39:18] Threads: 12
[2025-06-04 04:39:18] Checking for CVMFS
[2025-06-04 04:39:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:39:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:39:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:39:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:39:19] 2.12.6.0 5825 1110 156336 146773 0 66 35375704 40960000 5209 16776704 0 10023726 99.910 1817270 50530 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 04:39:19] CVMFS is ok
[2025-06-04 04:39:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:39:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:39:19] Further information can be found at the LHC@home message board.
[2025-06-04 04:39:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:39:19] Checking for apptainer binary...
[2025-06-04 04:39:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:39:19] Running /usr/bin/apptainer --version
[2025-06-04 04:39:19] apptainer version 1.4.1-1.el9
[2025-06-04 04:39:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:39:19] c6-8-12-4.aglt2.org
[2025-06-04 04:39:19] apptainer works
[2025-06-04 04:39:19] Set ATHENA_PROC_NUMBER=12
[2025-06-04 04:39:19] Set ATHENA_CORE_NUMBER=12
[2025-06-04 04:39:19] Starting ATLAS job with PandaID=6678218430
[2025-06-04 04:39:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:19:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:19:54]  filesize=341543
[2025-06-04 05:19:54]  filetype=log
[2025-06-04 05:19:54]  guid=0866afeb-2575-4f66-8d67-1e3c2156e8a6
[2025-06-04 05:19:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 05:19:54]  is_altstaged=None
[2025-06-04 05:19:54]  is_tar=False
[2025-06-04 05:19:54]  lfn=log.45006595._049242.job.log.tgz.1
[2025-06-04 05:19:54]  mtime=0
[2025-06-04 05:19:54]  protocol_id=None
[2025-06-04 05:19:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:19:54]  replicas=None
[2025-06-04 05:19:54]  scope=mc23_13p6TeV
[2025-06-04 05:19:54]  status=None
[2025-06-04 05:19:54]  status_code=0
[2025-06-04 05:19:54]  storage_token=
[2025-06-04 05:19:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678218430/log.45006595._049242.job.log.tgz.1
[2025-06-04 05:19:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/58/log.45006595._049242.job.log.tgz.1
[2025-06-04 05:19:54]  workdir=None
[2025-06-04 05:19:54] ]
[2025-06-04 05:19:54] 2025-06-04 09:19:38,039 | INFO     | transferring file log.45006595._049242.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678218430/log.45006595._049242.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:19:54] 2025-06-04 09:19:38,039 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678218430/log.45006595._049242.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._049242.job
[2025-06-04 05:19:54] 2025-06-04 09:19:38,052 | INFO     | adding to output.list: log.45006595._049242.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/58/log.45006595._049242.job.log.tg
[2025-06-04 05:19:54] 2025-06-04 09:19:38,052 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:19:54] 2025-06-04 09:19:38,052 | INFO     | summary of transferred files:
[2025-06-04 05:19:54] 2025-06-04 09:19:38,053 | INFO     |  -- lfn=log.45006595._049242.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:19:54] 2025-06-04 09:19:38,053 | INFO     | stage-out finished correctly
[2025-06-04 05:19:54] 2025-06-04 09:19:38,099 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:19:54] 2025-06-04 09:19:38,330 | INFO     | monitor loop #184: job 0:6678218430 is in state 'finished'
[2025-06-04 05:19:54] 2025-06-04 09:19:38,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:19:54] 2025-06-04 09:19:39,774 | INFO     | job 6678218430 has state=finished
[2025-06-04 05:19:54] 2025-06-04 09:19:39,774 | INFO     | preparing for final server update for job 6678218430 in state='finished'
[2025-06-04 05:19:54] 2025-06-04 09:19:39,774 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:19:54] 2025-06-04 09:19:39,774 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:19:54] 2025-06-04 09:19:39,774 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:19:54] 2025-06-04 09:19:39,774 | INFO     | job 6678218430 has finished - writing final server update
[2025-06-04 05:19:54] 2025-06-04 09:19:39,775 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:19:54] 2025-06-04 09:19:39,789 | INFO     | executing command: lscpu
[2025-06-04 05:19:54] 2025-06-04 09:19:39,837 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:19:54] 2025-06-04 09:19:40,831 | INFO     | monitor loop #185: job 0:6678218430 is in state 'finished'
[2025-06-04 05:19:54] 2025-06-04 09:19:40,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:19:54] 2025-06-04 09:19:42,371 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 05:19:54] 2025-06-04 09:19:42,372 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678218430/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:19:54] 2025-06-04 09:19:42,372 | INFO     | extracted standard info from prmon json
