Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:19:26 (2357159): wrapper (7.7.26015): starting
11:19:26 (2357159): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 11:19:26] Arguments: --nthreads 12
[2025-06-06 11:19:26] Threads: 12
[2025-06-06 11:19:26] Checking for CVMFS
[2025-06-06 11:19:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:19:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:19:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:20:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:20:05] 2.13.0.0 2357367 0 25316 146847 3 1 2169842 4096000 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-06-06 11:20:05] CVMFS is ok
[2025-06-06 11:20:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:20:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 11:20:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 11:20:05] Further information can be found at the LHC@home message board.
[2025-06-06 11:20:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:20:05] Checking for apptainer binary...
[2025-06-06 11:20:05] apptainer is not installed, using version from CVMFS
[2025-06-06 11:20:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:20:06] ws24
[2025-06-06 11:20:06] apptainer works
[2025-06-06 11:20:06] Set ATHENA_PROC_NUMBER=12
[2025-06-06 11:20:06] Set ATHENA_CORE_NUMBER=12
[2025-06-06 11:20:06] Starting ATLAS job with PandaID=6678285582
[2025-06-06 11:20:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 12:48:30]  *** The last 200 lines of the pilot log: ***
[2025-06-06 12:48:30] 2025-06-06 10:35:30,829 | INFO     | preparing for final server update for job 6678285582 in state='finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:30,830 | INFO     | this job has now completed (state=finished)
[2025-06-06 12:48:30] 2025-06-06 10:35:30,830 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 12:48:30] 2025-06-06 10:35:30,830 | INFO     | log transfer has been attempted: DONE
[2025-06-06 12:48:30] 2025-06-06 10:35:30,830 | INFO     | job 6678285582 has finished - writing final server update
[2025-06-06 12:48:30] 2025-06-06 10:35:30,830 | INFO     | total number of processed events: 400 (read)
[2025-06-06 12:48:30] 2025-06-06 10:35:30,835 | INFO     | executing command: lscpu
[2025-06-06 12:48:30] 2025-06-06 10:35:30,896 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 12:48:30] 2025-06-06 10:35:31,772 | WARNING  | process 2368049 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 12:48:30] 2025-06-06 10:35:31,773 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678285582/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:48:30] 2025-06-06 10:35:32,015 | INFO     | number of running child processes to parent process 2368049: 1
[2025-06-06 12:48:30] 2025-06-06 10:35:32,015 | INFO     | maximum number of monitored processes: 6
[2025-06-06 12:48:30] 2025-06-06 10:35:34,518 | INFO     | monitor loop #323: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:34,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:37,023 | INFO     | monitor loop #324: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:37,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:39,526 | INFO     | monitor loop #325: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:39,526 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:42,029 | INFO     | monitor loop #326: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:42,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:44,532 | INFO     | monitor loop #327: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:44,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:47,038 | INFO     | monitor loop #328: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:47,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:49,544 | INFO     | monitor loop #329: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:49,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:52,050 | INFO     | monitor loop #330: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:52,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:52,776 | INFO     | PID=2361425 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 12:48:30] 2025-06-06 10:35:54,553 | INFO     | monitor