Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:44:07 (2196786): wrapper (7.7.26015): starting
04:44:07 (2196786): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 04:44:07] Arguments: --nthreads 12
[2025-06-04 04:44:07] Threads: 12
[2025-06-04 04:44:07] Checking for CVMFS
[2025-06-04 04:44:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:44:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:44:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:44:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:44:07] 2.12.6.0 6469 596 140776 146773 3 66 25918500 32935937 7868 16776704 0 4645045 99.689 2560585 41424 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 04:44:07] CVMFS is ok
[2025-06-04 04:44:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:44:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:44:07] Further information can be found at the LHC@home message board.
[2025-06-04 04:44:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:44:07] Checking for apptainer binary...
[2025-06-04 04:44:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:44:07] Running /usr/bin/apptainer --version
[2025-06-04 04:44:07] apptainer version 1.4.1-1.el9
[2025-06-04 04:44:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:44:07] c6-1-26-3.aglt2.org
[2025-06-04 04:44:07] apptainer works
[2025-06-04 04:44:07] Set ATHENA_PROC_NUMBER=12
[2025-06-04 04:44:07] Set ATHENA_CORE_NUMBER=12
[2025-06-04 04:44:07] Starting ATLAS job with PandaID=6678285686
[2025-06-04 04:44:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:37:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:37:31]  mtime=0
[2025-06-04 05:37:31]  protocol_id=None
[2025-06-04 05:37:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:37:31]  replicas=None
[2025-06-04 05:37:31]  scope=mc23_13p6TeV
[2025-06-04 05:37:31]  status=None
[2025-06-04 05:37:31]  status_code=0
[2025-06-04 05:37:31]  storage_token=
[2025-06-04 05:37:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678285686/log.45006595._050895.job.log.tgz.1
[2025-06-04 05:37:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/03/log.45006595._050895.job.log.tgz.1
[2025-06-04 05:37:31]  workdir=None
[2025-06-04 05:37:31] ]
[2025-06-04 05:37:31] 2025-06-04 09:37:07,795 | INFO     | monitor loop #240: job 0:6678285686 is in state 'stageout'
[2025-06-04 05:37:31] 2025-06-04 09:37:07,815 | WARNING  | aborting job monitor tasks since payload process 2207034 is not running
[2025-06-04 05:37:31] 2025-06-04 09:37:07,815 | INFO     | transferring file log.45006595._050895.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678285686/log.45006595._050895.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:37:31] 2025-06-04 09:37:07,816 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678285686/log.45006595._050895.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._050895.job
[2025-06-04 05:37:31] 2025-06-04 09:37:07,831 | INFO     | adding to output.list: log.45006595._050895.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/03/log.45006595._050895.job.log.tg
[2025-06-04 05:37:31] 2025-06-04 09:37:07,832 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:37:31] 2025-06-04 09:37:07,833 | INFO     | summary of transferred files:
[2025-06-04 05:37:31] 2025-06-04 09:37:07,833 | INFO     |  -- lfn=log.45006595._050895.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:37:31] 2025-06-04 09:37:07,833 | INFO     | stage-out finished correctly
[2025-06-04 05:37:31] 2025-06-04 09:37:09,790 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:37:31] 2025-06-04 09:37:09,959 | INFO     | 3175s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 05:37:31] 2025-06-04 09:37:10,324 | INFO     | monitor loop #241: job 0:6678285686 is in state 'finished'
[2025-06-04 05:37:31] 2025-06-04 09:37:10,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:37:31] 2025-06-04 09:37:11,239 | INFO     | PID=2200437 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 05:37:31] 2025-06-04 09:37:11,239 | INFO     | .. there are 8 such processes running
[2025-06-04 05:37:31] 2025-06-04 09:37:12,253 | INFO     | job 6678285686 has state=finished
[2025-06-04 05:37:31] 2025-06-04 09:37:12,253 | INFO     | preparing for final server update for job 6678285686 in state='finished'
[2025-06-04 05:37:31] 2025-06-04 09:37:12,254 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:37:31] 2025-06-04 09:37:12,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:37:31] 2025-06-04 09:37:12,254 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:37:31] 2025-06-04 09:37:12,254 | INFO     | job 6678285686 has finished - writing final server update
[2025-06-04 05:37:31] 2025-06-04 09:37:12,255 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:37:31] 2025-06-04 09:37:12,270 | INFO     | executing command: lscpu
[2025-06-04 05:37:31] 2025-06-04 09:37:12,344 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:37:31] 2025-06-04 09:37:12,827 | INFO     | monitor loop #242: job 0:6678285686 is in state 'finished'
[2025-06-04 05:37:31] 2025-06-04 09:37:12,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:37:31] 2025-06-04 09:37:15,331 | INFO     | monitor loop #243: job 0:6678285686 is in state 'finished'