[2025-06-04 05:19:54] 2025-06-04 09:19:42,372 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:19:54] 2025-06-04 09:19:42,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:19:54] 2025-06-04 09:19:42,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:19:54] 2025-06-04 09:19:42,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | sum of square deviations: 11133232.0
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | sum of deviations: 3485539816.9999995
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | mean x: 1749027668.0
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | mean y: 2632552.909090909
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | -- intersect: -547574708676.36334
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | intersect: -547574708676.36334
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | chi2: 0.692094731638444
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | -- intersect: -547574708676.36334
[2025-06-04 05:19:54] 2025-06-04 09:19:42,374 | INFO     | current memory leak: 313.08 B/s (using 33 data points, chi2=0.69)
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | ..............................
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | . Timing measurements:
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | . get job = 0 s
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | . initial setup = 2 s
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | . payload setup = 4 s
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | . stage-in = 0 s
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | . payload execution = 2389 s
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | . stage-out = 0 s
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | . log creation = 0 s
[2025-06-04 05:19:54] 2025-06-04 09:19:42,375 | INFO     | ..............................
[2025-06-04 05:19:54] 2025-06-04 09:19:42,553 | INFO     | 
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | job summary report
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | --------------------------------------------------
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | PanDA job id: 6678218430
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | task id: 45006595
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | errors: (none)
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | pilot state: finished 
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | transexitcode: 0
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | exeerrorcode: 0
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | exeerrordiag: 
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | exitcode: 0
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | exitmsg: OK
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | cpuconsumptiontime: 21381 s
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | nevents: 400
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | neventsw: 0
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | pid: 2475940
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | pgrp: 2475940
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | corecount: 12
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | event service: False
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | sizes: {0: 2404356, 1: 2405212, 3: 2405418, 11: 2405446, 2397: 2430510, 2398: 2439635, 2402: 2439749}
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | --------------------------------------------------
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | 
[2025-06-04 05:19:54] 2025-06-04 09:19:42,554 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:19:54] 2025-06-04 09:19:42,567 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,567 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | job 6678218430 has completed (purged errors)
[2025-06-04 05:19:54] 2025-06-04 09:19:42,568 | INFO     | overall cleanup function is called
[2025-06-04 05:19:54] 2025-06-04 09:19:43,575 | INFO     | --- collectZombieJob: --- 10, [2475940]
[2025-06-04 05:19:54] 2025-06-04 09:19:43,576 | INFO     | zombie collector waiting for pid 2475940
[2025-06-04 05:19:54] 2025-06-04 09:19:43,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:19:54] 2025-06-04 09:19:43,576 | INFO     | collected zombie processes
[2025-06-04 05:19:54] 2025-06-04 09:19:43,576 | INFO     | will attempt to kill all subprocesses of pid=2475940
[2025-06-04 05:19:54] 2025-06-04 09:19:43,705 | INFO     | process IDs to be killed: [2475940] (in reverse order)
[2025-06-04 05:19:54] 2025-06-04 09:19:43,755 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:19:54] 2025-06-04 09:19:43,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:19:54] 2025-06-04 09:19:43,761 | INFO     | did not find any defunct processes belonging to 2475940
[2025-06-04 05:19:54] 2025-06-04 09:19:43,766 | INFO     | did not find any defunct processes belonging to 2475940
[2025-06-04 05:19:54] 2025-06-04 09:19:43,766 | INFO     | ready for new job
