Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:40:23 (257698): wrapper (7.7.26015): starting
03:40:23 (257698): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 03:40:23] Arguments: --nthreads 10
[2025-06-04 03:40:23] Threads: 10
[2025-06-04 03:40:23] Checking for CVMFS
[2025-06-04 03:40:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:40:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:40:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:40:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:40:23] 2.12.6.0 709574 220470 313732 146772 0 151 32932385 32935937 12188 130560 1 369221699 99.641 358568864 26927 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 03:40:23] CVMFS is ok
[2025-06-04 03:40:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:40:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:40:23] Further information can be found at the LHC@home message board.
[2025-06-04 03:40:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:40:23] Checking for apptainer binary...
[2025-06-04 03:40:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:40:23] Running /usr/bin/apptainer --version
[2025-06-04 03:40:23] apptainer version 1.4.1-1.el9
[2025-06-04 03:40:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:40:23] c-5-6.aglt2.org
[2025-06-04 03:40:23] apptainer works
[2025-06-04 03:40:23] Set ATHENA_PROC_NUMBER=10
[2025-06-04 03:40:23] Set ATHENA_CORE_NUMBER=10
[2025-06-04 03:40:23] Starting ATLAS job with PandaID=6678363457
[2025-06-04 03:40:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:02:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:02:33]  domain=
[2025-06-04 05:02:33]  filesize=341689
[2025-06-04 05:02:33]  filetype=log
[2025-06-04 05:02:33]  guid=cb89e148-69d0-4f1e-8bc9-c3e93b23f232
[2025-06-04 05:02:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 05:02:33]  is_altstaged=None
[2025-06-04 05:02:33]  is_tar=False
[2025-06-04 05:02:33]  lfn=log.45006595._053497.job.log.tgz.1
[2025-06-04 05:02:33]  mtime=0
[2025-06-04 05:02:33]  protocol_id=None
[2025-06-04 05:02:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:02:33]  replicas=None
[2025-06-04 05:02:33]  scope=mc23_13p6TeV
[2025-06-04 05:02:33]  status=None
[2025-06-04 05:02:33]  status_code=0
[2025-06-04 05:02:33]  storage_token=
[2025-06-04 05:02:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678363457/log.45006595._053497.job.log.tgz.1
[2025-06-04 05:02:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/09/log.45006595._053497.job.log.tgz.1
[2025-06-04 05:02:33]  workdir=None
[2025-06-04 05:02:33] ]
[2025-06-04 05:02:33] 2025-06-04 09:02:12,795 | INFO     | transferring file log.45006595._053497.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678363457/log.45006595._053497.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 05:02:33] 2025-06-04 09:02:12,795 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678363457/log.45006595._053497.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053497.job
[2025-06-04 05:02:33] 2025-06-04 09:02:12,815 | INFO     | adding to output.list: log.45006595._053497.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/09/log.45006595._053497.job.log.tg
[2025-06-04 05:02:33] 2025-06-04 09:02:12,816 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:02:33] 2025-06-04 09:02:12,817 | INFO     | summary of transferred files:
[2025-06-04 05:02:33] 2025-06-04 09:02:12,817 | INFO     |  -- lfn=log.45006595._053497.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:02:33] 2025-06-04 09:02:12,817 | INFO     | stage-out finished correctly
[2025-06-04 05:02:33] 2025-06-04 09:02:13,702 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:02:33] 2025-06-04 09:02:14,497 | INFO     | job 6678363457 has state=finished
[2025-06-04 05:02:33] 2025-06-04 09:02:14,497 | INFO     | preparing for final server update for job 6678363457 in state='finished'
[2025-06-04 05:02:33] 2025-06-04 09:02:14,498 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:02:33] 2025-06-04 09:02:14,498 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:02:33] 2025-06-04 09:02:14,498 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:02:33] 2025-06-04 09:02:14,498 | INFO     | job 6678363457 has finished - writing final server update
[2025-06-04 05:02:33] 2025-06-04 09:02:14,499 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:02:33] 2025-06-04 09:02:14,513 | INFO     | executing command: lscpu
[2025-06-04 05:02:33] 2025-06-04 09:02:14,559 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:02:33] 2025-06-04 09:02:14,871 | INFO     | monitor loop #356: job 0:6678363457 is in state 'finished'
[2025-06-04 05:02:33] 2025-06-04 09:02:14,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:02:33] 2025-06-04 09:02:17,375 | INFO     | monitor loop #357: job 0:6678363457 is in state 'finished'
[2025-06-04 05:02:33] 2025-06-04 09:02:17,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:02:33] 2025-06-04 09:02:18,682 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:02:33] 2025-06-04 09:02:18,682 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678363457/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:02:33] 2025-06-04 09:02:18,683 | INFO     | extracted standard info from prmon json