loop #331: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:54,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:57,056 | INFO     | monitor loop #332: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:57,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:35:59,559 | INFO     | monitor loop #333: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:35:59,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:36:02,062 | INFO     | monitor loop #334: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:36:02,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:36:04,566 | INFO     | monitor loop #335: job 0:6678285582 is in state 'finished'
[2025-06-06 12:48:30] 2025-06-06 10:36:04,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 12:48:30] 2025-06-06 10:36:06,095 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 12:48:30] 2025-06-06 10:36:06,095 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678285582/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:48:30] 2025-06-06 10:36:06,096 | INFO     | extracted standard info from prmon json
[2025-06-06 12:48:30] 2025-06-06 10:36:06,096 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 12:48:30] 2025-06-06 10:36:06,096 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 12:48:30] 2025-06-06 10:36:06,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 12:48:30] 2025-06-06 10:36:06,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 12:48:30] 2025-06-06 10:36:06,098 | INFO     | fitting pss+swap vs Time
[2025-06-06 12:48:30] 2025-06-06 10:36:06,099 | INFO     | sum of square deviations: 89127252.5
[2025-06-06 12:48:30] 2025-06-06 10:36:06,099 | INFO     | sum of deviations: -6107579707.499999
[2025-06-06 12:48:30] 2025-06-06 10:36:06,099 | INFO     | mean x: 1749204009.5
[2025-06-06 12:48:30] 2025-06-06 10:36:06,099 | INFO     | mean y: 3014469.106060606
[2025-06-06 12:48:30] 2025-06-06 10:36:06,099 | INFO     | -- intersect: 119869863418.588
[2025-06-06 12:48:30] 2025-06-06 10:36:06,099 | INFO     | intersect: 119869863418.588
[2025-06-06 12:48:30] 2025-06-06 10:36:06,100 | INFO     | chi2: 0.19838404551427066
[2025-06-06 12:48:30] 2025-06-06 10:36:06,100 | INFO     | -- intersect: 119869863418.588
[2025-06-06 12:48:30] 2025-06-06 10:36:06,100 | INFO     | current memory leak: -68.53 B/s (using 66 data points, chi2=0.20)
[2025-06-06 12:48:30] 2025-06-06 10:36:06,100 | INFO     | ..............................
[2025-06-06 12:48:30] 2025-06-06 10:36:06,101 | INFO     | . Timing measurements:
[2025-06-06 12:48:30] 2025-06-06 10:36:06,101 | INFO     | . get job = 0 s
[2025-06-06 12:48:30] 2025-06-06 10:36:06,101 | INFO     | . initial setup = 10 s
[2025-06-06 12:48:30] 2025-06-06 10:36:06,101 | INFO     | . payload setup = 7 s
[2025-06-06 12:48:30] 2025-06-06 10:36:06,101 | INFO     | . stage-in = 0 s
[2025-06-06 12:48:30] 2025-06-06 10:36:06,101 | INFO     | . payload execution = 4404 s
[2025-06-06 12:48:30] 2025-06-06 10:36:06,101 | INFO     | . stage-out = 0 s
[2025-06-06 12:48:30] 2025-06-06 10:36:06,102 | INFO     | . log creation = 0 s
[2025-06-06 12:48:30] 2025-06-06 10:36:06,102 | INFO     | ..............................
[2025-06-06 12:48:30] 2025-06-06 10:36:06,209 | INFO     | 
[2025-06-06 12:48:30] 2025-06-06 10:36:06,209 | INFO     | job summary report
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | --------------------------------------------------
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | PanDA job id: 6678285582
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | task id: 45006595
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | errors: (none)
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | pilot state: finished 
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | transexitcode: 0
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | exeerrorcode: 0
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | exeerrordiag: 
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | exitcode: 0
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | exitmsg: OK
[2025-06-06 12:48:30] 2025-06-06 10:36:06,210 | INFO     | cpuconsumptiontime: 36501 s
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | nevents: 400