[2025-06-04 05:37:31] 2025-06-04 09:37:15,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:37:31] 2025-06-04 09:37:16,083 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 05:37:31] 2025-06-04 09:37:16,083 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678285686/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:37:31] 2025-06-04 09:37:16,084 | INFO     | extracted standard info from prmon json
[2025-06-04 05:37:31] 2025-06-04 09:37:16,084 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:37:31] 2025-06-04 09:37:16,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:37:31] 2025-06-04 09:37:16,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:37:31] 2025-06-04 09:37:16,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:37:31] 2025-06-04 09:37:16,086 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:37:31] 2025-06-04 09:37:16,087 | INFO     | sum of square deviations: 28242390.0
[2025-06-04 05:37:31] 2025-06-04 09:37:16,087 | INFO     | sum of deviations: 1027707931.0000008
[2025-06-04 05:37:31] 2025-06-04 09:37:16,087 | INFO     | mean x: 1749028330.0
[2025-06-04 05:37:31] 2025-06-04 09:37:16,087 | INFO     | mean y: 2498410.1333333333
[2025-06-04 05:37:31] 2025-06-04 09:37:16,087 | INFO     | -- intersect: -63642621081.69036
[2025-06-04 05:37:31] 2025-06-04 09:37:16,087 | INFO     | intersect: -63642621081.69036
[2025-06-04 05:37:31] 2025-06-04 09:37:16,088 | INFO     | chi2: 1.031955832713201
[2025-06-04 05:37:31] 2025-06-04 09:37:16,088 | INFO     | -- intersect: -63642621081.69036
[2025-06-04 05:37:31] 2025-06-04 09:37:16,088 | INFO     | current memory leak: 36.39 B/s (using 45 data points, chi2=1.03)
[2025-06-04 05:37:31] 2025-06-04 09:37:16,088 | INFO     | ..............................
[2025-06-04 05:37:31] 2025-06-04 09:37:16,088 | INFO     | . Timing measurements:
[2025-06-04 05:37:31] 2025-06-04 09:37:16,088 | INFO     | . get job = 0 s
[2025-06-04 05:37:31] 2025-06-04 09:37:16,088 | INFO     | . initial setup = 2 s
[2025-06-04 05:37:31] 2025-06-04 09:37:16,089 | INFO     | . payload setup = 6 s
[2025-06-04 05:37:31] 2025-06-04 09:37:16,089 | INFO     | . stage-in = 0 s
[2025-06-04 05:37:31] 2025-06-04 09:37:16,089 | INFO     | . payload execution = 3144 s
[2025-06-04 05:37:31] 2025-06-04 09:37:16,089 | INFO     | . stage-out = 0 s
[2025-06-04 05:37:31] 2025-06-04 09:37:16,089 | INFO     | . log creation = 0 s
[2025-06-04 05:37:31] 2025-06-04 09:37:16,089 | INFO     | ..............................
[2025-06-04 05:37:31] 2025-06-04 09:37:16,178 | INFO     | 
[2025-06-04 05:37:31] 2025-06-04 09:37:16,178 | INFO     | job summary report
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | --------------------------------------------------
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | PanDA job id: 6678285686
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | task id: 45006595
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | errors: (none)
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | pilot state: finished 
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | transexitcode: 0
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | exeerrorcode: 0
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | exeerrordiag: 
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | exitcode: 0
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | exitmsg: OK
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | cpuconsumptiontime: 29975 s
[2025-06-04 05:37:31] 2025-06-04 09:37:16,179 | INFO     | nevents: 400
[2025-06-04 05:37:31] 2025-06-04 09:37:16,180 | INFO     | neventsw: 0
[2025-06-04 05:37:31] 2025-06-04 09:37:16,180 | INFO     | pid: 2207034
[2025-06-04 05:37:31] 2025-06-04 09:37:16,180 | INFO     | pgrp: 2207034
[2025-06-04 05:37:31] 2025-06-04 09:37:16,180 | INFO     | corecount: 12
[2025-06-04 05:37:31] 2025-06-04 09:37:16,180 | INFO     | event service: False
[2025-06-04 05:37:31] 2025-06-04 09:37:16,180 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 3154: 2430826, 3155: 2439767, 3157: 2439823, 3163: 2440121}
[2025-06-04 05:37:31] 2025-06-04 09:37:16,180 | INFO     | --------------------------------------------------
[2025-06-04 05:37:31] 2025-06-04 09:37:16,180 | INFO     | 
[2025-06-04 05:37:31] 2025-06-04 09:37:16,180 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:37:31] 2025-06-04 09:37:16,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,200 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:37:31] 2025-06-04 09:37:16,201 | INFO     | job 6678285686 has completed (purged errors)
[2025-06-04 05:37:31] 2025-06-04 09:37:16,202 | INFO     | overall cleanup function is called
[2025-06-04 05:37:31] 2025-06-04 09:37:17,210 | INFO     | --- collectZombieJob: --- 10, [2207034]
[2025-06-04 05:37:31] 2025-06-04 09:37:17,211 | INFO     | zombie collector waiting for pid 2207034
[2025-06-04 05:37:31] 2025-06-04 09:37:17,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:37:31] 2025-06-04 09:37:17,211 | INFO     | collected zombie processes
[2025-06-04 05:37:31] 2025-06-04 09:37:17,211 | INFO     | will attempt to kill all subprocesses of pid=2207034
[2025-06-04 05:37:31] 2025-06-04 09:37:17,438 | INFO     | process IDs to be killed: [2207034] (in reverse order)