[2025-06-04 05:02:33] 2025-06-04 09:02:18,683 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:02:33] 2025-06-04 09:02:18,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:02:33] 2025-06-04 09:02:18,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:02:33] 2025-06-04 09:02:18,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:02:33] 2025-06-04 09:02:18,686 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:02:33] 2025-06-04 09:02:18,686 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 05:02:33] 2025-06-04 09:02:18,687 | INFO     | sum of deviations: -1892267274.9999979
[2025-06-04 05:02:33] 2025-06-04 09:02:18,687 | INFO     | mean x: 1749025363.0
[2025-06-04 05:02:33] 2025-06-04 09:02:18,687 | INFO     | mean y: 2352773.3698630137
[2025-06-04 05:02:33] 2025-06-04 09:02:18,687 | INFO     | -- intersect: 27444183796.749313
[2025-06-04 05:02:33] 2025-06-04 09:02:18,687 | INFO     | intersect: 27444183796.749313
[2025-06-04 05:02:33] 2025-06-04 09:02:18,688 | INFO     | chi2: 1.19897218944945
[2025-06-04 05:02:33] 2025-06-04 09:02:18,688 | INFO     | -- intersect: 27444183796.749313
[2025-06-04 05:02:33] 2025-06-04 09:02:18,688 | INFO     | current memory leak: -15.69 B/s (using 73 data points, chi2=1.20)
[2025-06-04 05:02:33] 2025-06-04 09:02:18,688 | INFO     | ..............................
[2025-06-04 05:02:33] 2025-06-04 09:02:18,689 | INFO     | . Timing measurements:
[2025-06-04 05:02:33] 2025-06-04 09:02:18,689 | INFO     | . get job = 0 s
[2025-06-04 05:02:33] 2025-06-04 09:02:18,689 | INFO     | . initial setup = 2 s
[2025-06-04 05:02:33] 2025-06-04 09:02:18,689 | INFO     | . payload setup = 7 s
[2025-06-04 05:02:33] 2025-06-04 09:02:18,689 | INFO     | . stage-in = 0 s
[2025-06-04 05:02:33] 2025-06-04 09:02:18,689 | INFO     | . payload execution = 4870 s
[2025-06-04 05:02:33] 2025-06-04 09:02:18,689 | INFO     | . stage-out = 1 s
[2025-06-04 05:02:33] 2025-06-04 09:02:18,689 | INFO     | . log creation = 0 s
[2025-06-04 05:02:33] 2025-06-04 09:02:18,689 | INFO     | ..............................
[2025-06-04 05:02:33] 2025-06-04 09:02:18,797 | INFO     | 
[2025-06-04 05:02:33] 2025-06-04 09:02:18,797 | INFO     | job summary report
[2025-06-04 05:02:33] 2025-06-04 09:02:18,797 | INFO     | --------------------------------------------------
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | PanDA job id: 6678363457
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | task id: 45006595
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | errors: (none)
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | pilot state: finished 
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | transexitcode: 0
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | exeerrorcode: 0
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | exeerrordiag: 
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | exitcode: 0
[2025-06-04 05:02:33] 2025-06-04 09:02:18,798 | INFO     | exitmsg: OK
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | cpuconsumptiontime: 40347 s
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | nevents: 400
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | neventsw: 0
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | pid: 267743
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | pgrp: 267743
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | corecount: 10
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | event service: False
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | sizes: {0: 2405185, 5: 2405391, 11: 2405447, 4881: 2431444, 4883: 2440413, 4884: 2440469, 4889: 2440767}
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | --------------------------------------------------
[2025-06-04 05:02:33] 2025-06-04 09:02:18,799 | INFO     | 
[2025-06-04 05:02:33] 2025-06-04 09:02:18,800 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 05:02:33] 2025-06-04 09:02:18,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:02:33] 2025-06-04 09:02:18,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:02:33] 2025-06-04 09:02:18,822 | INFO     | job 6678363457 has completed (purged errors)
[2025-06-04 05:02:33] 2025-06-04 09:02:18,823 | INFO     | overall cleanup function is called
[2025-06-04 05:02:33] 2025-06-04 09:02:19,827 | INFO     | --- collectZombieJob: --- 10, [267743]
[2025-06-04 05:02:33] 2025-06-04 09:02:19,827 | INFO     | zombie collector waiting for pid 267743
[2025-06-04 05:02:33] 2025-06-04 09:02:19,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:02:33] 2025-06-04 09:02:19,827 | INFO     | collected zombie processes
[2025-06-04 05:02:33] 2025-06-04 09:02:19,827 | INFO     | will attempt to kill all subprocesses of pid=267743
[2025-06-04 05:02:33] 2025-06-04 09:02:20,173 | INFO     | process IDs to be killed: [267743] (in reverse order)