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | neventsw: 0
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | pid: 2368049
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | pgrp: 2368049
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | corecount: 12
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | event service: False
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | sizes: {0: 2397178, 1: 2397377, 5: 2397583, 11: 2397639, 4415: 2423522, 4416: 2423521, 4418: 2432660, 4419: 2432716, 4457: 2432886}
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | --------------------------------------------------
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | 
[2025-06-06 12:48:30] 2025-06-06 10:36:06,211 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 12:48:30] 2025-06-06 10:36:06,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,285 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 12:48:30] 2025-06-06 10:36:06,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,285 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 12:48:30] 2025-06-06 10:36:06,285 | INFO     | job 6678285582 has completed (purged errors)
[2025-06-06 12:48:30] 2025-06-06 10:36:06,285 | INFO     | overall cleanup function is called
[2025-06-06 12:48:30] 2025-06-06 10:36:07,298 | INFO     | --- collectZombieJob: --- 10, [2368049]
[2025-06-06 12:48:30] 2025-06-06 10:36:07,298 | INFO     | zombie collector waiting for pid 2368049
[2025-06-06 12:48:30] 2025-06-06 10:36:07,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 12:48:30] 2025-06-06 10:36:07,299 | INFO     | collected zombie processes
[2025-06-06 12:48:30] 2025-06-06 10:36:07,299 | INFO     | will attempt to kill all subprocesses of pid=2368049
[2025-06-06 12:48:30] 2025-06-06 10:36:07,544 | INFO     | process IDs to be killed: [2368049] (in reverse order)
[2025-06-06 12:48:30] 2025-06-06 10:36:07,705 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 12:48:30] 2025-06-06 10:36:07,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 12:48:30] 2025-06-06 10:36:07,718 | INFO     | did not find any defunct processes belonging to 2368049
[2025-06-06 12:48:30] 2025-06-06 10:36:07,726 | INFO     | did not find any defunct processes belonging to 2368049
[2025-06-06 12:48:30] 2025-06-06 10:36:07,727 | INFO     | ready for new job
[2025-06-06 12:48:30] 2025-06-06 10:36:07,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 12:48:30] 2025-06-06 10:36:07,728 | INFO     | **************************************
[2025-06-06 12:48:30] 2025-06-06 10:36:07,729 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 12:48:30] 2025-06-06 10:36:07,729 | INFO     | **************************************
[2025-06-06 12:48:30] 2025-06-06 10:36:07,729 | INFO     | 
[2025-06-06 12:48:30] 2025-06-06 10:36:07,730 | INFO     | architecture information:
[2025-06-06 12:48:30] 2025-06-06 10:36:07,734 | INFO     | executing command: cat /etc/os-release
[2025-06-06 12:48:30] 2025-06-06 10:36:07,771 | INFO     | cat /etc/os-release:
[2025-06-06 12:48:30] NAME="CentOS Linux"
[2025-06-06 12:48:30] VERSION="7 (Core)"
[2025-06-06 12:48:30] ID="centos"
[2025-06-06 12:48:30] ID_LIKE="rhel fedora"
[2025-06-06 12:48:30] VERSION_ID="7"
[2025-06-06 12:48:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 12:48:30] ANSI_COLOR="0;31"
[2025-06-06 12:48:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 12:48:30] HOME_URL="https://www.centos.org/"
[2025-06-06 12:48:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 12:48:30] 
[2025-06-06 12:48:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 12:48:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 12:48:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 12:48:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 12:48:30] 
[2025-06-06 12:48:30] 2025-06-06 10:36:07,772 | INFO     | **************************************
[2025-06-06 12:48:30] 2025-06-06 10:36:08,274 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 12:48:30] 2025-06-06 10:36:08,306 | INFO     | sufficient remaining disk space (22275948544 B)