[2025-06-04 05:37:31] 2025-06-04 09:37:17,492 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:37:31] 2025-06-04 09:37:17,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:37:31] 2025-06-04 09:37:17,501 | INFO     | did not find any defunct processes belonging to 2207034
[2025-06-04 05:37:31] 2025-06-04 09:37:17,510 | INFO     | did not find any defunct processes belonging to 2207034
[2025-06-04 05:37:31] 2025-06-04 09:37:17,510 | INFO     | ready for new job
[2025-06-04 05:37:31] 2025-06-04 09:37:17,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:37:31] 2025-06-04 09:37:17,512 | INFO     | **************************************
[2025-06-04 05:37:31] 2025-06-04 09:37:17,512 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:37:31] 2025-06-04 09:37:17,512 | INFO     | **************************************
[2025-06-04 05:37:31] 2025-06-04 09:37:17,512 | INFO     | 
[2025-06-04 05:37:31] 2025-06-04 09:37:17,526 | INFO     | architecture information:
[2025-06-04 05:37:31] 2025-06-04 09:37:17,527 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:37:31] 2025-06-04 09:37:17,543 | INFO     | cat /etc/os-release:
[2025-06-04 05:37:31] NAME="CentOS Linux"
[2025-06-04 05:37:31] VERSION="7 (Core)"
[2025-06-04 05:37:31] ID="centos"
[2025-06-04 05:37:31] ID_LIKE="rhel fedora"
[2025-06-04 05:37:31] VERSION_ID="7"
[2025-06-04 05:37:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:37:31] ANSI_COLOR="0;31"
[2025-06-04 05:37:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:37:31] HOME_URL="https://www.centos.org/"
[2025-06-04 05:37:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:37:31] 
[2025-06-04 05:37:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:37:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:37:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:37:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:37:31] 
[2025-06-04 05:37:31] 2025-06-04 09:37:17,544 | INFO     | **************************************
[2025-06-04 05:37:31] 2025-06-04 09:37:18,047 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:37:31] 2025-06-04 09:37:18,064 | INFO     | sufficient remaining disk space (76299632640 B)
[2025-06-04 05:37:31] 2025-06-04 09:37:18,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:37:31] 2025-06-04 09:37:18,064 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:37:31] 2025-06-04 09:37:18,064 | INFO     | update_server=False
[2025-06-04 05:37:31] 2025-06-04 09:37:18,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:37:31] 2025-06-04 09:37:18,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:37:31] 2025-06-04 09:37:18,065 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:37:31] 2025-06-04 09:37:18,066 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:37:31] 2025-06-04 09:37:18,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:37:31] 2025-06-04 09:37:18,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:37:31] 2025-06-04 09:37:18,398 | INFO     | all payload control threads have been joined
[2025-06-04 05:37:31] 2025-06-04 09:37:18,442 | INFO     | all data control threads have been joined
[2025-06-04 05:37:31] 2025-06-04 09:37:18,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:37:31] 2025-06-04 09:37:18,538 | INFO     | all job control threads have been joined
[2025-06-04 05:37:31] 2025-06-04 09:37:18,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:37:31] 2025-06-04 09:37:18,839 | INFO     | aborting loop
[2025-06-04 05:37:31] 2025-06-04 09:37:19,070 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,071 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,197 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,280 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,330 | INFO     | [job] validate thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,403 | INFO     | [payload] control thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,447 | INFO     | [data] control thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,543 | INFO     | [job] control thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,581 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,844 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:19,892 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:20,021 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:20,024 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:20,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:20,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:37:31] 2025-06-04 09:37:20,482 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:24,388 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:37:31] 2025-06-04 09:37:26,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202143606592)>', '<ExcThread(monitor, started 140201154311936)>']
[2025-06-04 05:37:31] 2025-06-04 09:37:27,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:37:31] 2025-06-04 09:37:27,109 | INFO     | [monitor] control thread has ended
[2025-06-04 05:37:31] 2025-06-04 09:37:31,228 | INFO     | all workflow threads have been joined
[2025-06-04 05:37:31] 2025-06-04 09:37:31,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:37:31] 2025-06-04 09:37:31,228 | INFO     | traces error code: 0