[2025-06-04 05:19:54] 2025-06-04 09:19:43,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:19:54] 2025-06-04 09:19:43,767 | INFO     | **************************************
[2025-06-04 05:19:54] 2025-06-04 09:19:43,768 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:19:54] 2025-06-04 09:19:43,768 | INFO     | **************************************
[2025-06-04 05:19:54] 2025-06-04 09:19:43,768 | INFO     | 
[2025-06-04 05:19:54] 2025-06-04 09:19:43,782 | INFO     | architecture information:
[2025-06-04 05:19:54] 2025-06-04 09:19:43,782 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:19:54] 2025-06-04 09:19:43,792 | INFO     | cat /etc/os-release:
[2025-06-04 05:19:54] NAME="CentOS Linux"
[2025-06-04 05:19:54] VERSION="7 (Core)"
[2025-06-04 05:19:54] ID="centos"
[2025-06-04 05:19:54] ID_LIKE="rhel fedora"
[2025-06-04 05:19:54] VERSION_ID="7"
[2025-06-04 05:19:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:19:54] ANSI_COLOR="0;31"
[2025-06-04 05:19:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:19:54] HOME_URL="https://www.centos.org/"
[2025-06-04 05:19:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:19:54] 
[2025-06-04 05:19:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:19:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:19:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:19:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:19:54] 
[2025-06-04 05:19:54] 2025-06-04 09:19:43,792 | INFO     | **************************************
[2025-06-04 05:19:54] 2025-06-04 09:19:44,295 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:19:54] 2025-06-04 09:19:44,307 | INFO     | sufficient remaining disk space (56312725504 B)
[2025-06-04 05:19:54] 2025-06-04 09:19:44,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:19:54] 2025-06-04 09:19:44,307 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:19:54] 2025-06-04 09:19:44,308 | INFO     | update_server=False
[2025-06-04 05:19:54] 2025-06-04 09:19:44,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:19:54] 2025-06-04 09:19:44,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:19:54] 2025-06-04 09:19:44,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:19:54] 2025-06-04 09:19:44,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:19:54] 2025-06-04 09:19:44,308 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:19:54] 2025-06-04 09:19:44,309 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:19:54] 2025-06-04 09:19:44,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:19:54] 2025-06-04 09:19:44,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:19:54] 2025-06-04 09:19:44,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:19:54] 2025-06-04 09:19:44,340 | INFO     | aborting loop
[2025-06-04 05:19:54] 2025-06-04 09:19:44,440 | INFO     | all data control threads have been joined
[2025-06-04 05:19:54] 2025-06-04 09:19:44,631 | INFO     | all job control threads have been joined
[2025-06-04 05:19:54] 2025-06-04 09:19:45,313 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:45,314 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:45,332 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:45,345 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:45,445 | INFO     | [data] control thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:45,595 | INFO     | all payload control threads have been joined
[2025-06-04 05:19:54] 2025-06-04 09:19:45,636 | INFO     | [job] control thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:45,873 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:45,906 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:46,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:46,314 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:46,496 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:46,497 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:46,569 | INFO     | [job] validate thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:46,600 | INFO     | [payload] control thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:46,729 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:48,314 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:19:54] 2025-06-04 09:19:48,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163553158976)>', '<ExcThread(monitor, started 140162617038592)>']
[2025-06-04 05:19:54] 2025-06-04 09:19:49,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:19:54] 2025-06-04 09:19:49,333 | INFO     | [monitor] control thread has ended
[2025-06-04 05:19:54] 2025-06-04 09:19:53,827 | INFO     | all workflow threads have been joined
[2025-06-04 05:19:54] 2025-06-04 09:19:53,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:19:54] 2025-06-04 09:19:53,827 | INFO     | traces error code: 0
[2025-06-04 05:19:54] 2025-06-04 09:19:53,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:19:54] 2025-06-04 09:19:53,926 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:19:54] 2025-06-04 09:19:53,928 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:19:54] 2025-06-04 09:19:53,930 [wrapper] pilotpid: 2468943