[2025-06-06 12:48:30] 2025-06-06 10:36:08,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 12:48:30] 2025-06-06 10:36:08,307 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 12:48:30] 2025-06-06 10:36:08,307 | INFO     | update_server=False
[2025-06-06 12:48:30] 2025-06-06 10:36:08,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 12:48:30] 2025-06-06 10:36:08,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:48:30] 2025-06-06 10:36:08,308 | INFO     | aborting loop
[2025-06-06 12:48:30] 2025-06-06 10:36:08,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 12:48:30] 2025-06-06 10:36:08,754 | INFO     | all data control threads have been joined
[2025-06-06 12:48:30] 2025-06-06 10:36:08,821 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 12:48:30] 2025-06-06 10:36:08,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 12:48:30] 2025-06-06 10:36:08,822 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 12:48:30] 2025-06-06 10:36:08,996 | INFO     | all job control threads have been joined
[2025-06-06 12:48:30] 2025-06-06 10:36:09,312 | INFO     | [job] job monitor thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:09,314 | INFO     | [job] retrieve thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:09,362 | INFO     | [data] copytool_in thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:09,458 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:09,710 | INFO     | [payload] validate_post thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:09,750 | INFO     | all payload control threads have been joined
[2025-06-06 12:48:30] 2025-06-06 10:36:09,759 | INFO     | [data] control thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:10,001 | INFO     | [job] control thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:10,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 12:48:30] 2025-06-06 10:36:10,222 | INFO     | [job] validate thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:10,410 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:10,441 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:10,457 | INFO     | [data] copytool_out thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:10,755 | INFO     | [payload] control thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:10,819 | INFO     | [payload] failed_post thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:11,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:48:30] 2025-06-06 10:36:12,233 | INFO     | [job] queue monitor thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:14,033 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:18,500 | INFO     | job.realtimelogging is not enabled
[2025-06-06 12:48:30] 2025-06-06 10:36:19,507 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 12:48:30] 2025-06-06 10:36:21,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127888321144640)>', '<ExcThread(monitor, started 127887902480128)>']
[2025-06-06 12:48:30] 2025-06-06 10:36:21,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 12:48:30] 2025-06-06 10:36:21,889 | INFO     | [monitor] control thread has ended
[2025-06-06 12:48:30] 2025-06-06 10:36:22,822 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-06-06 12:48:30] 2025-06-06 10:36:26,445 | INFO     | all workflow threads have been joined
[2025-06-06 12:48:30] 2025-06-06 10:36:26,445 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 12:48:30] 2025-06-06 10:36:26,446 | INFO     | traces error code: 0
[2025-06-06 12:48:30] 2025-06-06 10:36:26,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 12:48:30] 2025-06-06 10:36:26,593 [wrapper] ==== pilot stdout END ====
[2025-06-06 12:48:30] 2025-06-06 10:36:26,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 12:48:30] 2025-06-06 10:36:26,607 [wrapper] pilotpid: 2361425
[2025-06-06 12:48:30] 2025-06-06 10:36:26,617 [wrapper] Pilot exit status: 0
[2025-06-06 12:48:30] 2025-06-06 10:36:26,660 [wrapper] pandaids: 6678285582
[2025-06-06 12:48:30] 2025-06-06 10:36:26,751 [wrapper] cleanup supervisor_pilot 2382729 2361426
[2025-06-06 12:48:30] 2025-06-06 10:36:26,757 [wrapper] Test setup, not cleaning
[2025-06-06 12:48:30] 2025-06-06 10:36:26,762 [wrapper] apfmon messages muted
[2025-06-06 12:48:30] 2025-06-06 10:36:26,769 [wrapper] ==== wrapper stdout END ====
[2025-06-06 12:48:30] 2025-06-06 10:36:26,775 [wrapper] ==== wrapper stderr END ====