[2025-06-04 05:37:31] 2025-06-04 09:37:31,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:37:31] 2025-06-04 09:37:31,390 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:37:31] 2025-06-04 09:37:31,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:37:31] 2025-06-04 09:37:31,394 [wrapper] pilotpid: 2200437
[2025-06-04 05:37:31] 2025-06-04 09:37:31,396 [wrapper] Pilot exit status: 0
[2025-06-04 05:37:31] 2025-06-04 09:37:31,405 [wrapper] pandaids: 6678285686
[2025-06-04 05:37:31] 2025-06-04 09:37:31,456 [wrapper] cleanup supervisor_pilot 2283535 2200438
[2025-06-04 05:37:31] 2025-06-04 09:37:31,460 [wrapper] Test setup, not cleaning
[2025-06-04 05:37:31] 2025-06-04 09:37:31,465 [wrapper] apfmon messages muted
[2025-06-04 05:37:31] 2025-06-04 09:37:31,469 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:37:31] 2025-06-04 09:37:31,472 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:37:31]  *** Error codes and diagnostics ***
[2025-06-04 05:37:31]     "exeErrorCode": 0,
[2025-06-04 05:37:31]     "exeErrorDiag": "",
[2025-06-04 05:37:31]     "pilotErrorCode": 0,
[2025-06-04 05:37:31]     "pilotErrorDiag": "",
[2025-06-04 05:37:31]  *** Listing of results directory ***
[2025-06-04 05:37:31] total 392988
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 05:37:31] -rwx------. 1 boincer umatlas     37140 Jun  3 22:54 runpilot2-wrapper.sh
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 22:54 queuedata.json
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas       100 Jun  4 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:37:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 04:44 run_atlas
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas       105 Jun  4 04:44 job.xml
[2025-06-04 05:37:31] -rw-r--r--. 2 boincer umatlas 216157990 Jun  4 04:44 EVNT.45006593._002039.pool.root.1
[2025-06-04 05:37:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:44 start_atlas.sh
[2025-06-04 05:37:31] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 04:44 shared
[2025-06-04 05:37:31] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 04:44 input.tar.gz
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas         0 Jun  4 04:44 boinc_lockfile
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 04:44 pandaJob.out
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas    986774 Jun  4 04:44 agis_schedconf.cvmfs.json
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas   1603667 Jun  4 04:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:37:31] drwx------. 4 boincer umatlas      4096 Jun  4 04:44 pilot3
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 05:36 init_data.xml
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas 181053433 Jun  4 05:36 HITS.45006595._050895.pool.root.1
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas       529 Jun  4 05:36 boinc_task_state.xml
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas      1040 Jun  4 05:37 memory_monitor_summary.json
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas        95 Jun  4 05:37 pilot_heartbeat.json
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas    353496 Jun  4 05:37 log.45006595._050895.job.log.tgz.1
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas      7707 Jun  4 05:37 heartbeat.json
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 05:37 boinc_mmap_file
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas        27 Jun  4 05:37 wrapper_checkpoint.txt
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas      4476 Jun  4 05:37 pilotlog.txt
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas    333382 Jun  4 05:37 log.45006595._050895.job.log.1
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas       357 Jun  4 05:37 output.list
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas       620 Jun  4 05:37 runtime_log
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas    706560 Jun  4 05:37 result.tar.gz
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 05:37 runtime_log.err
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas       652 Jun  4 05:37 Mz6KDmKStg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBwmKDm7SAI8m.diag
[2025-06-04 05:37:31] -rw-r--r--. 1 boincer umatlas     21753 Jun  4 05:37 stderr.txt
[2025-06-04 05:37:31] HITS file was successfully produced:
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas 181053433 Jun  4 05:36 shared/HITS.pool.root.1
[2025-06-04 05:37:31]  *** Contents of shared directory: ***
[2025-06-04 05:37:31] total 389116
[2025-06-04 05:37:31] -rw-r--r--. 2 boincer umatlas 216157990 Jun  4 04:44 ATLAS.root_0
[2025-06-04 05:37:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 04:44 start_atlas.sh
[2025-06-04 05:37:31] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 04:44 input.tar.gz
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas 181053433 Jun  4 05:36 HITS.pool.root.1
[2025-06-04 05:37:31] -rw-------. 1 boincer umatlas    706560 Jun  4 05:37 result.tar.gz
05:37:33 (2196786): run_atlas exited; CPU time 30009.233154
05:37:33 (2196786): called boinc_finish(0)

</stderr_txt>
]]>

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