[2025-06-04 05:02:33] 2025-06-04 09:02:20,245 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:02:33] 2025-06-04 09:02:20,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:02:33] 2025-06-04 09:02:20,260 | INFO     | did not find any defunct processes belonging to 267743
[2025-06-04 05:02:33] 2025-06-04 09:02:20,274 | INFO     | did not find any defunct processes belonging to 267743
[2025-06-04 05:02:33] 2025-06-04 09:02:20,275 | INFO     | ready for new job
[2025-06-04 05:02:33] 2025-06-04 09:02:20,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:02:33] 2025-06-04 09:02:20,277 | INFO     | **************************************
[2025-06-04 05:02:33] 2025-06-04 09:02:20,277 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:02:33] 2025-06-04 09:02:20,277 | INFO     | **************************************
[2025-06-04 05:02:33] 2025-06-04 09:02:20,277 | INFO     | 
[2025-06-04 05:02:33] 2025-06-04 09:02:20,292 | INFO     | architecture information:
[2025-06-04 05:02:33] 2025-06-04 09:02:20,293 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:02:33] 2025-06-04 09:02:20,309 | INFO     | cat /etc/os-release:
[2025-06-04 05:02:33] NAME="CentOS Linux"
[2025-06-04 05:02:33] VERSION="7 (Core)"
[2025-06-04 05:02:33] ID="centos"
[2025-06-04 05:02:33] ID_LIKE="rhel fedora"
[2025-06-04 05:02:33] VERSION_ID="7"
[2025-06-04 05:02:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:02:33] ANSI_COLOR="0;31"
[2025-06-04 05:02:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:02:33] HOME_URL="https://www.centos.org/"
[2025-06-04 05:02:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:02:33] 
[2025-06-04 05:02:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:02:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:02:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:02:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:02:33] 
[2025-06-04 05:02:33] 2025-06-04 09:02:20,309 | INFO     | **************************************
[2025-06-04 05:02:33] 2025-06-04 09:02:20,812 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 05:02:33] 2025-06-04 09:02:20,830 | INFO     | sufficient remaining disk space (76520882176 B)
[2025-06-04 05:02:33] 2025-06-04 09:02:20,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:02:33] 2025-06-04 09:02:20,830 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:02:33] 2025-06-04 09:02:20,831 | INFO     | update_server=False
[2025-06-04 05:02:33] 2025-06-04 09:02:20,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:02:33] 2025-06-04 09:02:20,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:02:33] 2025-06-04 09:02:20,884 | INFO     | aborting loop
[2025-06-04 05:02:33] 2025-06-04 09:02:20,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:02:33] 2025-06-04 09:02:21,150 | INFO     | all job control threads have been joined
[2025-06-04 05:02:33] 2025-06-04 09:02:21,257 | INFO     | all payload control threads have been joined
[2025-06-04 05:02:33] 2025-06-04 09:02:21,765 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:02:33] 2025-06-04 09:02:21,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:02:33] 2025-06-04 09:02:21,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:02:33] 2025-06-04 09:02:21,836 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:21,889 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:21,924 | INFO     | all data control threads have been joined
[2025-06-04 05:02:33] 2025-06-04 09:02:21,951 | INFO     | [job] validate thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,155 | INFO     | [job] control thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,180 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,224 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,262 | INFO     | [payload] control thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,417 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,706 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,807 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,831 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,930 | INFO     | [data] control thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,938 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:22,968 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:23,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:02:33] 2025-06-04 09:02:24,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:02:33] 2025-06-04 09:02:24,811 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:28,325 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:02:33] 2025-06-04 09:02:28,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773557647168)>', '<ExcThread(monitor, started 139772915865344)>']
[2025-06-04 05:02:33] 2025-06-04 09:02:28,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:02:33] 2025-06-04 09:02:28,796 | INFO     | [monitor] control thread has ended
[2025-06-04 05:02:33] 2025-06-04 09:02:33,482 | INFO     | all workflow threads have been joined
[2025-06-04 05:02:33] 2025-06-04 09:02:33,482 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:02:33] 2025-06-04 09:02:33,482 | INFO     | traces error code: 0