[2025-06-06 12:48:30]  *** Error codes and diagnostics ***
[2025-06-06 12:48:30]     "exeErrorCode": 0,
[2025-06-06 12:48:30]     "exeErrorDiag": "",
[2025-06-06 12:48:30]     "pilotErrorCode": 0,
[2025-06-06 12:48:30]     "pilotErrorDiag": "",
[2025-06-06 12:48:30]  *** Listing of results directory ***
[2025-06-06 12:48:30] total 393712
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc      5111 Jun  4 04:52 queuedata.json
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-06 12:48:30] -rwx------ 1 boinc boinc     37140 Jun  4 04:52 runpilot2-wrapper.sh
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc       100 Jun  6 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 12:48:30] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:19 run_atlas
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc       105 Jun  6 11:19 job.xml
[2025-06-06 12:48:30] -rw-r--r-- 2 boinc boinc 219052156 Jun  6 11:19 EVNT.45006593._002035.pool.root.1
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc      9498 Jun  6 11:19 init_data.xml
[2025-06-06 12:48:30] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:19 shared
[2025-06-06 12:48:30] -rw-r--r-- 2 boinc boinc    508878 Jun  6 11:19 input.tar.gz
[2025-06-06 12:48:30] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:19 start_atlas.sh
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc         0 Jun  6 11:19 boinc_lockfile
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc      2525 Jun  6 11:20 pandaJob.out
[2025-06-06 12:48:30] -rw------- 1 boinc boinc    987967 Jun  6 11:21 agis_schedconf.cvmfs.json
[2025-06-06 12:48:30] -rw------- 1 boinc boinc   1598969 Jun  6 11:21 agis_ddmendpoints.agis.ALL.json
[2025-06-06 12:48:30] drwx------ 4 boinc boinc      4096 Jun  6 11:21 pilot3
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc       529 Jun  6 12:34 boinc_task_state.xml
[2025-06-06 12:48:30] -rw------- 1 boinc boinc 178684181 Jun  6 12:34 HITS.45006595._050791.pool.root.1
[2025-06-06 12:48:30] -rw------- 1 boinc boinc      1026 Jun  6 12:35 memory_monitor_summary.json
[2025-06-06 12:48:30] -rw------- 1 boinc boinc    363285 Jun  6 12:35 log.45006595._050791.job.log.tgz.1
[2025-06-06 12:48:30] -rw------- 1 boinc boinc      7660 Jun  6 12:36 heartbeat.json
[2025-06-06 12:48:30] -rw------- 1 boinc boinc        95 Jun  6 12:36 pilot_heartbeat.json
[2025-06-06 12:48:30] -rw------- 1 boinc boinc      4432 Jun  6 12:36 pilotlog.txt
[2025-06-06 12:48:30] -rw------- 1 boinc boinc    426206 Jun  6 12:36 log.45006595._050791.job.log.1
[2025-06-06 12:48:30] -rw------- 1 boinc boinc       357 Jun  6 12:36 output.list
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc       620 Jun  6 12:36 runtime_log
[2025-06-06 12:48:30] -rw------- 1 boinc boinc    808960 Jun  6 12:36 result.tar.gz
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc      8686 Jun  6 12:36 runtime_log.err
[2025-06-06 12:48:30] -rw------- 1 boinc boinc       637 Jun  6 12:36 AvZKDmVQtg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGYaKDmFJNpOo.diag
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc        27 Jun  6 12:48 wrapper_checkpoint.txt
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc      8192 Jun  6 12:48 boinc_mmap_file
[2025-06-06 12:48:30] -rw-r--r-- 1 boinc boinc     22169 Jun  6 12:48 stderr.txt
[2025-06-06 12:48:30] HITS file was successfully produced:
[2025-06-06 12:48:30] -rw------- 1 boinc boinc 178684181 Jun  6 12:34 shared/HITS.pool.root.1
[2025-06-06 12:48:30]  *** Contents of shared directory: ***
[2025-06-06 12:48:30] total 389736
[2025-06-06 12:48:30] -rw-r--r-- 2 boinc boinc 219052156 Jun  6 11:19 ATLAS.root_0
[2025-06-06 12:48:30] -rw-r--r-- 2 boinc boinc    508878 Jun  6 11:19 input.tar.gz
[2025-06-06 12:48:30] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:19 start_atlas.sh
[2025-06-06 12:48:30] -rw------- 1 boinc boinc 178684181 Jun  6 12:34 HITS.pool.root.1
[2025-06-06 12:48:30] -rw------- 1 boinc boinc    808960 Jun  6 12:36 result.tar.gz
12:48:32 (2357159): run_atlas exited; CPU time 36342.700498
12:48:32 (2357159): called boinc_finish(0)

</stderr_txt>
]]>

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