[2025-06-04 05:19:54] 2025-06-04 09:19:53,931 [wrapper] Pilot exit status: 0
[2025-06-04 05:19:54] 2025-06-04 09:19:53,938 [wrapper] pandaids: 6678218430
[2025-06-04 05:19:54] 2025-06-04 09:19:53,972 [wrapper] cleanup supervisor_pilot 2556197 2468944
[2025-06-04 05:19:54] 2025-06-04 09:19:53,974 [wrapper] Test setup, not cleaning
[2025-06-04 05:19:54] 2025-06-04 09:19:53,975 [wrapper] apfmon messages muted
[2025-06-04 05:19:54] 2025-06-04 09:19:53,977 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:19:54] 2025-06-04 09:19:53,978 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:19:54]  *** Error codes and diagnostics ***
[2025-06-04 05:19:54]     "exeErrorCode": 0,
[2025-06-04 05:19:54]     "exeErrorDiag": "",
[2025-06-04 05:19:54]     "pilotErrorCode": 0,
[2025-06-04 05:19:54]     "pilotErrorDiag": "",
[2025-06-04 05:19:54]  *** Listing of results directory ***
[2025-06-04 05:19:54] total 386504
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:58 pilot3.tar.gz
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 20:43 queuedata.json
[2025-06-04 05:19:54] -rwx------. 1 boincer umatlas     37140 Jun  3 20:44 runpilot2-wrapper.sh
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas       100 Jun  4 04:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:19:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 04:39 run_atlas
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas       105 Jun  4 04:39 job.xml
[2025-06-04 05:19:54] -rw-r--r--. 2 boincer umatlas 215774278 Jun  4 04:39 EVNT.45006593._001975.pool.root.1
[2025-06-04 05:19:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:39 start_atlas.sh
[2025-06-04 05:19:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 04:39 shared
[2025-06-04 05:19:54] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 04:39 input.tar.gz
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas         0 Jun  4 04:39 boinc_lockfile
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 04:39 pandaJob.out
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas    986774 Jun  4 04:39 agis_schedconf.cvmfs.json
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas   1603667 Jun  4 04:39 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:19:54] drwx------. 4 boincer umatlas      4096 Jun  4 04:39 pilot3
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 05:18 init_data.xml
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas        95 Jun  4 05:18 pilot_heartbeat.json
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas 174961037 Jun  4 05:19 HITS.45006595._049242.pool.root.1
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas       529 Jun  4 05:19 boinc_task_state.xml
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas      1028 Jun  4 05:19 memory_monitor_summary.json
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas    341543 Jun  4 05:19 log.45006595._049242.job.log.tgz.1
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas      7708 Jun  4 05:19 heartbeat.json
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas        27 Jun  4 05:19 wrapper_checkpoint.txt
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 05:19 boinc_mmap_file
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas      4476 Jun  4 05:19 pilotlog.txt
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas    264704 Jun  4 05:19 log.45006595._049242.job.log.1
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas       357 Jun  4 05:19 output.list
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas       620 Jun  4 05:19 runtime_log
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas    624640 Jun  4 05:19 result.tar.gz
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 05:19 runtime_log.err
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas       650 Jun  4 05:19 ls3LDmPQrg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmefmKDmj5e6An.diag
[2025-06-04 05:19:54] -rw-r--r--. 1 boincer umatlas     21154 Jun  4 05:19 stderr.txt
[2025-06-04 05:19:54] HITS file was successfully produced:
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas 174961037 Jun  4 05:19 shared/HITS.pool.root.1
[2025-06-04 05:19:54]  *** Contents of shared directory: ***
[2025-06-04 05:19:54] total 382712
[2025-06-04 05:19:54] -rw-r--r--. 2 boincer umatlas 215774278 Jun  4 04:39 ATLAS.root_0
[2025-06-04 05:19:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:39 start_atlas.sh
[2025-06-04 05:19:54] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 04:39 input.tar.gz
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas 174961037 Jun  4 05:19 HITS.pool.root.1
[2025-06-04 05:19:54] -rw-------. 1 boincer umatlas    624640 Jun  4 05:19 result.tar.gz
05:19:55 (2465303): run_atlas exited; CPU time 21415.446537
05:19:55 (2465303): called boinc_finish(0)

</stderr_txt>
]]>

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