[2025-06-04 05:02:33] 2025-06-04 09:02:33,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:02:33] 2025-06-04 09:02:33,648 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:02:33] 2025-06-04 09:02:33,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:02:33] 2025-06-04 09:02:33,653 [wrapper] pilotpid: 261300
[2025-06-04 05:02:33] 2025-06-04 09:02:33,655 [wrapper] Pilot exit status: 0
[2025-06-04 05:02:33] 2025-06-04 09:02:33,664 [wrapper] pandaids: 6678363457
[2025-06-04 05:02:33] 2025-06-04 09:02:33,711 [wrapper] cleanup supervisor_pilot  544681 261301
[2025-06-04 05:02:33] 2025-06-04 09:02:33,714 [wrapper] Test setup, not cleaning
[2025-06-04 05:02:33] 2025-06-04 09:02:33,717 [wrapper] apfmon messages muted
[2025-06-04 05:02:33] 2025-06-04 09:02:33,720 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:02:33] 2025-06-04 09:02:33,723 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:02:33]  *** Error codes and diagnostics ***
[2025-06-04 05:02:33]     "exeErrorCode": 0,
[2025-06-04 05:02:33]     "exeErrorDiag": "",
[2025-06-04 05:02:33]     "pilotErrorCode": 0,
[2025-06-04 05:02:33]     "pilotErrorDiag": "",
[2025-06-04 05:02:33]  *** Listing of results directory ***
[2025-06-04 05:02:33] total 389228
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:22 queuedata.json
[2025-06-04 05:02:33] -rwx------. 1 boincer umatlas     37140 Jun  4 01:24 runpilot2-wrapper.sh
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas       100 Jun  4 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:02:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 03:40 run_atlas
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas       105 Jun  4 03:40 job.xml
[2025-06-04 05:02:33] -rw-r--r--. 2 boincer umatlas 215638246 Jun  4 03:40 EVNT.45006593._002141.pool.root.1
[2025-06-04 05:02:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 03:40 start_atlas.sh
[2025-06-04 05:02:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 03:40 shared
[2025-06-04 05:02:33] -rw-r--r--. 2 boincer umatlas    508888 Jun  4 03:40 input.tar.gz
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas         0 Jun  4 03:40 boinc_lockfile
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas      2526 Jun  4 03:40 pandaJob.out
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas    986745 Jun  4 03:40 agis_schedconf.cvmfs.json
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas   1603667 Jun  4 03:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:02:33] drwx------. 4 boincer umatlas      4096 Jun  4 03:40 pilot3
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas      6671 Jun  4 05:00 init_data.xml
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas        95 Jun  4 05:01 pilot_heartbeat.json
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas       529 Jun  4 05:01 boinc_task_state.xml
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas 177451717 Jun  4 05:01 HITS.45006595._053497.pool.root.1
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas      1038 Jun  4 05:02 memory_monitor_summary.json
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas    341689 Jun  4 05:02 log.45006595._053497.job.log.tgz.1
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas      7714 Jun  4 05:02 heartbeat.json
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas        27 Jun  4 05:02 wrapper_checkpoint.txt
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 05:02 boinc_mmap_file
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas      4353 Jun  4 05:02 pilotlog.txt
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas    475895 Jun  4 05:02 log.45006595._053497.job.log.1
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas       357 Jun  4 05:02 output.list
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas       620 Jun  4 05:02 runtime_log
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas    839680 Jun  4 05:02 result.tar.gz
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas      8646 Jun  4 05:02 runtime_log.err
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas       649 Jun  4 05:02 8alNDmmmvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCnaKDm0P1Jsm.diag
[2025-06-04 05:02:33] -rw-r--r--. 1 boincer umatlas     21033 Jun  4 05:02 stderr.txt
[2025-06-04 05:02:33] HITS file was successfully produced:
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas 177451717 Jun  4 05:01 shared/HITS.pool.root.1
[2025-06-04 05:02:33]  *** Contents of shared directory: ***
[2025-06-04 05:02:33] total 385228
[2025-06-04 05:02:33] -rw-r--r--. 2 boincer umatlas 215638246 Jun  4 03:40 ATLAS.root_0
[2025-06-04 05:02:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 03:40 start_atlas.sh
[2025-06-04 05:02:33] -rw-r--r--. 2 boincer umatlas    508888 Jun  4 03:40 input.tar.gz
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas 177451717 Jun  4 05:01 HITS.pool.root.1
[2025-06-04 05:02:33] -rw-------. 1 boincer umatlas    839680 Jun  4 05:02 result.tar.gz
05:02:35 (257698): run_atlas exited; CPU time 40469.864613
05:02:35 (257698): called boinc_finish(0)

</stderr_txt>
]]>

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